Daphnia pulicaria: 124344093
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Entry
124344093 CDS
T08670
Name
(RefSeq) rap guanine nucleotide exchange factor 4-like isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
dpz
Daphnia pulicaria
Pathway
dpz04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
124344093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124344093
Membrane trafficking [BR:
dpz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
124344093
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
Translat_reg
Motif
Other DBs
NCBI-GeneID:
124344093
NCBI-ProteinID:
XP_046653484
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All DBs
Position
6:12586258..12616361
Genome browser
AA seq
1352 aa
AA seq
DB search
MTSDDLLMTEPSVPMDRLSSCSLDSIIGYLDQLLGRNHVEEPVDQVVIRSRSPSPTRIQS
SDSSSGHPKQGSIRRKMLSSSSDPVRSNFTQQPDDEEAIQRVMDLSFASVFEMPSSSLSG
HSPSMPAVRPVIGCQKVMTVVTESIDPPESLDSGVESNKSDDEAQHSGDSEPRICASLGD
KGRNYAIPLHQHDYQNLIGSPFQQQQQRRSAAARRNHGQGSSSSNSRAAGRANRNRQDHE
NNPLNSKNSASASAGKDDKFYEICLGHLCWQMEAGNSAAGTGLGFDRWISIFSLQKHQDE
LIQLSGNTGSPSSPSSASPANHRKHSHHHHNHQLPQPPTQQQQQQQQLHHQGGKRQGQRH
HSTGGMSSRQGSQENNNSANNGRSSSTSGGLGIPSRDPPAVGDANVNCAKSPTTSPQRQE
RNPSVVSTTLAADGGVLTASGNGRSNPSPPSNAQQSAASTNAGQPSTGPTGPNSNSQIAP
LNLSPSERAMMMGKVLKTLIMAASSASPASALIRDRKVPGRGTVRHCLVGTEMVDWLLGL
SPEVHSRAQASAMWQVLLDEQVILALSKEHQFKDKFVFYRFHEDAEGRGDGPAGRKPGQD
AVRDAQQKKDEVISTLTQLAPDAVLKAILRKPTHDRSPDDLEIIYEELVHIRALSHLSTT
VKRELANIIVFESHPRAETVLFNQGDEGVSWYVILKGSVNVVIHGKGVVTTLQDGDDFGQ
LALINNAPRAATIITREDGCQFLRVDKDDFNRILRDVEANTVRLKEHGRDVLVLEKVSAN
PSAAHRHSASSHYKYKYTVMAGMPQKMLEHLLETRLDARHLSVRDEDIIRPYSSATDMFL
DDFLLTHIMFMPTHQLITELMRNYRIESPTQDKEFVVASKSRVVNFVYQWVTSIRDPVFD
ETITHSFFEQLHSEVHADARLYHTLREEAAMLDHVQELLGEYRAARQQGGSLATLTWTLP
AGGQSVVLFSAVNAAATAAAGNRKGSGESNAASAFSAEKRRPIRADDDIIFRVYCADHTY
CTLRQPVNATAETIKLNAADKLGLRHEELVLAEIKSNGEKSVIADTEVSIATCLSINGRI
FVSPKDHLDAMTVLPDQEGPSDGTCNELEMFSTRELAYYITLIDWDLFCSVHEYELLYHV
AGAQPFRKIKSNLDLFLRRFNEIQYWVVTEICLANTLGKRVQLLRKFIKLAAYCKEFQNL
NAFFALVMGLSNVAVSRLTQTWERLPSKLRKMFTEFDGLIEPSRNHRAYRIAVGKLQPPI
LPFMPLLLKDMTFTHEGNRTLLDSAGLINFEKMHMLAQTMRTLRYCRSRQLLLQPPTPRS
EQEVRNYIRNLRVIDNQRILTGLSQRLEPKRA
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtgacgatttgttgatgacggagccgtcggtcccaatggaccggctgtccagc
tgctcgctggacagcattatcggttatctggatcaacttttgggacggaatcatgtggag
gagccggtcgatcaagtcgtgatacgatcccgctcaccgtcgccgactcgaattcagagc
agcgacagcagcagcgggcatccgaaacagggcagcatccggcggaagatgctgagctcc
tcatcggatcccgttcgatccaatttcacccagcagccagatgatgaagaagccatccaa
cgagtgatggacctgtctttcgcttccgtcttcgaaatgccgtcctcctccttgtccggc
cattcgcccagcatgcccgccgtccgcccagttattggatgtcaaaaagtgatgactgtc
gtgaccgagtcgatcgatccgcccgaatcgctcgacagcggcgtcgagagtaacaaatcg
gacgacgaggcccagcattccggcgactccgagccgcggatttgcgccagtctgggcgac
aagggccgcaactacgccatcccgttgcatcaacacgattaccaaaacttgatcggctcg
ccattccagcagcaacagcagcggcgatctgctgctgcccgcaggaatcacggacaaggg
tcgtcgtcgtccaatagccgagctgctggtcgggcgaatcgaaaccgtcaggatcacgag
aataatccgttgaatagcaagaacagcgcgtcagcgtcggctgggaaagacgacaagttt
tacgagatctgcttgggtcacttgtgctggcaaatggaagccggaaacagcgcggccgga
actgggctcggctttgatcgatggatctccattttctcgttgcagaaacatcaggacgag
ttgattcagttgtcgggtaacaccggcagcccgtcttccccctcctcggcatcgccggcc
