Danio rerio (zebrafish): 100004929
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Entry
100004929 CDS
T01004
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
100004929 (zeb1a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
100004929 (zeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-met
Herpes_glycoH_C
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
100004929
NCBI-ProteinID:
XP_001344107
ZFIN:
ZDB-GENE-070912-124
Ensembl:
ENSDARG00000016788
UniProt:
F1QMZ5
LinkDB
All DBs
Position
2:complement(43805926..43852036)
Genome browser
AA seq
1190 aa
AA seq
DB search
MADGPRCQRRKQRQPRRNNVRSLCSVPEATSDSDDEDKLQIVEEDGVAEDLDQKPTVLQL
KAAQQNSDTCTQDDGSLGPETLIREIRVKEECVSDEEDGAQDEATSEEKQTKTEPVYPDA
AEEHQRTPERGVHDENGTPDAFSHLHNCPHCSRGYKRHTSLKEHIKLRHEKNDDNYCCSL
CSYTFTYRTQLVRHMTAHRQLREKRTVTQSGSRKFKCTECSKAFKYKHHLKEHLRIHSGE
KPYECPNCRKRFSHSGSYSSHISSKKCSSIIGVTRTPGVKTTITIPRPTHILLREKVVNI
TNKPPQKQLTLKQIKQEPVEHQPKPASATPAMAATTTNGVVAPQSVLQTLVLPTVGLVQP
ISINLSDLQNALNVAMDSNVMRQMVTSTNANGTSAKIVGQVPAQTQAVVLQPQQTQSQTQ
PQVISAISLPVVGQDGNPKIIINYNPQLDRQLKAVKVNTTQPAVGQTNVTQTNSTTSNVP
QPKVLQVHSLQSSSSENQASGTAKPTQVNIIKPVQMGNLSKTPSIIKITPAQAARLAQAR
AAQPKLTHQTLLLVRRADGSQSLVVRQMPVTNSNTQATELKSTPEKTTDTATEETKETDN
TENCEEQNLTAPIGIQIKTEPESPSKIEPEIQSEGEGEMQADENEEEETETASKTDKVSC
SGTVHAGVSCGDNFHNYAYCLLCDSCPGKRKMLESKESNAKASPTTISLNSLLDKDKSGA
AERLLPLLKAYSQNPEPTEEQLAQVAKTVKLPLAAVTKWYEKMRSKRILLQATGNSKNKK
TPPSPESQEPTSTQDTRTPSPTPPPDSSPSEEEQNRSTASPASPPASVSTDDLVIVKTEE
VEEELQCEPLDLSLPKSSSTLPGTITKLPVSSQKEPLNLSSLNKQTLAGNTIYVAQGSTG
PLNIMSASLPTLVAIAEPGGVPCISSAISGNKRTILIPQLTYTYNSTEAPNNALTEKKSM
VILNNSPKMADVTSDCTSEEQNDEEMQIIKRRKTFTGMYACDLCDKIFQKSSSLLRHKYE
HTGKRPHECSICNKAFKHKHHLIEHTRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSY
CKRETQELPEHISTSTTPPSQPDSDERESDEEEEEEEEEDDLSAVDMSDIRVVQIGDEYD
DEEESGVEEETEDGGMIMELELGENVETEETREDTVFTSNEENMEMETED
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgccagcgcagaaaacagagacagccacgacgcaacaatgtg
aggagtctttgcagtgtgccggaggcgacctcagattcagatgatgaagacaaactgcag
attgtagaggaggacggtgttgctgaggatcttgaccaaaagccaacagtattacagctg
aaagcagcacagcagaactctgacacgtgcacacaagacgatggcagcctggggccagaa
actttaatacgagaaataagggtcaaagaggagtgcgtcagtgatgaggaagatggtgct
caagatgaagcaaccagtgaggaaaagcagaccaaaaccgagcctgtttacccagatgca
gcagaggagcatcagagaacgccggagcgaggagtccacgatgagaacggcacccctgat
gcgttttcacacctgcacaactgtccgcactgctctcgcggctacaagcggcacacgtct
ctgaaggagcacatcaaactacgccatgagaagaacgacgacaactactgctgctccctc
tgcagctacaccttcacctaccgcacgcagctcgtccgtcacatgacagcacacagacag
ctccgagagaagcggactgttacgcagtcgggaagcaggaagtttaagtgcacagaatgc
tccaaggccttcaaatacaagcatcacctgaaggagcacctgcgcatccacagcggtgag
aagccatatgagtgccccaattgtcgaaaacgattctctcactcgggatcctacagttct
cacatcagcagtaagaagtgttcaagcataatcggcgtcactcgtacacctggagtgaaa
acgactataactattccccgcccaactcacatccttctgagagagaaggtggtgaacatt
