Danio rerio (zebrafish): 100002627
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Entry
100002627 CDS
T01004
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor
KO
K04279
platelet-activating factor receptor
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04020
Calcium signaling pathway
dre04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100002627 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100002627 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
dre04030
]
100002627 (ptafr)
G protein-coupled receptors [BR:
dre04030
]
Rhodopsin family
Others
Platelet activating factor
100002627 (ptafr)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CitMHS
MpPF26
Tegument_dsDNA
7TM_GPCR_Srx
MutS_IV
Motif
Other DBs
NCBI-GeneID:
100002627
NCBI-ProteinID:
XP_001342372
ZFIN:
ZDB-GENE-131127-236
Ensembl:
ENSDARG00000042370
UniProt:
E7EZR6
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All DBs
Position
17:complement(27968813..27975975)
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AA seq
365 aa
AA seq
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MENMSSTKWTENTNDTEIIDSRFRYTLFPIFYGVVFVLGLIANCYALYVLHRMRESKAMN
EIRIYMTNLTVADLLFVSALPFWIDYYMHEGHWRSTEAFCRITGTFFFINTYGSILFLTV
ISINRYWAVTKPLKAASSDCWKRGAIISVLIWAFILSASIPQLTKEGIQKEQRMNRSMQR
CFEGYHYTDENTKNVLVITHFSIIGLFFLVFLMVIICNISIARALLSQPISQPRASTGRR
PGGTKRRALRMLCAVIGVFVICFLPHHVVQGPWVLSVLQLKKYWSTWTHQTLNDAHQITL
MLMGINCLLDPLVYCFATTKFRKYLENHFTKMKNRKNCSRYTLSTGISLKSRHQSIVNAV
DEEKA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacatgtcgtctactaaatggaccgaaaataccaacgacactgaaatcatcgat
tcaaggttccgttacactctctttcccattttctatggtgtggtcttcgtcttggggttg
atagccaactgctatgctctctatgtgcttcaccgcatgcgggagtctaaagccatgaat
gagattcggatctacatgaccaacttgactgtcgcagacctgttgtttgtgtctgctcta
ccgttctggattgactactacatgcatgaaggtcactggagatccacagaagccttctgt
cgtatcacaggcacatttttctttattaacacctatggctctattctattcctcactgtc
atcagcattaaccgttactgggctgttaccaaacccctaaaggcagcctcttctgactgc
tggaaacgtggagcgatcatctcagtgctcatctgggctttcatcctttcagcatcgatt
cctcaacttactaaagagggaattcagaaggaacaaagaatgaacaggtccatgcaacgc
tgttttgagggttaccactacacagatgaaaatacaaaaaacgtattggtcatcactcac
ttcagcattattggcttgttcttccttgttttcttaatggtgattatctgcaacatctcc
atcgctcgagctcttctgtctcaacccatcagtcagcctcgagccagcacaggacgacgt
cctggcgggaccaaacgaagagctttgaggatgttgtgtgccgtcattggcgtgtttgta
atctgtttcctaccccatcatgtggtgcaaggtccctgggttttgtcagtgctgcaactg
aagaagtattggtccacatggactcaccaaaccttaaacgatgcccatcagatcaccctc
atgcttatggggatcaactgtctcctagacccattggtgtattgcttcgctaccacaaaa
tttcgcaagtacctcgaaaatcatttcacaaagatgaagaataggaaaaactgctcacgt
tacacgttaagcacaggtatatcactgaagagtagacatcagagcattgtcaatgctgta
gatgaagagaaagcatag
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