Danio rerio (zebrafish): 100004296
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Entry
100004296 CDS
T01004
Symbol
tbxtb
Name
(RefSeq) T-box transcription factor T
KO
K10172
brachyury protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
100004296 (tbxtb)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Other transcription factors
T-box
100004296 (tbxtb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T-box
TNRC6-PABC_bdg
Motif
Other DBs
NCBI-GeneID:
100004296
NCBI-ProteinID:
XP_001343633
ZFIN:
ZDB-GENE-081028-48
Ensembl:
ENSDARG00000039806
UniProt:
X1WGE3
LinkDB
All DBs
Position
13:4440963..4454041
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AA seq
424 aa
AA seq
DB search
MDSGDCPEKNIQFRVDHLLTAVENELQAGSEKGDPTERELKVALDENELWQKFKALTNEM
IVTKNGRRMFPVLKVNISGLDPNAMYSFLLDFVPADNHRWKYVNGEWVPGGKPEPQAPSC
VYIHPDSPNFGAHWMKSCVSFSKVKLTNKLNGGGQIMLNSLHKYEPRIHIVRVGGPQRMI
TTHAFPETQFIAVTAYQNEEITSLKIKYNPFAKAFLDTKERSDHKEIIEDVSESQQSGYS
QLSSWFLPSAGSLCPSANPHAQLNSALSLSTSHGCERYSTLRGHRSAPYPSTYAHRTASP
TGYSDSSSCLSMLPSHDNWSSLQMSSHSSVLPMGHSSGPNSNTSQYTSLWSVGNSSQSGS
MSSSLGSQFLRGSAGHYSSLAHPLTAPSSGSPLYDTAASEASEYDTAAHTRLPTAWTHVA
PPSL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggactccggtgactgtcctgagaagaacattcagtttagggtggaccatttattaact
gcggtagaaaatgagcttcaagctggcagcgagaaaggagatccgacggaaagagagctt
aaagtcgctttggatgaaaatgagctttggcagaaattcaaagcactgacaaatgagatg
atagtgaccaagaatggcaggcgcatgtttccagtactaaaagttaatatatcgggtcta
gatccaaacgccatgtactctttcttactggatttcgtcccagccgacaatcaccggtgg
aagtatgtgaacggtgagtgggtaccgggcggcaaacccgagccacaagcccctagctgc
gtgtacatccacccggactcgccaaacttcggcgcgcactggatgaagagctgcgtgtcc
ttcagtaaagtcaaactcaccaacaaactcaacggaggagggcagattatgttgaactcg
ctgcacaaatatgagccgcgtatccacatagtgcgcgttggtggtccacagaggatgatc
accactcacgctttccccgaaacacagttcattgcagtgactgcctatcaaaatgaagag
attacgtctctcaaaattaaatacaatccattcgccaaagcttttctggataccaaggaa
agaagtgatcataaggaaattattgaggatgtcagtgaaagtcagcagtctggttattct
caattaagcagctggtttctgccatccgcagggtcactgtgtccatccgcaaaccctcac
gcacagctcaacagtgcactgtctctgtctacatcccacggctgtgaacgttactccact
cttaggggccaccggtccgcaccgtaccccagcacgtacgcccaccgcactgcttctcct
actggttattctgacagctcctcgtgtttatccatgttgccgtctcatgataactggtcc
agtctacagatgtcctcgcactccagtgtgctgccgatgggccacagctctggcccaaac
tcaaacaccagtcagtacaccagcttgtggtctgtagggaactcctctcagtctggaagt
atgagcagcagtctgggctctcagttcctccgcggctcggccggtcactacagcagtctc
gctcacccgctcacagcgccctcttctggctctcctttatacgacacagctgcttcagag
gcttcagaatatgacacagcagcccatactcgccttcctacagcctggacccatgtggca
ccaccatccttatag
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