Danio rerio (zebrafish): 100004956
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Entry
100004956 CDS
T01004
Symbol
cdx1b
Name
(RefSeq) homeobox protein CDX-1b
KO
K09312
homeobox protein CDX1/4
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
100004956 (cdx1b)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
100004956 (cdx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100004956
NCBI-ProteinID:
NP_001092232
ZFIN:
ZDB-GENE-070615-29
Ensembl:
ENSDARG00000116139
UniProt:
A5PLE8
LinkDB
All DBs
Position
21:complement(43979466..43991954)
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AA seq
255 aa
AA seq
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MYVSYLLDKDSSMYPNSVRHPSLNLNPQNFVPAPPQYPDFTGYHHVPGITTNDPHHSQTG
SWNPAYPPPREEWTPYGPGSGVSSSSTGQLGFSPPEFSSVQTPGLLQSSINSSVGQLSPN
AQRRNPYDWMRRSVPPASSGGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELA
TALSLSERQVKIWFQNRRAKERKINKKKMQQPQPASTTTPTPPGSALPGNVPMVTSSSSG
GLVSPPMPMSIKEEY
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagttatctcctagataaggactccagcatgtacccgaattccgtaagacac
ccaagcctaaatttaaaccctcagaatttcgtaccggcgcctccacagtatccggacttt
acaggataccatcacgtcccgggaattaccactaatgacccgcatcacagccagacgggc
agctggaaccccgcttacccccctccgcgggaggaatggacaccttacgggccgggatca
ggagtgtccagctcgagcacaggtcagctgggcttcagtcctccagagttttcatctgtc
caaactccgggtctgctccaatcctccatcaactcttcagtcggacagctgtcacccaac
gcgcagagacgcaacccttacgactggatgcgccgcagcgtcccgcccgccagctcagga
gggaagaccagaacaaaagacaaataccgggtggtgtacacagatcatcagcgtctggag
ctggagaaagagtttcattacagccgctacatcacaataagaagaaaagcagaactggca
accgcactcagtctgtcagagagacaggtgaagatctggttccagaaccgccgtgctaaa
gagaggaaaatcaataagaagaaaatgcagcagcctcagccggcatccaccaccacaccc
accccaccgggctcagcactaccaggcaatgtgccgatggtgaccagcagcagtagcggt
ggcctcgtgtccccgcccatgccaatgtccatcaaagaagagtattga
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