aatcaccgcaagcacagccaccaccaccacaaccaccagctaccgcaaccgcccacacaa
caacaacaacaacaacaacaattgcatcatcagggtggcaagaggcaggggcaacggcat
cacagcaccggagggatgagcagtcgacaaggatcgcaggaaaacaacaactcagcgaat
aatggaaggagcagttcgacttcgggcggattggggatcccctcgagagatccgccggcg
gtgggtgacgccaacgtcaactgcgccaagtctccgacaacgtcgccgcagcgccaggaa
cgcaacccgtccgtcgtcagcactacactggccgccgacggaggcgtcttgacggccagt
ggcaacggccgtagcaacccatcgccgcccagtaatgcccagcaatcagcggcctccacc
aatgccgggcaaccttcaaccggaccaacgggacccaacagcaacagccaaatcgctccg
ctaaatttgtcgcccagcgagcgggccatgatgatgggcaaggttttgaaaacgctcatc
atggcggcttcctccgcgtcgcccgcttccgccctcattcgtgaccgcaaagtgcccgga
cggggcacagtccgtcactgtctggtcggcactgaaatggtcgactggctcctcggtctc
agtcccgaagtgcacagccgggcccaagcctcggccatgtggcaggttctgctggacgag
caagtcattctagccctctcgaaggagcaccagttcaaagacaagtttgtcttctatcgg
ttccacgaagacgccgagggtcgcggtgacgggccggccggccgcaagcccggccaggac
gctgtgcgcgacgctcaacagaaaaaggacgaagtcatctcgacgttgacacaactggcg
cccgacgccgtccttaaagccattctacgaaaaccgactcacgatcggtcccccgacgac
ctggaaatcatctacgaggaattggtacacatcagggccctgtcgcatctgtcaaccacc
gtcaagcgagagctggctaatatcatcgtcttcgaatctcatcccagagccgaaaccgtc
ctgtttaatcaaggagacgagggcgtgtcgtggtacgtgatcctgaaaggctccgtcaac
gtcgtcatccacggcaagggcgttgtcacgacgctgcaggacggcgacgatttcggccag
ttggcgctcatcaacaatgcaccgagagcggcgacgatcatcacgagagaagacggttgt
cagttcctccgcgtagacaaggacgacttcaaccggatcctgcgcgacgtcgaagccaac
acggtccggctcaaggagcacgggcgagacgtcctcgtcctggagaaggtcagcgccaac
ccgagcgcagctcatcgacattccgcctcgtcgcactacaagtataagtacacggtgatg
gccggcatgccgcagaagatgctggaacacttgctggaaacgcggctggatgcgcgacac
ttgagcgtccgtgacgaggacataatccgcccttactcgtcggccaccgacatgttcctc
gacgacttcctcttgacgcacatcatgttcatgccgacgcaccagctcatcacggagctc
atgaggaattaccggatcgagtcgccgacgcaggacaaggaattcgtcgtggccagcaag
tcgcgcgtcgtcaatttcgtctaccagtgggtcaccagcatccgcgatcccgtctttgac
gagaccatcacccactccttttttgagcaattgcacagcgaagtccacgccgacgcccgg
ctctaccacacgctacgggaagaggctgccatgctggatcacgtccaagagctcttaggc
gaataccgggccgccagacaacaaggtggttctttggccactttaacgtggactttgccg
gctggaggacaatcggtcgtcctcttttcggctgtcaacgccgcggccacggcagcggct
ggcaacaggaagggcagcggcgaatcgaacgcggccagtgcctttagcgcggagaagcgt
cgccccatccgcgccgatgacgatatcatcttccgggtctactgcgctgaccacacttat
tgcacgttgcgacagcccgtcaacgccacggcggagaccatcaaactcaacgcggccgac
aagttaggattacgtcacgaagaactcgtcttggctgaaatcaaatccaacggtgaaaag
tcggtgattgccgacactgaggtcagcatcgccacctgtttgtccatcaacggacggatc
tttgtttcgccgaaagatcaccttgacgccatgacggtgctgccggaccaagaagggcct
tccgatggaacatgcaatgagctggagatgttcagcacgcgagaattggcttactacatc
acgctgatcgattgggatctcttctgttcggttcacgagtatgagctgctgtatcacgtc
gccggagcgcaaccgttccgcaaaatcaagtccaacctggatctgtttttgcgtcgcttc
aatgaaattcaatactgggtcgtcacagagatttgcttggccaatacgctgggaaagaga
gtccaactcttgcgcaagttcatcaaattagccgcctattgcaaagagttccagaatttg
aacgctttctttgcactcgtcatgggtttgagtaacgtggccgtcagtcgtctgactcag
acctgggagcgtcttccatccaagttgaggaaaatgtttaccgagtttgacggtttgatt
gaaccatcgcgcaatcaccgggcctaccggattgccgtggggaaattgcagccgcccatt
ctaccgttcatgcctttactcctgaaagatatgacattcacacacgagggtaaccggact
ctactggacagcgccggactcatcaatttcgagaagatgcacatgctggcgcaaacgatg
cgcactctccgctactgccgaagtcggcaactactgcttcagccgccaacgccgcgtagc
gagcaagaagtccgcaactacattcgcaacctgagggtcatcgacaaccagcgcattctt
acgggtctctcgcagcgactcgagccgaaacgggcctaa
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