Danio rerio (zebrafish): 100004458 Help Entry 100004458         CDS       T01004                                  Symbol dchs2 Name (RefSeq) protocadherin-23 isoform X2   KO K16507   protocadherin-16/23 Organism dre  Danio rerio (zebrafish) Brite KEGG Orthology (KO) [BR:dre00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:dre04515]     100004458 (dchs2) Cell adhesion molecules [BR:dre04515]  Cadherins   Cadherin related    100004458 (dchs2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Cadherin_4 CADH_Y-type_LIR Motile_Sperm ECSCR Motif Other DBs NCBI-GeneID:  100004458 NCBI-ProteinID:  XP_021332170 ZFIN:  ZDB-GENE-150311-2 UniProt:  A0A8M9QEM9 LinkDB All DBs Position 1:complement(27198612..27247686) Genome browser AA seq 3264 aa AA seqDB search MNMEFYTRTFFQCLLLALLCEHVCAQVFNLSLSVEEGLPAKTIVGDIRAGLPAKTQSSGF FISESRDSEVFRDFEIDGDTGIISTAVVLDRERTDKYEFAAATLTGEVIKVSIQVTDVND NFPIFPVKIIHLNVSELSPPGTRFELEGAQDKDEGDYGTQGYRITDGEMRELFKVEIRSN GVGMFNLDLVLQTRLDREIADFYNFTIEAFDGGVPPKTGQLQAQITVLDENDNQPVFNQS EYHAVILENATLMTPVCQIFATDADLGSNGQVIYGINRRQSDPNEFFIIGSSSGIISVNK HLDYENESYYELIVTAWDSGIQPESSNTFVSIKVLNVNDNPPNISVLFLNEAGAPEVSEG AGFENYVARIAVSDPDLGDVKKIDVLLQGGDGMFSLRSMDDFLYVLCVDGPLDREMKDLY ELTVTASDYGCPPLSSVITFQIQVTDVNDNPPVFHQTIYEESIDEDVRVGTAVFRVKATD KDLGGDSEIIYSIVQSEQKCPFNIDPTLGVITTAAALDHERERELRFLVVASDGGSPSLS STATVIIHVEDVNDNKPIFQQQFYNATVKEHTAVGTCILQVTAIDADGAEFGSVQYFLYD GFSGKDVHPFFHINSVTGNICVSQDIDYEAGLLTFDLLIKAEDQDGFSSQTFVHIDIEDV NDNAPVFNPGKYVTSVSVHAQPGTELLNVYASDQDAGNYGKITYELQPGDSATLFTMDQS TGSVYLSSSLMQLRSSSVKLSVSARDGGGMSAAYPANITVNILQSDQPPALFQKAQYTFS ISEDAPVGSSVGLVQAITPANSVEVVSYVISSGDPQGLFSIDSQTGIINTAQPLDHESIS YVILNIQFHTGTLPIHSSAQVNVSITDINDNPPVFQKTSEHITISRTTPPGTPLFIAHAH DTDSGFNGRIHYMLHPKSHLFTIHPNLGTLMLNGDVSRDSSSRYELSIIAEDEGHPSLSS TLGLVIEMDSSASVDDTLAFETLVYQVEIGESAPKDTRMIQVRAHGNRSQHTGTSGKETS VITYSLKPLSGVPPFRIHPETGWMFVSQSLDYETEPSYRFCVCAKAQNSKMEATATVVVM VQDENDNAPVFSRDVYFFSVQEGPSPHGLIGTVKASDRDSLNNGVLSFILLTDGKYFSVN SRTGEIINLVALDREEQAQHVLRVMVTDQGRPRLNTTTTIHITVTDVNDNRPQFTHMPST KELNVQVWAVIPVNSVVISMFAKDLDAGENGTVKFSMTDNQLGHFSIDSLSGDVKVTSQF SSNPQMRYTLRVVATDNGLFPLEETAVVHIQVYVLDQQKENFQSSFQHFTVLEDVGLGTI IGSLGVSNAPDTELQYSIVEGNGSLQFGIKSSSGELYVAQHLDYEVTQRYFLVVRAEAFP TFNVTVFAAVSILDVNDHNPWFPSNGNIVIFGVHEDVSNGTVVYVFNARDGDGSLHYSEL YYSLTFDPSPAIEGLPLHIDPHTGVVTTNGQLDRERTENIIFRVTASDSLKEPNERKNAS IIAQMIVLDINDNSPTFVSMDIACVPEDTEVGLLVHHVMAKDKDEGRNGHVTYSVSSGNE