Danio rerio (zebrafish): 100005358
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Entry
100005358 CDS
T01004
Symbol
si:ch211-274f20.2
Name
(RefSeq) calnexin
KO
K08054
calnexin
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04141
Protein processing in endoplasmic reticulum
dre04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100005358 (si:ch211-274f20.2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100005358 (si:ch211-274f20.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dre03110
]
100005358 (si:ch211-274f20.2)
04131 Membrane trafficking [BR:
dre04131
]
100005358 (si:ch211-274f20.2)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
dre04091
]
100005358 (si:ch211-274f20.2)
Chaperones and folding catalysts [BR:
dre03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
100005358 (si:ch211-274f20.2)
Membrane trafficking [BR:
dre04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
100005358 (si:ch211-274f20.2)
Autophagy
ER-phagy
Other ER-phagy associated proteins
100005358 (si:ch211-274f20.2)
Lectins [BR:
dre04091
]
L-type lectins
100005358 (si:ch211-274f20.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Menin
Motif
Other DBs
NCBI-GeneID:
100005358
NCBI-ProteinID:
XP_001344439
ZFIN:
ZDB-GENE-091204-91
Ensembl:
ENSDARG00000058579
UniProt:
A0A8M1PSV3
LinkDB
All DBs
Position
14:9009597..9028957
Genome browser
AA seq
452 aa
AA seq
DB search
MTVLSTDTDMMPLFFGLCLCYISGAQNVYRAVSIPDQAYFAETFDEGALDRKWVLSKAVV
KHLRYNGEWAVEESIQPRLLGNKGLVLKSPGRHHAISAYLRNIYHFKDKPLILQYEVSFQ
KGIDCGGAYIKLLSQSDDLRLSQFSDATPYTIMFGPDKCSSNHKIHFIFSHHNPITRTYE
EKHARQPEMDLSDYFTDQQAHLYTLNLYPDNTFEILVDLTLINKGSLLEDMDTPVASSDQ
KQEHLTNEASDLNLEQHMRSDGVDRQRNDCTEASVCEGSSRPASSGSNNPKNQPSTNTND
KDNKGKQQFTMSPIAAVGFELWSLTGDVMFDNILLCDDLEVARRWTEDTWGQRQTPGMIE
KLLMATVKRPWLWGVYVFTVGLPIILFVSLMWPDKRFGPPDQDYYYKKTDEPQTDGPQDV
EEHVTHDHGENQRVETKSRVVKRAPKNTEVTS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgacagttttgagcacagatacagatatgatgcctttattctttggcttgtgcttgtgt
tacatcagtggagcgcagaacgtttacagagcagtttcaataccagaccaggcttatttt
gccgagacgtttgatgaaggtgcgctggacagaaaatgggttttgtccaaagcagtggtg
aagcatctccgttataatggggagtgggctgtagaagagtccattcaaccaaggctgttg
ggaaacaaaggcctggtcctcaagtctcctggcagacatcatgccatatctgcatacttg
cggaatatctatcactttaaagacaaacctcttatcttacagtatgaagtttccttccaa
aaggggattgactgtggtggagcctacatcaagttgctttcacagtcagatgacctgcgt
ttgagccagttcagtgatgccactccatacacaattatgtttggtccagacaaatgcagc
agcaatcacaaaatacatttcatctttagtcatcataatcccatcacaaggacatatgaa
gaaaaacatgctcgccaaccagaaatggaccttagtgactattttactgaccagcaggcg
catctctacactttgaacttatatcctgacaacacatttgagatcctcgttgacctgacg
ctgattaataagggcagtcttttggaagatatggacacaccagtggcgtcttctgaccaa
aaacaagaacatttaacaaatgaagcctctgatctaaacttggagcaacatatgaggtca
gatggtgtggacagacaaagaaacgattgcactgaagcttcagtttgtgagggctcttct
cgtccagcaagttcaggctctaacaatccgaagaaccaacccagcacaaacactaatgat
aaggacaacaaaggaaagcagcagttcacaatgagtcccattgcggctgtgggttttgag
ctttggtcccttactggagatgtgatgtttgataatatcttgctttgtgatgatctggaa
gtagccagacggtggacagaagacacatggggccagagacagacacccggaatgattgaa
aagctgttgatggcgaccgtcaagcggccttggctctggggggtctatgtcttcaccgtg
ggccttcccatcatcctcttcgttagcttaatgtggcctgataagcggtttggaccacca
gatcaagactattactataaaaaaacagacgagccccagacagatggacctcaggatgtg
gaggagcacgtcactcatgatcacggtgaaaatcaaagagtcgaaactaaaagcagagtg
gtgaagagggctccaaaaaacacagaagtaacaagttaa
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