Danio rerio (zebrafish): 100004024
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Entry
100004024 CDS
T01004
Symbol
med13a
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13a
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
100004024 (med13a)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
100004024 (med13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
100004024
NCBI-ProteinID:
NP_001268397
ZFIN:
ZDB-GENE-070627-13
Ensembl:
ENSDARG00000053884
UniProt:
E7FCQ8
LinkDB
All DBs
Position
10:complement(32950595..33037409)
Genome browser
AA seq
2157 aa
AA seq
DB search
MSACFVPNGASLEDCHSNLFYLADLTGIKWKRYVWQGPISAPMLFPVTEEDPILCSFSRC
LKSDVLSVWRRSQRQGRRELWLFWWGDDPNFADLIHHELTAEDDGVWESGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKREHLSCSFTFFLHGDSNVCTSVEI
NQHQPVYHLSEDHLTLAQQASSPFQVILSPFGLNGTLTGQSFKLSDPPTQKLIEEWNQFY
PISPTSKESAEDKMEDIDWEDDSLAAVEVLVGGVRMVYPACLVLVPQSDIPTITQTGSSH
CTAVYSNGHQVPASNRDPAISSVTLTPPTSPEEAQTVHSHSAQKWMRLPVAMDGFSVDNT
SHHGGKIPRRMASQVVETVWQECNINRAQNKRKFSATASNGTSEEETLIKVGAWDFVDST
QRSNCNCSRHKTLKQRASSTPGQPPTAGQTQQPPIKHKAGEKPEKGDKQQKRPQTPFHHR
NSVCEDVTMETDASAGQRLALRGQESGRFPGLRPTDVGTGSKPPQLHSGAGSTVGSSGPT
EMVGSPQPPPLSPHPCERGEEPSDTIKNPSTPQHFYPPSTEPCLLPQKGPDDARLEPLTQ
PFPPAYPETLEPTPYISAAVNMDDDGSHAPWRFFNLPRRKDAEFPTPTLPGDKLREEASL
GAEGIMSVTESMAASKRLLKVSDERIQMYLQRQNQHLAAAITDGDHEPEVDPYAFVDGDV
KFTFSDKKDKAGLEREPGKKHKGEDGNAASDDAQRAAAHNRAASTSLIHDSDLAVSIKDL
DNLFNSDEDEQTPGARRAVNGADEKFGSKETKPATLDPVSCISTADLHQMFPTPPSLEQH
FMGYSPMNMGSKDGCMEPGSGLNALDGPTALGGPFKIEVEESFCSPKPSEIKDFSFVYKP
ELCQPFVGCSMFAPLKSLPSQCLPPIKLPDECVYRPSWTVGKLELLNSVPAMTIFSKDGE
NNAMEQDYIQTYTPQTHTPFLSNSAPPSNSGTSILPSPATPRFSAPTPRTPRTPRTPRGP
ASVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLILSESVMNLFKD
CNFDSCCICVCNMNIKGADVGIYINDPNMEAQYPCGCGFSAVVNRRYGNGSGLFLEDELD
IIGRGSDVSQEAEKRFEALRCISLEKTGGGGKDRVPDELISLLQDQCTNPFSPILALDPE
GLSSQGPGGTTVPPCVRVEERDFHNDCYLALEHGRQFMDNMSGGKVDEVLVKSTCLHHWA
KRSAVDVSALCSQDVLRVLLSLQPVLQDAIQKKRTVRSWGVQGPLTWQQFHKMAGRGSYG
TDESPEPLPIPTFLVGYEYDFVVLSPFGLPYWEKLLLDPFGSQRDVGYLVLCPDSDSLLT
GAKSFFRELTAVYESCKLGQHRPISKVHADGIVRVGGAAAKKLSEQPVNDWFLKAASGSS
DAFAKLKLFAQVCRHDLAPYLATQPLDSSLLIQPTPVPSSTQSSSSQSSGSASSNSQTSM
ASGGSALNNNNNSAASNSGSGLPGSTNNTPSSSSSGPQGSSIQSAKPSSFPPFGSMGVQG
NSSQSGALGQQAVTQNSSLSGDNSAINSQTQGPSEPPESTMEREKVGVPTDGDSHAITYP
PAIMIYIVDPFSYEEAEPGTSQSSKWTLGLLRCYLEMLQALPTHIRNSVFVQIVPCQYLL
QPVRSEERHLYAQHLKSLAFSVFTQCRRPLPTSTNVKSLTGFGPGLALDTSLRNPDRPEC
LRLYTPPFILAPTKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLATCTDLYGELLE
TCIISVDVPNRARRKKGSARKMGLQKLWEWCLGLVQMTSLPWRVVIGRLGRIGHGELRDW
SILLSRRNLQSVSRRLKENCKLCGISASDTPSILSACLVAMEPQGSFVIMPDSVSTGSVF
GRSTTLNMQTSQLSTPQDTSCTHILVFPTSAFVQVNSSNYTHENIDIAFNPGNDGSDPMG
GIFDLLEQENDLVDPDIINILPASPTTSPVHSPGSQYPHGGDGSKGQSTDRMESHEEAPN
ILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVSSVQSDELLHSKH
SHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPIHFVVLNQMYNFIMTML
NT seq
6474 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttgtttcgtaccgaacggggccagcttggaggactgccattccaatctattc
tatctggctgatttgacagggataaaatggaagaggtacgtttggcaaggtccgatctcg
gcacccatgctgttcccggtcaccgaggaagaccccatcctctgcagcttcagtcgctgt
ctaaagtcggatgtgctgagcgtgtggagacggagccagagacaggggcgccgggagctt
tggctcttctggtggggcgacgatcccaactttgctgaccttatccaccacgaactgaca
gcagaggatgatggcgtgtgggagagcggtctgtcctacgaatgtcgaactcttctcttt
aaggccattcacaatctgttggagagatgtctgatgaaccgcagtttcgttcgcatcgga
aaatggttcgtcaaaccctatgaaaaggatgagaagcctataaacaagagagaacacctg
tcttgctccttcacgttcttcctgcatggagacagcaatgtgtgcaccagcgtggagatc
aaccagcaccagcccgtgtaccacctgagcgaggatcacctgacactggcccagcaggcc
tccagcccattccaagtgattctgagtccatttggactgaacgggacactgaccggccag
tcctttaagctgtctgaccctccgacacagaagctcattgaagaatggaaccagttttat
cccatcagcccaacctccaaggagagcgcagaggacaaaatggaggacatagactgggag
gacgattccctggcagcagtggaagtgcttgttggtggtgtgcgcatggtatatccagca
tgcctggtgttagtcccgcagtcagacatccccactataacacagacgggctcctcgcac
tgcaccgctgtctattcaaatggccatcaagtgcctgcttcaaaccgtgaccctgccatc
tcttcagtgactctgactcctcccacctcacctgaggaggctcagacagttcactctcat
tcggcacagaagtggatgcggttgccggtggcgatggatggattcagtgttgacaacacc
agtcatcacggtggcaagattccacgaaggatggccagtcaggtggttgaaactgtctgg
caagagtgcaacatcaaccgagctcagaacaaacggaaattctctgccacggcctccaac
ggaaccagcgaggaggagacactaataaaagtgggcgcctgggacttcgtggactccaca
cagagatcaaactgcaactgttctaggcacaaaacactgaagcagagagcaagcagcaca
cctggccagccacccaccgccggtcagacgcagcagccgcccatcaagcacaaagctggg
gagaagcccgagaagggagacaagcagcagaaacggccgcagacgcctttccaccaccgc
aactcagtctgcgaagatgttacaatggaaactgacgcctctgcgggccagcgcttggct
ctcagaggtcaagagagtggacgatttcctgggctcaggcctactgatgtgggcactggc
tcgaaacctccacagctacacagtggggctggatctaccgtagggagcagtggcccaaca
gagatggtcggctctcctcaaccgccaccgcttagccctcacccctgcgaacgtggcgag
gaaccctcagacaccattaagaacccctccactccacaacatttttatcctccctccaca
gaaccctgccttttgccccagaagggtccagatgacgcccgtttggaacccctcacccaa
cctttcccccctgcataccccgagaccctggagcccaccccgtatatcagcgcagcagta
