Danio rerio (zebrafish): 100003587
Help
Entry
100003587 CDS
T01004
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100003587 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
100003587 (herc3)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
100003587 (herc3)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
HECT type E3
100003587 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
100003587
NCBI-ProteinID:
NP_001139096
ZFIN:
ZDB-GENE-090313-139
Ensembl:
ENSDARG00000075887
UniProt:
B8JLD4
LinkDB
All DBs
Position
1:53957944..54011373
Genome browser
AA seq
1046 aa
AA seq
DB search
MMLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGS
NSCGQLGHDKGGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGT
AEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLS
PQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLR
SQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIA
CGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPVSNIQPLCIGNAYTRTEHCT
IAKIHSGGDHNFLLLSTVEGLSCPDDFRILNTTKSIALINSESLDSWRMKLHDNSDSSIT
NDIILLLSSTACWNASFLDQSDDGHFKTNPKVPGIDFNAVRLLFETLMKPAFARLLEQIT
KSFESLLIPQLPCSPPDVEAMRIYLILSECPAFQDSKNYITLTIPLAMAILRLDANPSKV
LDNWWSLMDCTVFTRLVEMYKSIVVFLLTGGKALLMPVFLESYTSAALRLLEKLHKVNLK
AHRVEYNHFYIPDIATLVDIQEDYLKWFLRKADIKMRYPPVQGSVTLCAYPFILNAQAKT
TVLQTDAELQMQMAVSGANLHNVFMLLTMEPLLARNPFLVLHVRRNHLVSDALRELTIYN
DVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMNPIYGMFTQYSESNLLWFSDKCFV
EHNWFHLIGIICGLAIYNSTVVDLHFPLVLYKKLLEISPTLDDLKELSPTEGRSLQQLLE
FEGDVEETFCLNFAITREYYGITEVKELVQGGKTIAVDKTNRKEFVQAYLQYVFSDAVQE
QYSAFSSGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEEMEKNASYKGEFSATHPTVKM
FWEVFHEFSLEKKKQFLLFLTGSDRIPIHGMASLRIVIQSTAAEEHYLPVAHTCYNMLDM
PCYQTKETLRQRLTQAVEQYEGFSLV
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgctggggaagcagtggcgcgggtcagctaggcatcggtgcgtcagaggcg
tcagtctttgagcctaggagctgctgcgtgttcgacggccgagggcttaaagaagtggcg
tgcggcaaccagcactcgctcttcctgttgcatgatggaagcgtctacacctgcggatcc
aacagctgcggtcagctgggccacgacaagggaggaagcaggccagagttggttggcgct
ctggacgctcagaagatctccggcgtgtcatgtggtcaggctcactctctggcggtgaac
gagcagggtcaggtgtttgcgtggggagctggagacggagggcagcttggtctgggaaca
gctgaagaggcggtccgcgtgcctcggttgattaaaaagttgtgcgagcatcggatctct
caagtaatgtgtggaaaccatcactgtatagctctttcaaaagatggtcagttgttcgta
tggggagagaactcgagcggtcagctgggtttagggaagggagagccgagcactctgtct
cctcagccgctcaaatctctgtgtgggatcccactgacccagatcagcgccggaggagac
cacagcttcgccctgtccttctctggagctgtgttcgggtggggcaagaacagcgctggg
cagttgggtctcaatgacgagcaagaccgagctgttccctgccacatcaagttcctgcgc
tcacagaaggtggtttacatcagctgtggagaggagcacacggctgccctgacaaaggaa
gggggtctgttcacatttggaaatggttcaaaaggacagctgggccatgactccaccaga
aacgagcctcttccacgcagagttatggagctcatgggcactgaggtgtctcagatcgct
tgtgggcggaaccacacccttgcattcgtgccctccaccggtctgatatatgcttttggc
tgcaacactcagggccagctcggtacaggcataagaggaagcgccaagagccccgttcct
gtcagtaacatccagcccctttgcattggaaatgcatacacaagaacagagcactgcacc
attgcgaagattcacagtggaggagatcataatttcctgttgttgtcgactgtggagggt
ttgtcttgtcctgatgatttccgcattctgaacaccaccaaaagcatcgctctgattaat
tctgagagtctggacagctggaggatgaagcttcatgacaacagcgattccagcatcact
aatgacatcattctgctgttgtcctcgactgcatgttggaatgccagctttttggaccaa
agtgatgacgggcatttcaaaaccaaccccaaagtcccaggcatcgatttcaatgctgtt
cggctgcttttcgagaccctgatgaaaccagccttcgctagacttttggagcagatcaca
aagagctttgagagtctcctgatcccccagctgccctgttctcctcctgacgtggaagcc
atgcggatctacctgatcctgtctgaatgtcccgctttccaggactccaaaaactacatc
actctcaccatccctctcgccatggccatcctcagactggacgccaacccaagcaaagtg
ctcgataactggtggtcgctgatggactgcacggtgtttaccagattagtggagatgtac
aaaagcatcgttgtgtttctgttgaccggcgggaaagctcttctgatgcctgtgtttctg
gagagctacaccagcgccgctttgcgactgctggagaaactacacaaggtcaacctgaaa
gcccatcgtgtggaatacaaccacttttacatccccgacatcgcaaccctggtggacatc
caggaagactacctcaaatggtttctgcgcaaagctgatattaaaatgcgataccctcca
gtgcagggttctgtcacgttatgtgcctatccgttcatattgaacgcgcaagccaagaca
accgtgctgcaaacagatgctgagctgcaaatgcagatggcagtaagtggtgctaacttg
cacaacgtcttcatgctgttgaccatggagcctttgctggcgagaaaccctttcctggtg
ctccacgtacggagaaaccacttagtcagcgacgctctccgggagctcacgatctacaat
gatgtagacttgaaaaagccactcaaggtcatctttgatggagaggaagctgtggatgct
ggaggagtcaccaaggagttcttcctgctgctgctgaaagagctgatgaaccccatctac
ggcatgttcacgcagtattcagaatccaatctgctgtggttctctgacaaatgttttgtg
gagcacaattggttccacttgattggcataatctgtggtttggccatctataactccact
gtggtggacctgcactttcccctggtgctctacaagaagctcctggaaatttcgcccact
ctggatgacctgaaagaactttcgcctacagagggaaggagtttgcagcagctgctggag
tttgagggtgatgtggaggaaaccttctgtctcaactttgccatcacgagagagtattat
gggatcacggaggtgaaggagctggtgcagggaggaaaaaccatcgctgtggacaaaacc
aacaggaaggagtttgttcaggcgtatctgcagtatgtgttcagcgacgcagtacaggag
cagtattcggccttctccagtggtttcctgaaggtctgcggtggggagattctgtctctc
ttccagccctctgaactcatggccatggtggtgggcaacaacaactacaactgggaggag
atggagaagaatgcctcatacaagggcgagttttctgcaacccacccaacagtaaagatg
ttttgggaagtgtttcatgagttttccttggagaaaaaaaagcagttcttattgttcttg
acaggcagtgaccgcatccccatccacggcatggccagtttgcgcattgtcatccagtcc
acggctgcagaagagcactaccttccagtggctcacacctgttataatatgctggacatg
ccctgctaccagaccaaagagaccctgcggcagcgcctcacacaggccgtggagcagtac
gagggcttcagtctggtctaa
DBGET
integrated database retrieval system
