Daphnia pulicaria: 124352562
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Entry
124352562 CDS
T08670
Name
(RefSeq) isoleucine--tRNA ligase, mitochondrial-like isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124352562
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dpz01007
]
124352562
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpz03016
]
124352562
Enzymes [BR:
dpz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
124352562
Amino acid related enzymes [BR:
dpz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
124352562
Transfer RNA biogenesis [BR:
dpz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
124352562
Prokaryotic type
Other AARSs
124352562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
tRNA-synt_1g
Anticodon_1
tRNA-synt_1_2
tRNA-synt_1e
DUF4004
VHP
Motif
Other DBs
NCBI-GeneID:
124352562
NCBI-ProteinID:
XP_046658056
LinkDB
All DBs
Position
8:5721325..5725832
Genome browser
AA seq
982 aa
AA seq
DB search
MPAWDTGIYSRNWDLQKNDCVIVCTIFSASSSTSVLLPKTGFPLRISSVQRKERDLFIMK
RASFDQLYKWQRKNLQNEDEFILHDGPPYANGKPHMGHALNKILKDILSRYKLLSGKLVH
FVPGWDCHGLPIELKALETHDVLNSNSLEIRQRAKLFALDTIKCQKEAFSRWGVMADWDS
GCYFTFTPSYVTSQLKIFCDLYDKGLVYRDYKPVYWSPSSRTALAESELEYNVNHVSSSI
YLKITLQTPFPECIADSSKEAPVYLVVWTTTPWTIPANQAVCYNPDKKYCLVRCKSHKDY
KYLVIALELYHSLEQLWSCHFTLIKEFDGDIFNGHYYSHPFRKNKSMPLLPGNHVSVKKG
TGFVHTAPAHGPDDFLVALQHKMPILNLVDEDGKYSADAGSDLCGNDVLDKGQDIVLKLL
QNDVIFKENFTHSYPYDWRTKLPVILRASLQWFIDTDKIKTKSIEAMKDVSVVPENFEKP
MLTQLATRPYWCISRQRSWGVPIPVFYRSLSPTKEAILHRDIVEKVCKITLEKGIDEWWR
MSPEDLIGEELIKKLDLIPGQIFKGMDIMDIWFDSGVSWNSVLPQGKQADFYMEGIDQFG
GWFQSSLLTSVASSGHAPYKNIFVHGFVLDHEGRKMSKSLGNVIDPHLILDGDGKKQPAV
GIDALRWWVASHVSANGGNISVSIHSIQQASEDIQKMRSVLRFLLGNLNAVTCSQFKQTN
PTTLGLTDQYMLHLLSEFAENALSAYQEMNFRKVTSLVSAFINTSVSAFYCSIVKHRLYC
HSLTSEDRLSALFVLSEILDQITLIIAPILPHLTEEIEMHHPWRAADNGGLFRNRKFADM
KKSDLSDVVDQIHPSLSLRQSVNKAIGRLNTQEWNVEISAFDSRDLHLLQMLQSEEKTHD
SALCDLLQVSMVTLLGKNDEDSIAKELDNSNVDDSFTKIEFQHFGRIQITLSKTKLALCS
RCRRYTSSDGNLCCSCLKVCAL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgtgggatactgggatctattcgagaaattgggatctgcagaaaaatgactgt
gttattgtgtgtactattttctcggcgtccagcagtaccagtgtcttgttgcccaaaacc
ggctttcctcttcggataagttctgttcaacgaaaggaacgtgacctgtttattatgaag
agagcatcctttgatcaattatataaatggcagagaaaaaatttgcagaatgaagatgag
ttcattttgcatgatggcccaccatatgctaatggaaagccacatatgggacatgcgttg
aataaaatattaaaggatatattgtcacgatataaactgctttctggaaaattagtgcat
tttgttccaggatgggattgtcatggacttcccattgaattaaaagctttggaaacacat
gatgtactcaattcaaattcattggaaatacggcagagagctaaattatttgccctggac
accattaagtgccaaaaagaagccttctctcgttggggagttatggctgattgggatagt