KSYFHMESTGHLFLNSSLDYESQHVHILIVQARDNGVPSLSSTQTLTVKVLDVNDHPPVF QQHIYNTTVIENRDPGEIIVQVTTVDLDSEVNSAVSYSLLPGPGYELFRINSHTGHISTS VRLDREIQSTFTLRVQAEDSGTPSLSSTTTVLCSVLDENDNAPQFSQPDLHIVIPENLAP GVIHIVQASDIDNGLNGTIQYSIEDLECFSIDAVTGMIRTTRPLDREERSNYSLLITAAD HGHPPLSSSALLHITLTDENDNSPLFARKSYRASISEGLPVGTEILHLIAWDPDEGANGV VTFSLEEENSGNFHVDGSTGVIKLTKPLDRETRSQHVFRAVATDGCSEGPRSSIATVTIQ VEDINDNTPACVKEPMRVSVSSVNTRPNRPIAKVTAQDPDLGDNGTVVFRLPEEDELFQV DGSGAVRLKAPLSNEVSGTKLLRIRAEDLGRPSLTSSCLLLIQLNDEEPLLQFTEELYEV AVPENSKTGSWVANVVAHDQTSDEGMIKYNIFSGNENEAFIINPVTGDITVNDQRLLDFE VQSKVQLVVLAENGHQTAYARVAITLQDINDNAPVFKQSYYRTAVWEGQIHNTYVMQVLA TDSDSGVNGQISYFIMDGNHNNAFVIDSVRGILATNAVLDREIVSSYKLIIQAKDMGKAP LTGTCTVRVQVVDVNDNSPTIPSMEAVTIAENLPLGYIVTRVIANDVDLSPSATYRLIEK DDTSRSFAIDLYTGIITTTKILDYEEQSVYTLKVQASDSVHQTEAELSIQVLDVNDNSPV FSQESYQVVLSERTLADTFVVSVLATDKDSGKNGRVSYRLLSSPVGGFYIDPDNGSVFTN KPLNYVANGNVLRLLVEARDSGDPNLFCVTSVDIEVVDFNDNAPFFTQNSYQINIPEDVS VGSTLITLLAEDKDYSDENTHLEYLIISGNDERRFCLEVVSIQAEPHSRTVGQLVLCDTL DRETTDAYSLTVTVTDRGINPLNSSTVVSVKVLDINDNAPAFSSPEYHAQVSENSPVGLV LVQVSAYDPDLGANGTITYNIISGNSEGLITVDSSTGVIKVNGTLDYEEDTKLTLTVQAS DWGTSDDKKVSFAVVYILVLDENDNSPFFMFPTYNCSVSENLPAFTPVCTVHAVDEDAGT FGLLSYSIVTPCFVDYDSSNPDKKEAFGIDPLTGDIHTKQTFDYEGDRNFCFVVEARDKG DQVATLRVRIEIEGIDEFSPIFTQNVYHFSLPANPKVGQSIGYLMAMDHDGGLDGLVEYS LVSPSSFFNVNKTNGCLFVSNSVYQRQSPISNETTEDLIVLASSPKLDSRSSTCHVIVNI SSTTKALASADFSVHTATLSVLLMIFLILLLSFIALVLRCRSKKNATKKTPSLSANLNSE TDSFETTAGNLHNTVNGINLQDLQEPVNSWGRIDIPNPSSNSNSNASSGRGSTEEETAED EEIKMINKFPYFKRLSSLTTQQTSRVSDSGIPRDSDQFSFHSADEDPPFDPNIGIVRIVD MPSSESLHNFKDEGGGEGMLPQVVNMKEVEEVMRRCMSMRDDQGPVEGSLTNLISSEERL HGSHSWDYVINWQPRFQTLASVFTDIGMLPDEGMRARDVEPESQSLLHPPPLITAVAQPG IRAVPPRMPYRRSPLVRLPTYTKTFTRNTELRSSAMTPNFSPSLSILTVRTPSSSPVVSE TGLGSYTKIATLPRDMLDEAEIQI NT seq 9795 nt NT seq  +upstreamnt  +downstreamnt atgaacatggagttttacacacggactttcttccagtgtctcttactcgcattattatgt gagcacgtttgcgcgcaggtgttcaatctcagtctctccgtagaggaaggtttacctgcg aaaactattgtcggggatataagagctgggctaccggcgaaaacccagagttctggattt tttatatctgagagcagagattcggaggtgtttagagactttgagatcgacggagacacc gggatcatctctaccgcagtagtgttggatcgagagcgcacagataagtacgagttcgcg gccgcaacattaacaggagaggttattaaagtatctattcaggtgacggatgtaaatgat aatttcccaatattccctgtaaaaataatccatttgaacgtgtctgaattaagccctccg ggaacccggtttgagttggaaggagcacaggacaaggatgagggggattatggcacccag ggctacagaataacagatggagaaatgagagaactttttaaagtggagatccgcagtaat ggagttggcatgttcaatttagatcttgttctgcaaacaagattagatagagaaatagca