aatatggatgacgatggaagtcatgccccatggaggttctttaacttgcctcgtaggaaa
gatgcagagtttcctacgccgacactaccgggagacaaactccgagaagaagcgtcactc
ggagctgaagggattatgtctgttactgagtcaatggcagcctccaaaagactgcttaag
gtctcagatgagcggatccagatgtacctgcagcgacagaaccagcacctggctgcagcc
atcacagacggcgaccacgagccagaggtcgacccttatgcctttgtcgacggagatgtc
aagttcacgttctcggataagaaagacaaagctggattagagagagaaccaggaaagaaa
cacaagggagaagatggcaatgctgcatctgatgatgctcagcgggctgcagcccataac
cgggctgcttccaccagcctcatacatgattcagacctggcagtctccatcaaagaccta
gacaacctcttcaactcagatgaggacgaacaaacgcctggagcgcggagagctgtaaat
ggagcagatgagaagtttggcagcaaggagacaaagccagccacattggaccctgtctcc
tgtataagcacagccgatcttcaccagatgttccctacgcctccgtctttagagcagcac
ttcatgggttactcccccatgaacatgggcagtaaagacggctgtatggagcctggctct
ggcctcaacgctctggatggccccactgctctgggtggcccatttaaaattgaggtagag
gagagcttctgcagccccaaaccttctgaaatcaaggacttctcatttgtgtacaagcct
gagttgtgtcagccatttgtggggtgttcaatgtttgccccgctgaagtcattgcccagt
cagtgcctgccccctatcaaactgcctgatgagtgtgtttacaggcccagctggacagtg
ggaaaactggagctacttaattctgtacctgctatgaccattttcagcaaggatggtgaa
aacaatgccatggagcaagattatatccagacgtacacccctcaaacccatacgccattc
ttgtctaacagtgccccacccagcaacagtggcacgagcatcctcccgtctcctgccacg
ccacgtttctccgctcccaccccacgtaccccacggacacctcggacgcccagaggccca
gccagtgtgcaaggttcactcaaatatgagaactcggatctgtactcgccggcttcaacg
ccttcaacctgcaggccgctcaactctgtagagcctgcgacggttccctccatccctgaa
gcccacagcctatacgtcaacctcatcctgtcggagtctgtcatgaacctgtttaaggac
tgcaacttcgacagctgctgcatctgcgtatgcaacatgaacatcaaaggtgccgatgtg
ggcatctacatcaacgatccaaacatggaggcccagtacccctgcggatgcggcttcagt
gctgtagtcaatcggcgttacggtaatggctctggccttttcctggaagacgagctggat
atcatcggacggggttcggatgtgagccaggaggcggagaagcgctttgaggctttacgg
tgcatttcactagagaagacagggggtggaggcaaagatcgagtcccggacgagcttatc
tctctcctgcaggatcagtgcactaatcccttctctccgatcctggcactggatcctgag
ggactgtcttcccaagggccagggggcaccactgtaccaccatgcgtgcgtgtagaggag
agggacttccacaatgactgttacctggctctagaacacgggcggcagttcatggacaac
atgtccggtgggaaagtggacgaggtgttagtgaagagcacgtgtttgcatcattgggcc
aaacgtagcgcggtggacgtgagtgcgctgtgctctcaggacgtgttgagagttcttctc
tctctccagcctgttcttcaggatgctattcagaagaagaggactgttcgctcctgggga
gttcaggggcctctcacatggcagcagtttcacaaaatggctggaagaggttcttacggc
actgacgagtctccggagcctctgcccattcctaccttcctggttgggtacgagtatgac
tttgtggtgctatctccctttggcctgccgtattgggagaagctactactggatcccttt
ggctctcagagagatgtaggatatctggtcctctgcccggacagcgattctctcctcact
ggagccaagagtttctttagagagttgacagcggtctatgagtcttgtaagctgggtcaa