accaacaagcctccgcaaaagcagctcaccctcaaacagatcaaacaggagccagtcgaa
caccaacccaaacctgcctcagccactcctgccatggctgccaccacaaccaatggagtc
gtggctccgcagagcgtcctccaaacattagtcctgcctacagtcgggctggtccagcca
atcagcatcaaccttagtgacttacagaacgcgctgaatgtggcaatggatagcaatgtc
atgaggcaaatggtcactagcaccaatgctaacggaacaagtgctaaaatcgtaggacaa
gttccagcgcagactcaagctgttgtgttgcaaccacagcagacgcagtcacagacgcag
ccgcaggtgatctccgctatctctttgccagttgtgggacaagacggaaaccccaaaata
atcatcaactacaatccacagttagaccgacaactcaaggctgtaaaagtaaacacaacg
cagcccgctgtggggcaaactaacgtgacgcagacgaattccacaacgtctaatgtccca
cagccgaaagtgttgcaggttcattcgcttcagtccagctcgtctgaaaaccaagcatca
ggaactgctaaacccacacaggtaaacatcatcaaaccagtccaaatgggaaacctcagc
aaaacgccgtctataatcaagataacccctgcccaggccgccaggttggcgcaagctcgg
gcggcacaaccaaagctcacccatcaaacgttactgctggtgaggagggcagacgggtca
cagagcctcgtggtccgccagatgccagtcaccaattccaacacgcaggccacagagtta
aagtcaaccccggaaaagactacagacacagcaactgaggagacgaaggagactgacaat
actgaaaattgtgaagagcaaaacttgactgcccccataggaatccaaatcaaaaccgaa
ccagaatccccatccaaaattgaaccagaaatacagagtgaaggagagggggagatgcag
gcagatgaaaatgaagaggaagaaacagaaacggcatcaaaaacggataaagtctcgtgc
tctggaacagttcacgccggcgtctcgtgtggagataactttcataactatgcgtactgt
ctgctttgcgacagctgtccgggtaaacgtaaaatgctagagagtaaagagagtaatgcc
aaagcgtcgcctaccaccatctcactcaactctctcctggataaggataagagtggcgca
gcagaacgactccttcctcttctgaaggcctacagtcagaacccggagcccacagaggag
cagctggctcaggtcgccaagacagtcaaactccccctggcggcggtcaccaagtggtac
gagaagatgcgctccaaaaggatactgctgcaggctactggcaactcgaaaaacaagaaa
acaccaccatctcctgagtctcaagaaccaacctcaactcaagacacccgcactcccagt
cccactcctccccctgactccagcccctcagaggaggagcagaacagaagcactgcctcc
cccgcgtctccaccagccagtgtctccactgatgatctggtcattgtgaagacagaagaa
gtggaagaggagctgcagtgtgaaccgctggacctctcgcttcccaaatccagctccact
ctacccggaaccatcactaagctacctgtatcgtcccaaaaggagccactcaacctgagc
agcctcaataagcaaactctggcaggcaacaccatctatgtggcacagggcagtacgggg
ccattaaacattatgtccgcctcattgccaacgctggtggccatagcagagccaggcggc
gttccatgcatcagctctgcaatatccggaaacaagcgcacaatactcataccgcagctc
acctacacctacaacagtaccgaggcacccaacaatgccttgactgagaaaaagtccatg
gtgatactcaacaacagtccgaagatggccgacgtcacttctgactgcacatcagaagag
cagaacgatgaagaaatgcaaatcataaagaggaggaagactttcactggcatgtacgcc
tgcgatctgtgtgacaaaatcttccagaagagcagttcgctgctgcgacacaagtatgaa
cacacaggcaagcgtccgcacgagtgctccatctgtaataaagccttcaaacacaagcac
cacctgatcgagcacacgcgccttcactccggagagaaaccctaccagtgtgacaaatgc
gggaagcgcttctcccactcgggctcttactcccaacacatgaaccacagatactcctac
tgcaagagggaaacacaggagctgcccgaacacataagcacctccaccactcctccatca
cagcctgactcagacgagagagagagcgatgaagaagaagaggaggaggaagaggaagac
gacttatcagccgtggacatgagcgacatcagagtggtgcagataggagacgaatacgat
gatgaggaggagagcggagtggaagaagagactgaggatggaggaatgataatggagctg
gagctcggggaaaatgtggagacggaggaaacgagggaggacacggttttcactagtaat
gaggaaaacatggagatggaaactgaggattga
DBGET
integrated database retrieval system