ggctgctactttacatttacaccaagctatgtcacttcacaacttaaaattttctgtgac
ctttatgataaaggacttgtatacagagattataaacctgtctattggtctccatcctca
aggactgctcttgctgaatctgagttggaatataatgtgaatcatgttagctcttctatt
tacctgaagataaccctgcaaacaccatttcctgaatgtatagctgatagttctaaagaa
gctcctgtttacttggtagtgtggactacaacaccatggacaataccagcaaatcaagct
gtttgttataatccagacaagaaatactgccttgtgaggtgtaaatctcataaagattat
aagtatttggtaattgcattggagctctaccattctcttgagcagttatggtcttgtcat
ttcactctgatcaaagaatttgatggggacatctttaatggtcattactattcacatcca
tttcgaaaaaataagagcatgcccttgttaccaggaaatcatgtttctgtgaaaaaagga
acaggttttgttcatactgcgccagcacacggaccagatgacttcttggtagctttgcag
cataaaatgccgatcttaaatttggtagatgaagatggaaaatactctgcagatgctggg
agtgacttgtgtgggaatgatgtattagataagggccaagatattgtcctaaaattatta
caaaatgatgtaatattcaaagaaaatttcacgcacagctatccttatgattggaggaca
aaactcccagttattttgagggcgagccttcaatggttcattgataccgacaaaataaaa
accaagtcaattgaagctatgaaagatgtttcggttgttccagaaaatttcgaaaagccc
atgcttacccaactggccactagaccatattggtgtatttcaaggcagcgctcatgggga
gttccaattccagttttctaccgttcgctgtctcctacgaaagaagctattttacataga
gatattgttgaaaaggtgtgcaaaataacgttggaaaaaggaattgatgaatggtggcgc
atgagccctgaagatctaattggagaggaactgataaaaaagttggatttaattcccggt
caaatatttaagggcatggacattatggatatatggttcgatagtggagtttcatggaat
tcagttttgccacaagggaagcaagctgatttctacatggaagggatagatcaatttgga
ggatggttccagtcatcgcttttgacgtcagtagcaagctctggtcatgccccgtacaaa
aatatatttgtacacggattcgtcttagatcacgaaggcagaaaaatgtctaaatcccta
ggtaatgttattgatccacatctgattcttgatggtgatgggaaaaaacagcctgctgtc
ggcatcgatgccttgcgttggtgggtcgctagtcatgtgtctgcaaatggcggtaacata
tcagttagtatccattcaattcaacaagcttcagaggacattcaaaagatgcgttcagtt
ttacgttttctattgggaaatctcaatgctgttacttgctcccaatttaaacaaactaat
cccacaactttgggcttaactgatcagtacatgcttcaccttttatctgaattcgccgaa
aatgcgttgtcggcataccaagaaatgaattttagaaaagtcacaagcttggtttccgct
ttcatcaatactagtgtttctgccttttattgcagcattgtgaaacatcgtctttattgc
cacagtcttacaagtgaggatcgactttccgctttatttgtactcagtgaaattctggat
cagatcaccttaataattgctcctatccttccacatttgacggaagaaattgaaatgcat
catccatggcgagcagcagataatggaggtttatttcgcaatcggaaattcgcggacatg
aaaaaatctgatttatctgatgtagttgatcagattcatccgtcattgtcattacgccag
tcagttaacaaagcgattggtcgtttgaacactcaagaatggaatgttgaaatttcggct
tttgattctcgagatctccaccttttgcagatgttacaatcagaagagaaaactcacgat
tcagcattgtgcgaccttctccaagtatcaatggtgactttgcttggcaaaaatgatgag
gattccatcgcaaaggagctggacaattccaatgtagatgacagttttacaaaaattgaa
tttcaacattttggtcgaattcaaatcactttatctaaaacaaagttagctctttgctct
cgctgtaggagatacacttcctcagatggcaatttatgttgttcatgcttgaaagtttgt
gccttgtaa
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