gacttctataatttcactattgaggcttttgatggtggtgttccaccaaaaacaggccag ttgcaagcacaaattactgtacttgatgaaaatgacaaccagcctgttttcaaccaatct gagtatcatgctgtcatattggaaaatgccacattaatgacacctgtctgccagatattt gcgacagacgcagatcttggaagcaatggccaggtcatctatgggatcaatcgccgtcaa agtgaccccaatgagtttttcattattggcagttcttcaggtatcattagtgtcaataaa catttggactatgaaaacgagtcatattatgaactcattgtgacagcatgggattctggg attcaaccggaatcctccaacacatttgtaagtattaaagtcctgaatgtcaatgacaac cctccaaatattagtgttctgtttcttaatgaggctggagcacctgaagtatctgaagga gcaggatttgaaaactatgttgccaggattgccgtctcagatccagatttaggagatgtc aagaagatcgatgtgctcctccaaggtggagatgggatgttttccctcagatctatggat gattttctttatgttctctgtgttgatggcccactggacagagagatgaaggacttgtat gaacttaccgtgactgcctcagattatggatgccctcctttgagcagtgtgataacattt cagattcaggtcacagatgtgaatgacaatccacctgtttttcatcaaaccatctatgag gaaagcattgacgaggatgtgcgagttggaacagctgtatttcgagtcaaagcaacggac aaagatctaggaggggactctgaaatcatttactctattgtgcagtcagagcaaaagtgt ccgtttaacatagatccaacattaggtgtcattactacagctgctgcccttgaccatgag agagagagggagctgaggtttctggtggtggcgagtgatggtggttccccttccctgtct tctacagccactgtgatcatccatgtggaggatgtcaatgacaacaaacccattttccaa caacagttctataatgcaactgtcaaagaacacacagctgttggaacatgcatcttacag gtaactgccatagatgccgatggtgctgaatttggatcagtgcaatacttcctttatgac ggcttcagtggcaaggatgttcaccctttctttcacataaactctgtgactgggaacatt tgtgtgtctcaagatattgattatgaagctggccttttgacctttgacctgttgattaaa gctgaagatcaagacgggttcagctcgcaaacgtttgttcatattgacatagaagatgtg aatgataatgctcctgtttttaatcctgggaaatatgtcacaagtgtgagcgtccatgcc caacctggcaccgagctccttaatgtttatgcgtctgaccaagatgctggaaactatggg aaaatcacttacgaacttcagcctggagattctgcgactttattcactatggaccagtca acaggttcggtctacctgagctcttctctaatgcagctgcgcagtagcagtgtgaagctg tctgtttctgctcgagatggaggaggcatgtctgctgcttatcctgctaacatcactgtg aacatcttgcagagcgaccagcctcctgccctcttccagaaagctcaatacaccttctcc atctctgaggacgcaccagtgggctcttctgtgggtttggttcaggccattacccctgcc aattcagtggaggtagtttcatatgtgatatcctcaggtgatccgcaggggcttttttca attgattcccagactggcatcattaacaccgcccagcccctggaccatgagtctatctct tatgttattttaaacatacagttccacacagggaccctccctatccacagcagtgctcag gtcaatgtctccattactgacatcaatgacaaccctcctgtgttccaaaagacctcagaa cacatcaccatatcccgtaccacccctccaggaacaccactcttcattgcacatgctcat gacacggacagcggatttaatggcagaattcactacatgttacatcctaaaagccacttg tttaccattcacccaaatcttgggactctcatgctgaatggtgatgtctccagagattcc agctcgaggtacgagctcagcatcatagctgaggatgagggtcatccttcattaagctct