catcgaccaatctccaaagtgcatgctgatggcattgttagggtgggtggagctgctgcc
aagaagctctcagaacagccggtcaatgattggttcctgaaagcagctagtggcagcagt
gatgcatttgccaaactcaaactgtttgcccaagtctgcaggcatgacctcgctccatac
ctcgctacacagccattggacagctctctccttattcagccaacccctgtcccttcttcc
acccaatcgtcatcttcacaatcctcaggctccgcctcctccaactctcaaacctcaatg
gcctctggaggctccgccctcaacaacaacaacaacagtgctgccagcaacagtggctca
ggcctgccaggcagcaccaataacactccctcctcctcctcctcaggcccacagggcagc
agcattcagtctgccaagcccagctcgttccctccctttggaagcatgggagtccaaggt
aacagctcccagtctggggctctgggccagcaggctgtcacccagaactcgagcctctct
ggagacaattcagccatcaacagccagactcaggggccatctgaaccaccagagagcact
atggagagagaaaaggttggagttcctacagacggggattctcatgccatcacataccca
cctgcaatcatgatctatatcgtggaccccttctcatatgaggaggcggagccagggtca
tcacaatcaagcaagtggactctgggactccttcgctgctacctggagatgctccaggcc
cttccaactcatatccgcaactctgtctttgtacagatcgtcccctgtcagtatctgctc
cagcctgtgaggagtgaagaaaggcacctttacgcccagcacctcaagtctctggccttc
tccgtattcacccagtgcagaagacccctcccaacctccaccaatgtgaagtcattgacg
ggtttcggcccaggcctcgcccttgacacctcgctcaggaacccagatagaccagagtgt
ctgcgattgtacacgccaccattcatcctggccccaacgaaagacaagcaaacggagctg
ggtgagactttcggagaggcgtctcagaagtataacgtcctttttgttggctactgcctg
tcgcatgatcaaaggtggctgttggcaacttgcacggacctgtacggagagctgctggaa
acctgtatcatcagcgtagatgtacccaacagagcaagaaggaaaaagggatctgcacgg
aagatgggtctgcagaagctttgggagtggtgtttgggtttggttcaaatgacatcgttg
ccatggagagttgtgattggccggcttggacggatagggcatggagagttgcgagactgg
agtattttactgagcagacggaatctgcagtcggtgtctcggaggctgaaggagaactgt
aagctgtgcgggatctcagcatctgacactcccagcattcttagcgcctgcctggttgcc
atggaaccccagggctcatttgtcatcatgccagactcagtgtcaacaggctctgtgttt
ggtcgcagtacaactctaaacatgcagacgtctcagctgagtacgccgcaggacacgtct
tgcacacacatcctggtgttccccacctctgcctttgtgcaagtcaacagctccaactac
acacatgagaacattgacattgccttcaatcctggcaatgatggatcggatccaatggga
ggcatctttgacctactggagcaggagaatgacctggttgatccagatatcataaacatc
ctccctgcctcacccaccacatcaccagtccactcacccggatcccagtacccgcatgga
ggagacgggagcaagggtcaaagtacagaccgcatggagtctcacgaagaagctcccaat
atcctccagcagccattagctctgggctattttgtgtccacagcaaaagcaggtccactg
cctgactggttctggtccgcgtgtcctcaggcacagaaccagtgtccccttttcttaaag
gcctctctacacctccatgtgtcttcagtgcaatcggatgaacttttgcacagcaaacac
tctcaccctctggactccaatcagacctctgatgttctcagatttgtgttggagcagtac
aatgccctttcctggctgacctgtgaccctgcgacccaggaccgccgctcttgcctgccc
atccattttgtggtgctcaatcaaatgtacaacttcatcatgaccatgttgtaa
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