Danio rerio (zebrafish): 100004847
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Entry
100004847 CDS
T01004
Symbol
rorC
Name
(RefSeq) nuclear receptor ROR-alpha A-like isoform X2
KO
K08532
RAR-related orphan receptor alpha
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
100004847 (rorC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
dre03310
]
100004847 (rorC)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100004847 (rorC)
Nuclear receptors [BR:
dre03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
100004847 (rorC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100004847
NCBI-ProteinID:
XP_001344049
ZFIN:
ZDB-GENE-110411-42
Ensembl:
ENSDARG00000087195
UniProt:
A0A8M1PV85
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Position
16:17978914..18166863
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AA seq
480 aa
AA seq
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MMRAQIEVIPCKICGDKSSGVHYGVITCEGCKGFFRRSQSSSVQYSCSRQSNCPIDRASR
NRCQSCRLKKCVAQGMSRDAVKFGRMSKRQRDSLFAEVERHRQHQRLQANSVQEPQPLQA
YRSSKDTREQPSHLIPPLPAAYPFSVEPELAGCPAEVIPYLDCHIVEAQTQGLAYRVPLR
RGENNSLSAGRGFESTRSTPESILNMTGSEMGFHPFDPESSFFSYPTSLQTEELAASIIR
SHKETTQYRLEELQALRWKVFSREEVHIYQSKPVDEMWQYCAVRLSDAVQYVVEFAKRIP
GFRQLCQNDQIALLKSGSMEVVLVRMTRMFNTANNTVFFDGKYAGTELFKSLACSDLIAA
VFEFANNLCALRLNEQQMAVFTAMILINPDRPCLEDRERVQRVRTEVELALRHILHRDNQ
ESLLQKLYQRVPVLRSMCALHIEKLQWFRQLYPLTVHSLFPPLYKELFGSDADIHSLTTH
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgagctcagattgaggtgatcccatgtaagatctgtggagacaagtcatcaggg
gttcattatggagtcatcacttgtgaaggctgcaaaggtttctttcgcagaagtcagtcc
tctagcgtgcagtactcatgctccagacaaagcaattgccccattgaccgtgccagccgt
aatcgttgccagagctgccgtctaaaaaaatgtgtcgctcaaggaatgagccgagatgcg
gtgaagtttgggcgaatgtccaagcgtcagagagattcactatttgcagaagttgagaga
catcgccagcatcagcgtcttcaagccaactcagtccaggagccccaacctctccaagcc
taccgatccagcaaagataccagagaacagccatcacatctcatcccacctctaccggca
gcctaccctttttctgtagagccagaacttgcaggctgcccagcagaagtaattccatac
ctggactgtcacatagttgaggcccagactcagggtttggcctatagagtccccctcagg
agaggtgagaacaacagcttgtcagctgggagaggatttgagtccacaagatctacacct
gagtctattctgaacatgactgggagtgaaatggggtttcatccttttgatcctgagagc
tcattcttttcctatccaacctctctacaaacagaggagcttgctgcaagtattatacgc
tcacataaagagaccactcagtatcgactggaagaactgcaggctctcagatggaaggtt
ttcagcagggaggaggtccacatataccagagcaaaccagtggatgagatgtggcagtac
tgtgctgtacgtttgtcagatgccgttcagtatgtggtggaatttgctaaacgtatccca
gggttccgccagctttgtcagaatgatcaaattgctctcctcaagagtgggtccatggaa
gtggttctggtccggatgactcggatgtttaacacagcaaacaacacagtattctttgat
ggcaaatatgcagggacagaactcttcaaatctcttgcatgtagcgatctaatagctgca
gtttttgaattcgctaacaatctgtgtgcactgagactgaatgaacagcagatggcggtg
tttacagcaatgatcctaatcaatccagatcgaccatgtctggaggacagggaaagagtt
cagagagtaaggacagaagttgagcttgcccttagacacatactgcacagagataatcaa
gagagtctactgcagaagctgtatcagagagtgccggtgttgaggtctatgtgtgcactg
catattgagaaactgcaatggttccggcagctttaccctctcactgttcattcccttttc
cctccactatacaaagagctttttggctctgacgcagatatacattcactgaccacacac
taa
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