Danio rerio (zebrafish): 100005300
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Entry
100005300 CDS
T01004
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dre03016
]
100005300 (lcmt2)
Enzymes [BR:
dre01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
100005300 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
100005300 (lcmt2)
Transfer RNA biogenesis [BR:
dre03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100005300 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
LCM
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_3
Kelch_6
Kelch_2
Kelch_1
Motif
Other DBs
NCBI-GeneID:
100005300
NCBI-ProteinID:
NP_001122029
ZFIN:
ZDB-GENE-110714-2
Ensembl:
ENSDARG00000000747
UniProt:
A8WHX0
LinkDB
All DBs
Position
9:29393129..29407323
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AA seq
673 aa
AA seq
DB search
MPVNRKREQGKDAAVQGTNDSSVVSKVSAAAQGYFHDDFLKHFVCKMSRRAPLINRGYYV
RWKAVDHCVKQFLHATKSCSRRQILSLGAGFDSLFFRLRAEGALGGVTVFEVDFPEVARR
KAALINSNACLKDLLPDWETVLNKQTNAVFISSGHYNLIGADVRKEQEVEASLSAAGLQW
DNPTLILSEVVLTYMETQWSDAVIGWAARLLPQSMFVMYEQIHPDDPFGRVMQSHFLKLN
SKIHSLQQYPDNVAQTQRFIQEGWEKCHCLDMNQFYFDLLPEDERQRIENLEPFDEFEEW
HQKCSHYFILTASKGSVTRQALLTLPNTSSIPQMTPQWNTHPPLVVQPMCGSPSVEALGM
ASALLTPEIILLTGGFGRNGRDTAARVLIKEKCGWKSACVEVHGDKVVSLYQTLTSVPGG
GVVLFGGRSSPLSPSGSVVLVTADLADEVQLSFTNIVCTGTGPKPRWRHTSTLICYNDKT
FLFVFGGRSEKDPILGDAHFLCLEDKHWTEITVVGAGPEARHSHSACPYGGGLVIFGGLG
EGGKPLGDALYLRPTSSGFCWEMKDLHPPPVPRYSHSAHVINEKLVVVGGVWLQADGVPG
VSIVNLNTGSCVEIQLDTLSVPWPLMLHSFCSELLDCEGSELVLIGGGGNCFSFGTHLNL
HPVTVDLKPILCF
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgccagtaaacagaaaaagagaacaaggaaaagatgctgccgtacaagggacaaatgac
agcagtgtggtcagtaaggtgtcagcagcggcacagggctacttccatgatgatttcctc
aagcattttgtgtgcaagatgtcaagaagagctccactcattaatagaggttattatgtg
cgctggaaggcagtcgatcactgtgtgaagcagtttctccatgcaacaaaatcctgctcc
aggagacagattctgtcactgggagcggggtttgactcgctgtttttccggctgcgtgca
gaaggagcccttggaggtgtcactgtttttgaagttgactttccagaagttgcccgtcgc
aaagctgccttgatcaatagcaatgcttgcctgaaggacttgttgccagattgggagact
gtcctaaataagcagacaaatgctgtgtttatcagcagtggtcattataatctgattggt
gcggatgtcaggaaggagcaggaggtggaggcaagtctgagcgcagctggactgcagtgg
gacaatcctacactcatcctgtcagaggtggtgctgacttacatggagacgcaatggtcg
gatgctgtgattggctgggctgccaggctcctcccacagtctatgttcgtgatgtatgaa
cagatccacccagatgacccatttggcagagtcatgcagagccacttccttaagctcaac
tctaaaattcattctctacaacaatatccagacaatgtggctcaaacccagagattcata
caggaaggctgggaaaaatgtcactgtctggacatgaaccagttttattttgatcttctt
cctgaagatgagaggcagagaatcgaaaatctggagccgtttgatgagtttgaggaatgg
catcagaaatgttctcattacttcatccttactgcctccaaaggctctgtgaccaggcaa
gctcttctcacgctaccaaatacatcctccattccccaaatgactcctcaatggaacaca
catcctcctctggtcgttcagcccatgtgtggatcaccgtctgtggaggctcttggtatg
gcatctgcccttctgacccctgaaatcatccttctcactggaggctttggaagaaatgga
agagacactgcagcaagggtcctgatcaaagagaagtgtggctggaaaagtgcctgtgta
gaagtacatggagataaagtggtgagtctttatcagacgttgacttctgtccctggtggt
ggagtcgttcttttcggaggccgatcttctccacttagtccatcaggcagtgtcgttttg
gtgaccgctgaccttgctgatgaagtacaactttcattcacgaacatagtttgtactggc
actggtccaaagccacgatggcgacacacatctactttaatatgctacaacgacaagacc
tttctgtttgtgtttggaggacgttctgaaaaggatccgattctaggagatgcacatttc
ctgtgtttggaagacaagcactggactgagattacagttgttggtgctggtccggaagcc
cgccactcccattcagcttgtccctatggaggggggcttgtgatatttggaggtttgggg
gaaggaggcaaacctctgggggatgccctttatctaagacccacatcatcaggtttctgc
tgggagatgaaagatttacatccacctccagtgcccagatactctcactcagctcatgta
attaatgagaagctggttgtggttggtggagtctggcttcaggctgatggagtaccagga
gtttctatagtaaatctcaacactggaagctgtgtggagatccagctggatactttgtct
gtgccttggcctctgatgctgcattcgttctgctctgagttgctggattgtgaaggatcc
gagctggtgctgattggtggaggtggaaactgtttctcatttggaactcacctcaacctt
catcctgttactgtggatcttaaaccaatactttgcttttga
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