Danio rerio (zebrafish): 100005540
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Entry
100005540 CDS
T01004
Symbol
bbx
Name
(RefSeq) HMG box transcription factor BBX isoform X2
KO
K21643
HMG box transcription factor BBX
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
100005540 (bbx)
Transcription factors [BR:
dre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100005540 (bbx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100005540
NCBI-ProteinID:
XP_005172753
Ensembl:
ENSDARG00000012699
UniProt:
A0A8M9PSV2
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Position
10:complement(28468738..28524875)
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AA seq
898 aa
AA seq
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MKGGGGGKEPPGEGEVSGKRPKRKCLQWHPLLAKKAPDFSEEEEEEDEEELEKEPVLCAE
SSVQEGECGGMEDDSEEYSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILAD
WWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCPATNKPVKSPSHSVSNSRKKVWSLPS
NPSKDPSVAKKQPKTDSTPQLNFAMADPNKMGGLSMLLLAGEHALTAREISSSSSQTGCT
DVAKHTGKSALFQLAEISSSPAQSAGGSKNAEDTSSLTHVEASGPSQPSSPDLPKSCVKS
PLFQLAEQISSSRSPSASEGRQCGQSALFQLAEMCLASEAEKMEARSSQPSGGSSSLCAQ
NSTEIPDREEQKETSELPLTTSSSTSTSGSTSSTPTETSPCKTPKKKKKKKENKESDENP
ASPKKMKKRQSPESDLDSVTFTIEAVVKGAWGSEETPKKKPRPPESESSLTAEQSPSVKK
KTKPKPKKQLKLKDDAMQEEEEDADKVANKPQDVEMITEEAPMTPKTECEDEFDVKVEPP
CGMEDAMLQFSPMEPTEVDEKEDSDAKPLESRQEDKDPEVKQEVCGSRKSERSCKGALYK
TLVSEGMLTSLRANVDRGKRGSMRGSVSDHEGSWNDENWGFSQAATSNPKKLKKSKSKDE
TTPGLGKLEEEFEKKFNSLPQYSPLTFDKKSVAVTKKKKNSTSSPPEPPKTCKGSSSSQK
KTLFHKIVNKYKHRKEKSSGTDKEVAMFEPVATESSPAVKSSSPCVSPSPEPQKILDIPV
GSQKRKARKNKITHLVRTADGRVSPAEEDKSKDQTKNQDEKPFTQETLCNRGVCYTDPRS
AEADLTDAPGSLPAFFSLAALAEVAAMENVHRAQRAVSIPTEAQVKDMAPVLISCADQ
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtggaggtggagggaaagagcctccgggggagggcgaggtcagcgggaagagg
cccaaacgcaagtgtctgcagtggcacccgctgcttgccaagaaagctccagacttctct
gaggaagaggaggaggaagacgaagaggagctggagaaggagccggtgttatgtgcggag
agcagtgttcaggagggagagtgtggcgggatggaggatgacagtgaagaatactcctct
gaacagcgggctcggcggcccatgaacgcctttctgctattctgcaaacgccatcgctcg
ctggtccgtcaggagcatccacgattagacaaccgaggagccactaaaatcctggccgac
tggtgggccgtattggaccccaaagaaaagcagaaatacacagacatggccaaggagtac
aaggatgcgttcatgaaggctaaccccggatacaaatggtgtcccgccaccaacaagcca
gtaaagagtccttctcattccgttagcaattcccgcaagaaggtctggtctcttccctcc
aacccaagcaaggacccttcagttgccaaaaaacagcccaaaactgacagcacacctcag
ctcaacttcgccatggctgatcccaataagatgggtggcctaagcatgctgctgttagct
ggggaacacgcactgaccgccagagagatttcctccagctcttcccagactggatgcaca
gatgttgctaagcacactgggaaatcagcccttttccagctggctgagatttcttccagt
ccagcacagtcagctggaggaagtaagaatgcagaggacacaagctcacttacacatgta
gaggcttctggaccgtctcagccaagctcaccagacctgcccaagagttgtgttaaatca
cccctgtttcagctggctgagcagatctcttccagtaggtctccgtcagcatctgaaggg
agacagtgtggccagtcggcccttttccagctcgctgagatgtgtttggcctctgaggct
gaaaagatggaagctcgatcatctcagccgtctggcggttcttcctctttatgtgctcag
aatagcacagaaatcccagaccgtgaagagcagaaagaaacttctgagcttcctctcacc
acatcttcatcaacctctacctccggctccacttcgtctacccctactgaaaccagccca
tgtaaaacacccaagaagaagaaaaagaagaaagaaaacaaggagtcagatgaaaatccg
gcttcgcctaaaaagatgaagaaacggcagtcgcccgagtcggacctggacagcgtgacg
ttcaccatcgaagcggtagtgaaaggagcttggggttcagaagagacgcccaagaagaaa
ccccgtcccccagagagcgaaagcagcctgactgcggaacaatctccgtctgtgaagaag
aaaacaaaacccaaaccaaaaaaacaactgaagttaaaagacgacgccatgcaagaagag
gaagaagatgcagacaaagttgcaaataagcctcaggatgttgagatgataaccgaggaa
gctcccatgacccctaaaacagagtgtgaggatgaatttgatgtaaaagtggagccccct
tgtggcatggaggacgcaatgttgcaattctctcccatggagccaacagaagtggacgag
aaagaagactctgacgccaaaccacttgaaagcagacaggaagataaagacccagaggtg
aagcaggaggtctgtgggtccaggaagtctgagagaagctgtaaaggagcgctttataag
actctggtgtctgaagggatgctcacatcgctgagagcaaatgtagacagaggaaaaaga
ggttcaatgcgagggagtgtgtcagatcatgagggcagctggaatgacgagaactgggga
ttttctcaagctgctaccagcaacccgaagaaactcaagaagtccaagtctaaagatgaa
accaccccaggactaggaaagcttgaggaggagttcgagaaaaagttcaacagcttacca
cagtacagccccctgacatttgacaaaaagagcgtggcggtcaccaagaagaaaaaaaac
agtacgtccagccctcccgaaccgcccaaaacctgcaagggttcatcctcatctcagaaa
aagaccttattccacaagatagtgaacaagtacaaacacaggaaggagaaatccagtggc
acagacaaagaagtcgccatgtttgagcctgtggctacagaaagcagtccagcggtgaag
tcgagcagtccgtgtgtgtctccttctcccgaaccgcagaagattttggacatacctgtg
ggaagtcagaaaagaaaggctcggaagaataaaatcacacatttggtgcgcacggctgat
ggtcgtgtttcacctgcagaggaagacaaatctaaggatcagaccaagaatcaagatgaa
aagccattcactcaagagacattatgcaatagaggggtttgctacactgacccgagatca
gcagaagcagacttgacagatgcgccgggcagcctcccggccttcttcagcttagctgct
cttgctgaggttgcagccatggagaacgtgcacagagcccagcgtgctgtgagcatcccg
actgaagctcaagtgaaggacatggctcctgtgctgatttcttgtgcggaccagtga
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