KEGG   Danio rerio (zebrafish): 100004956
Entry
100004956         CDS       T01004                                 
Symbol
cdx1b
Name
(RefSeq) homeobox protein CDX-1b
  KO
K09312  homeobox protein CDX1/4
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dre03000]
    100004956 (cdx1b)
Transcription factors [BR:dre03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain ANTP: HOXL
    100004956 (cdx1b)
SSDB
Motif
Pfam: Caudal_act Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 100004956
NCBI-ProteinID: NP_001092232
ZFIN: ZDB-GENE-070615-29
Ensembl: ENSDARG00000116139
UniProt: A5PLE8
LinkDB
Position
21:complement(43979466..43991954)
AA seq 255 aa
MYVSYLLDKDSSMYPNSVRHPSLNLNPQNFVPAPPQYPDFTGYHHVPGITTNDPHHSQTG
SWNPAYPPPREEWTPYGPGSGVSSSSTGQLGFSPPEFSSVQTPGLLQSSINSSVGQLSPN
AQRRNPYDWMRRSVPPASSGGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELA
TALSLSERQVKIWFQNRRAKERKINKKKMQQPQPASTTTPTPPGSALPGNVPMVTSSSSG
GLVSPPMPMSIKEEY
NT seq 768 nt   +upstreamnt  +downstreamnt
atgtacgtgagttatctcctagataaggactccagcatgtacccgaattccgtaagacac
ccaagcctaaatttaaaccctcagaatttcgtaccggcgcctccacagtatccggacttt
acaggataccatcacgtcccgggaattaccactaatgacccgcatcacagccagacgggc
agctggaaccccgcttacccccctccgcgggaggaatggacaccttacgggccgggatca
ggagtgtccagctcgagcacaggtcagctgggcttcagtcctccagagttttcatctgtc
caaactccgggtctgctccaatcctccatcaactcttcagtcggacagctgtcacccaac
gcgcagagacgcaacccttacgactggatgcgccgcagcgtcccgcccgccagctcagga
gggaagaccagaacaaaagacaaataccgggtggtgtacacagatcatcagcgtctggag
ctggagaaagagtttcattacagccgctacatcacaataagaagaaaagcagaactggca
accgcactcagtctgtcagagagacaggtgaagatctggttccagaaccgccgtgctaaa
gagaggaaaatcaataagaagaaaatgcagcagcctcagccggcatccaccaccacaccc
accccaccgggctcagcactaccaggcaatgtgccgatggtgaccagcagcagtagcggt
ggcctcgtgtccccgcccatgccaatgtccatcaaagaagagtattga

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