Danio rerio (zebrafish): 100001425
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Entry
100001425 CDS
T01004
Symbol
ercc1
Name
(RefSeq) DNA excision repair protein ERCC-1
KO
K10849
DNA excision repair protein ERCC-1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03420
Nucleotide excision repair
dre03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100001425 (ercc1)
03460 Fanconi anemia pathway
100001425 (ercc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dre03400
]
100001425 (ercc1)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
100001425 (ercc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad10
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-GeneID:
100001425
NCBI-ProteinID:
NP_001096608
ZFIN:
ZDB-GENE-040426-2606
Ensembl:
ENSDARG00000031680
UniProt:
Q6NY87
LinkDB
All DBs
Position
9:complement(32674676..32684008)
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AA seq
342 aa
AA seq
DB search
MEKKKFNINLDDSAFSKDRSPAKVSLFKSKNDHVEASSVPAPGQPLSYAEFVVQNKHKGH
QGAHGSEKQTSAAQSRNNAPGQSSANIAVIESVNTSSTDSEKPETEQQGLSEGPTEDQTK
GEGQSSESFVVPPHLLGSGNSIIVSPRQRGNPILKFVRNVPWEFGEVVPDYVLGRTTCAL
FLSVRYHNLNPNYVHERLKQLGQSFSLRILLVQVDVKDPHHALKELARICIMADCTLILA
WSPEEAGRYLETYKSYEKKPADLLKEQVEKNYLSQVTDCLTTVKSVNKTDAMTLLSTFSS
LEGIIKASKEELVLCPGLGPQKARRLYDVLHQPFIKTKKKES
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaagaagtttaatatcaatttggacgattcagcgttctcaaaggacagaagt
ccggcgaaggtgtctttgttcaaatccaaaaatgatcacgtagaggcctcatctgttcca
gctcctggccaaccactgtcctatgcagagtttgttgttcagaacaaacacaagggccat
cagggagcccatggatcagagaaacaaacatctgctgcccaaagtagaaataacgctcca
ggacaaagcagtgcaaacatagctgtaattgaatcagttaatacgtcctccacagactca
gaaaaacctgagactgaacagcagggtctatcagagggacctacagaagatcagaccaaa
ggggaaggtcagagttcagagagttttgtggttcctcctcatctcttaggatctggaaac
agtattattgtcagtcctcgacagaggggcaaccctatcctgaaatttgtgagaaatgtt
ccttgggagtttggagaggtggtgccagactatgttttaggaaggacaacatgtgcactt
tttctcagtgtgcgttaccataatctgaacccaaactatgtccatgagcgtctaaaacag
ctgggccagagtttcagtctcagaattctgcttgtccaggtggacgtgaaagaccctcat
catgcactgaaagagcttgcacgaatatgcatcatggctgactgtaccctcatcttggcc
tggagtcctgaagaagcaggccgttatcttgaaacctataaatcctatgagaagaagcct
gcagatctacttaaagagcaagtagagaaaaattacctgtcccaggttacagattgttta
accacagttaagtctgtcaataagactgatgccatgactcttctgtctacgttttcttca
ttggagggcatcattaaagcttcaaaggaggaacttgttttatgtccaggactcggtcca
caaaaggcaagaaggctttatgacgtattgcatcagcccttcataaagaccaagaagaag
gaaagttga
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