acattagggcttgtgatagagatggattcttcagcttctgtggacgacactctagcattt gaaactctggtttaccaagtggaaattggagaaagtgctccaaaagacaccagaatgatt caggtacgtgctcacggaaacagatcgcaacacacaggaacctctggaaaagaaacctct gttatcacttactctcttaaacctctctctggagtcccaccatttagaatccacccagag acaggatggatgtttgtatctcagagccttgactatgaaacagaacctagctacagattt tgtgtgtgtgcaaaagcacagaatagcaaaatggaggccacagcaactgtggtggtcatg gttcaggatgagaatgacaatgcaccagttttcagtagagatgtgtacttcttcagcgtg caggagggaccgtctcctcatggactgattggaacagtaaaagcttcagacagagattca cttaacaatggagtgttgtccttcatcttgctgacagatggaaaatacttttctgtcaac tccagaacaggagagatcataaaccttgtggctttggatcgtgaggagcaggcgcagcat gttttgagggtgatggtcacagatcaaggtcgacctcgtctcaacaccactactactatt cacattactgtgacagatgtcaacgataaccggccacaattcacacacatgccttccact aaagagctaaacgtacaggtgtgggctgtcattcctgtgaattctgttgtaattagcatg tttgctaaagaccttgatgctggagagaatgggactgtgaagttctccatgacagataat cagttgggccattttagtattgatagccttagtggtgatgtcaaagtgacatcacagttc tcctcaaacccgcagatgcgctacaccctgagagtggttgccacagacaatggccttttt ccactagaggagactgcggttgttcacatacaggtttatgtcttggatcaacaaaaagag aatttccagagcagctttcagcactttactgttctagaagatgtgggactgggaactatc attgggtctctcggtgtttcaaatgcaccagatacagaactacaatattccattgttgag ggtaatggtagtttgcagtttggcattaaaagttctagtggcgagctttatgtggcacaa catctggactacgaagtcactcagcgttacttcctggttgtacgtgcagaagcctttccc acttttaatgtcactgtatttgctgcagtcagcattctcgatgtcaatgaccacaacccc tggttccctagcaatggcaacattgtgatatttggtgttcatgaggatgtttccaatgga acagtggtatatgtgtttaatgcacgagatggtgatggaagtctacactacagtgagctt tattattctttgactttcgaccccagccctgccattgaggggctgcctttacacattgac cctcacactggagttgtgacaacaaacggacaactggaccgtgaacgaactgagaacatt atatttagagtgacagccagcgatagcttgaaagagcccaatgaaaggaaaaatgcatca atcatagctcaaatgattgtgctggatatcaatgacaacagtcctacatttgtctccatg gatatagcatgtgtcccagaggacacagaagttggacttttggttcatcatgtgatggcc aaagataaagatgaaggaagaaacgggcatgtcacttacagtgtgtcttcagggaacgag aagagctactttcacatggaaagcacagggcatctgttcctgaattcttccctggattat gaatcccagcatgttcacattctcattgtccaggctagagataatggtgtgccgtctctg tcctccactcagacactcacagtgaaggttctggatgttaatgaccatcctcctgtgttc cagcagcacatttacaacaccacagtcattgagaacagagatccaggagagatcattgtt caagtcacgacagtcgaccttgattcagaggtgaattctgctgtgagctacagcttgtta cctggtcctggatatgagcttttcagaataaactcccacactggacacatcagcacctcc gttcggctagacagggagatccaatccacatttactcttagagtccaggcagaggacagt gggactccgtctctatccagcactacaacagttttgtgctctgtcctggatgaaaatgac aatgctccacaattctcccagcctgatttacatatagttattccagaaaatttagctcct