Draconibacterium halophilum: G0Q07_09735
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Entry
G0Q07_09735 CDS
T06417
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
drc
Draconibacterium halophilum
Pathway
drc03030
DNA replication
drc03410
Base excision repair
drc03420
Nucleotide excision repair
drc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
drc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G0Q07_09735 (ligA)
03410 Base excision repair
G0Q07_09735 (ligA)
03420 Nucleotide excision repair
G0Q07_09735 (ligA)
03430 Mismatch repair
G0Q07_09735 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
drc03032
]
G0Q07_09735 (ligA)
03400 DNA repair and recombination proteins [BR:
drc03400
]
G0Q07_09735 (ligA)
Enzymes [BR:
drc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
G0Q07_09735 (ligA)
DNA replication proteins [BR:
drc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G0Q07_09735 (ligA)
DNA repair and recombination proteins [BR:
drc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
G0Q07_09735 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G0Q07_09735 (ligA)
MMR (mismatch excision repair)
DNA ligase
G0Q07_09735 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G0Q07_09735 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
BRCT_2
zf-C4_Topoisom
Auto_anti-p27
RNA_ligase
SepF
zf-NADH-PPase
5_3_exonuc
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QIA07990
UniProt:
A0A6C0RCC9
LinkDB
All DBs
Position
complement(2396024..2398030)
Genome browser
AA seq
668 aa
AA seq
DB search
MSSEQDIQRIEDLQAELAEHNYKYYVLAQPSISDFDFDMKLKELERLEKQYNINDPNSPT
QRVGSDLSSDFKQVTHQYNMLSLSNAYSQEELKDFDNRIQKIIGTDDFEYACELKFDGSS
ISLSYENGELVRAVTRGDGVKGDDVTANVRTIQSVPLKLRGNDYPDSFEIRGEILMPFEV
FNNLNAELEKAGEPLLANPRNTAAGTLKMKNSSIVASRKLDAYLYYVLGENLPEDGHYES
LQKAREWGFKISEHTQLCKNIDDVFAFIERWDTERFSLPVATDGIVIKVNSRRLQKNLGF
TAKSPRWAIAYKFKAESVSTLLKSVSYQVGRTGAVTPVANLEPVLIAGTIVKRASLHNAD
IINNLDLHIDDTVFVEKGGEIIPKITGVDPAKRHPMFQPVQFIETCPECGTKLIRKEGEA
AHYCPNEDACPPQIKGKMEHFVSRKAMDIDGIGQETVDLLYNEGLAKNITQLYQLQKKQL
LNLERMADKSAQRILDGLEASKEVPFERVLFALGIRFVGETVAKTLVKKLHTIENIQQQT
KEQLVEIDEIGDRIAESVVDWFSNEEHLQFIENLKAYGLRFSISEDQLEGQTNKLEGLSI
VISGTFEQNSRDELKKLIEQNGGKNVGSISKKTSYMLAGSNVGPSKLQKVEKLGIPMISE
KDFLKMIE
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaacaagacatccaacgaattgaagatttgcaggccgaactggccgaacac
aactataaatattacgtattggcgcaaccatctatcagtgattttgatttcgacatgaaa
ttaaaagagctggaacgccttgagaaacaatacaatattaacgaccctaactcgccaaca
cagcgcgtaggaagcgatttaagttcagactttaagcaggtaactcatcagtacaatatg
ttgtcgctatcaaatgcatactcgcaagaggagctaaaagatttcgacaaccgcattcag
aaaattattggtaccgatgattttgaatacgcttgtgagttaaaattcgatggctcgtcg
attagcctaagctatgaaaatggcgaactggtgcgtgccgtaactcgtggcgacggagtg
aaaggtgatgatgtaactgcaaatgtgcgtaccatccaatcggtacccttaaaattacgc
ggaaacgattatccggatagttttgaaattcgcggcgagattttgatgccttttgaagta
ttcaacaacctaaatgctgaactggaaaaagctggcgaaccgctattggcaaatcctcga
aacacagcggcaggaacactaaaaatgaaaaactcatcgattgttgcctcgcgaaaactg
gatgcctatttgtattacgtacttggcgaaaatttaccggaagacgggcattacgaaagt
ctgcaaaaagcacgcgaatggggatttaaaatttcggagcacacgcaattgtgtaaaaat
attgatgacgtatttgcttttatcgagagatgggacaccgaacgattttcactgccggtt
gccaccgacggaattgtgattaaagtaaattcgcggagattacaaaagaacctcggtttt
accgccaaatcgccacgctgggctattgcctacaagtttaaagccgagagtgtttctact
ctgctaaaatcggtttcgtaccaggtagggcgaacaggagctgtaacgccggtggctaat
ttagaaccggttttaattgccggaaccattgtaaaacgcgcatcgctgcacaatgctgat
attatcaataatctggatctgcatattgatgacactgtttttgtggaaaaaggaggcgag
attattccgaaaatcacgggagttgatcctgccaaacgacatccgatgtttcagccggtg
cagtttattgaaacatgccccgagtgcggaaccaaactaattagaaaagaaggtgaagct
gcccattattgtccgaatgaagatgcctgtccgccacaaattaaaggcaagatggagcat
tttgtgagccgaaaggcaatggacattgatggcattgggcaggaaactgttgacttgctt
tacaacgaaggtttggcaaaaaacattacccagctctaccaattgcaaaaaaagcaactg
ttaaaccttgagcgaatggcagataaatcggcacaacgaattctcgatggtttggaagct
tcaaaagaagttccgttcgagcgggtactttttgcgctgggaattcgttttgttggagaa
acagtagccaaaacgctggtaaaaaagctgcatacaattgaaaatattcagcagcaaacc
aaagaacagttggtagaaattgatgaaattggcgaccgcattgcggaaagtgttgtggat
tggttttcgaacgaagaacatttacaatttatcgaaaacctgaaagcatacggacttcgg
ttttccatcagcgaagaccagctggagggacaaaccaacaaactggaaggtttgagcatt
gttatttcgggaactttcgagcaaaattcgcgcgatgagcttaaaaaactgattgagcaa
aacggagggaaaaacgtgggttccatttcgaaaaaaacaagttatatgcttgccggaagt
aatgttggtcccagcaagcttcaaaaagttgagaagttgggtattccaatgatcagtgag
aaagatttcttaaaaatgatcgaatag
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