ggagtaattcacattgtccaggcctctgatattgataatgggctaaatggaactattcag tactccatagaagatttagagtgtttcagcattgatgcagtgactgggatgatccgcact acgagacccctggacagagaggagcgttccaactactcccttctcatcactgcagcagac catggccatccgcctctgagctcatctgcactgctgcacatcaccctcacagatgaaaac gataacagccccttattcgcccgcaaaagctatcgagccagcattagcgaggggctccct gtgggtacagagatcctacatctgattgcgtgggatcctgacgagggggccaatggtgtg gttacattctccctggaggaggagaattctggaaactttcatgttgatggctctactgga gtgataaaactcacaaagccattggaccgtgaaactcgttcccagcatgttttcagggct gtagctactgacggttgcagcgaaggtccacgcagctccatcgctacagtaacaattcaa gtggaagatattaatgataatacaccagcatgtgttaaggaacccatgcgagtgtcagtg tcttcagtgaacacacgtcccaatcgacctattgcaaaggtaacggcccaagatccagac ctaggggataatgggactgtggtgtttagacttccagaagaagatgagctgtttcaggtc gatggatctggagctgtgaggctaaaagcacccctgagtaatgaagtatctgggacaaag ctgctccgcattcgggctgaggatctaggtagaccttccctcacctccagctgccttctg ctcattcagcttaatgatgaagagccactgttgcagtttactgaagaactttatgaagtc gcagttccagaaaacagcaagacaggatcttgggtggccaatgttgtagctcatgaccag acatcagatgaaggaatgatcaagtacaatattttcagtggcaatgaaaatgaagccttc attattaacccagttacaggtgatatcacagtaaatgatcagagactactagactttgag gttcagagtaaagttcaattagtagtcctggctgaaaacggacatcaaacagcctacgcc agggtggccatcactctacaagacatcaatgacaatgcaccagtgttcaagcaaagctac tacagaacagctgtgtgggagggacaaatacataacacctatgtcatgcaggtgttagca acagattctgacagtggtgtaaatgggcagatcagttacttcattatggacgggaaccac aataatgcatttgtgatcgactctgttcgtgggattcttgccacaaatgctgtcttggac cgagaaattgtctcatcctacaagttaattatccaggccaaggacatgggcaaagcacct cttacaggcacttgtactgtccgtgtccaggttgtagatgtaaatgacaatagtcccaca attccatccatggaagcagtgactattgcagaaaatcttcctcttggttatattgtcacc cgagtgattgcaaacgatgtggaccttagtccttcagcaacatacagattaatagagaag gatgatactagcagaagctttgcaattgacctgtacacaggaattattaccacgactaaa atcctggactatgaagaacaatctgtctatacgttgaaagtgcaggcatcagactctgtt catcaaactgaagctgaactctccatccaggtgttggatgtcaatgataactctccagtc ttctctcaggagtcttaccaggttgtgttgtcggagcgtacattggcagacacatttgtt gtgtctgtattagcaactgataaagactctggcaaaaatggaagagtttcttataggcta ctgtcttccccagtgggagggttctacattgatcctgacaatggttctgtgtttaccaac aagcctctgaattacgttgcaaatggaaatgtattacggcttctggtggaagcacgtgac agtggtgaccctaaccttttttgtgtcacttctgtggatatagaagtggtggacttcaat gataatgccccattcttcacacagaactcataccagataaacattcctgaggatgtgtct gttggaagtactctaattaccctgttagcagaggacaaggactactcagatgaaaacacc catttggagtatctaatcatcagtggaaatgatgagaggcggttctgccttgaagttgtt agcattcaagctgaaccccacagtcgaactgttggtcaactagttctctgtgatactctg gatcgagagactacagacgcatactcattaactgtgactgtaacagacaggggaatcaat cccctaaatagctcaactgtggtttcagtcaaagtccttgatattaatgacaatgcacct gctttcagtagtccagagtaccatgcacaggtcagcgagaacagccctgtaggtctggtt cttgtccaagtgtctgcctacgatcctgatctaggtgcaaatggcaccataacgtacaat ataatctctggtaacagcgaaggcctaatcacagtggactcttcaactggtgtcattaaa gttaatgggacactggactatgaggaggacaccaaattaacattaacagtccaagcatca gattggggaacttcagatgacaaaaaagtatcttttgctgttgtttacattttggttctg gatgagaatgacaattccccgttcttcatgttccccacctacaactgctcagtgtctgaa aaccttccagcttttacccctgtatgcacagtacatgctgttgatgaagacgctggaacc ttcggactgcttagttattccattgtaactccctgttttgtggactatgacagtagcaac ccagacaagaaggaagcctttggtattgatcctctaactggagacatccatacaaaacag acatttgactatgaaggagatcgaaatttctgttttgttgtagaggcccgtgacaaagga gatcaagtggcaaccttgagagtacgaattgaaatcgaaggcattgatgagttcagtccc atcttcacccagaatgtgtaccatttttctttgccagctaatcccaaagttggccaaagt ataggctacctgatggctatggatcatgatggtggtctggatggtttagtggagtactct ttagtcagcccttcctcatttttcaatgttaacaaaacaaatggctgtctatttgtttca aactctgtgtaccagagacaaagccccatctcaaatgagacaacagaagacctgattgtt ctagcaagcagccccaaattggactccaggtcatcaacctgtcatgttattgttaacata tccagtacaacaaaggctttggcaagtgcggatttcagtgttcacactgccactctcagt gtattgttgatgatattcctcatacttctactaagcttcattgcccttgttttaagatgc aggtccaaaaagaatgccacaaagaagacaccctccttatctgctaatcttaacagtgag actgactcttttgaaacaactgctggcaaccttcacaacaccgttaatggtattaacctc caagatttacaagagccagtaaactcctggggaagaattgatattccaaacccatcgagt aactcaaattcgaatgcctcaagtggaagaggatctaccgaggaagagacagcagaggat gaagaaatcaagatgatcaacaagttcccatatttcaaaaggcttagctctctcacaaca caacaaacatcaagagtctcagactcaggaattcccagagactctgatcaattctccttc cactctgcagatgaagatccaccttttgatcccaatataggtatagtgagaatagtggat atgcccagttctgagagtctccataatttcaaggatgaaggaggaggtgagggcatgctt ccacaggtggttaacatgaaggaagttgaggaggtcatgagaaggtgcatgtctatgcgt gatgaccagggtccagttgagggttcactcaccaatctgatatcctctgaggaaaggcta catggaagccacagttgggactatgtcatcaactggcagccgcgcttccaaactttagcc tctgtttttacagacatcgggatgcttccagatgaaggaatgagggccagagatgtggag ccagagtctcagagccttctacacccaccgccgctcatcacagctgttgcccagccagga atacgtgccgttccacccagaatgccttatagaagatcgcccctggttagactgcccaca tacactaagaccttcactagaaacacagagttgagaagttctgcaatgactcctaatttc tccccctctctgtcaatacttacggttcggacacccagttcctctccagtggtctcagaa acaggtttaggatcctacacaaaaatagcaacactgcctagagacatgttagatgaagca gaaattcaaatttaa

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