Danio rerio (zebrafish): 100005813
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Entry
100005813 CDS
T01004
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1
KO
K26273
protein strawberry notch
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
100005813 (sbno1)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100005813 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
BUD22
Motif
Other DBs
NCBI-GeneID:
100005813
NCBI-ProteinID:
NP_001186845
ZFIN:
ZDB-GENE-080522-2
Ensembl:
ENSDARG00000099080
UniProt:
D6RUV3
A0A8M1NXK4
LinkDB
All DBs
Position
10:50668622..50701306
Genome browser
AA seq
1386 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDLFDVDVQDSVPLVSSQQPVSLNALDIGLSNEASGVVRID
PPVPPTPTVTIREKPQPSTTTFVLNQLNQLPSLGTIVVSKPSTGSSTRQTITVTKVLHSS
SPAQRSSASPSVCTAAPANTEQIRLKDLLRSSSLKSSSLGELMKLKPPADIAPPVATATG
TTEVNNGLKKEVSSKDVARIWINDDMKMRSFSPVNKLPGMKEEEEPEEEEEEELGHAETY
AEYMPMKLRIGLRHPDPVVETSSLSSVNPPDVWYRLSIPEETIDRGWLSALQLEAVTYAA
QQHETFLPNGDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRKRSLWFSVSNDLKYDAERD
LRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRFKQLL
HWCGDDFDGVIVFDECHKAKNVCPIGSSKPTKTGLAVLELQNKLPKARVVYASATGASEP
RNMAYMNRLGIWGEGTPFREFANFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGVT
FKIEEVPLTLDYIKMYNKAVRLWVSAREKFQQAAQLMDAEQRMKKSMWGQFWSAHQRFFK
YLCIASKVRRVVQLAREDVKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVLQ
SLVEKHFPAPDRQKLFSLLGIDLSAKKTPSPAENKTEQKGKKRKGPESKKHVKKARKSGG
LSGSSSDDSSSEDSDRDAESDDSFKSISSGDEDDFNPFKDDSSEDEEDDPWLIRKDSKKS
KDKRNKKKKKSIDPDSIQSALLASGLGTTRPTFTAPIKPANPTLAVAKSDPEESSCVTSQ
DAVEDAQRMKRDLLEKLELLAEDLPPNTLDQLIDELGGPDNVAEMTGRKGRVVSNDDGSI
SYESRSELDVPVEILNLTEKQRFMDGDKNIAIISEAASSGISLQADRRVKNQRRRVHMTL
ELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHGDRR
ATETRDLSRFNFDNKYGRNALEIVMKSIVSLDSPLVSPPADFDGDFFKEIRNGLIGVGLI
NVEDRSGVLSLDKDYNNIGKFLNRILGMEVQQQNALFQYFSDTLSAVIQNAKKSGRYDMG
ILDLGSGDEKVKKVDVKKFLTPGYSTSGHVELYTVSVERGMSWEEATHVWADQNGPDDGF
YVQVRNNKKIAILVKEVNPRKRLFMVYRPNIGKQVKLETYTDIKKRSKKVLSDDAKQHWM
DQYSCSADVCSHAYWRGNCKKASVGLQCEIGLRCRTYFVLCGSVLSVWTKVEGVLASVSG
ANVKMQIVRLRTEDGQRIVGLIIPQNCVSPLVNILSSSDQSQQLAVQQQHLWQQLHPQSL
THTPLT
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggtcaagatttgcttctggctgctctcagtgagagtgggatctgccccaat
gacctgtttgatgtggatgttcaggacagtgttcctctggtgtcctcacagcagccggtc
tcattaaatgcactcgacatcggtctcagtaatgaagcttcaggagtcgtcaggattgat
cctccagttcctccaacacctacagtcacaatcagggagaagcctcagccctccaccacc
acctttgtgctgaatcagctgaatcagttgccttcgctgggaaccatcgtggtctccaaa
ccctcgacgggcagcagcaccagacagaccatcaccgtcaccaaggtgctgcacagctcc
tctccagcacagcgcagctccgcttctcccagcgtctgcactgcggctccggcaaacact
gagcagatccggctgaaggacctgctgaggagcagcagcctgaagagcagcagtctgggg
gagctaatgaagctgaagcccccggcagacatcgcaccacctgtcgccaccgccactggc
actacggaagtaaacaacggcttgaagaaagaagtgtccagcaaagatgtagcaagaatc
tggatcaacgatgacatgaaaatgcgcagcttctcacctgtaaataaactaccaggaatg
aaggaggaagaggagccagaggaggaggaagaggaggagctcggccatgcagagacgtat
gccgaatacatgccaatgaagctgcgtatcggtctgcggcaccctgaccccgtggtggag
accagttctctgtccagcgtgaaccctccggatgtttggtacagactctccatcccagag
gagaccatcgaccggggctggctgtctgcgctgcagctggaggccgtcacctacgctgca
cagcaacacgagacgttcctgccgaatggggaccgagcggcgtatctgataggagacggt
gctggagtgggaaagggcagaaccattgctggaatcatatatgagaattaccttctgggc
aggaaaagatctctctggtttagtgtctccaatgatttgaaatatgatgcagaaagagac
ttgagggacatcggcgcgaaaaacattcaggttcattcactaaacaagtttaaatacgga
aagatttcctccaaacacaacggcagtgtgaagaaaggcgtgatctttgccacatactca
tctctgattggagagagtcagtctggaggaaaatacaagaccaggtttaagcagctcctg
cactggtgtggagacgactttgacggcgtcattgtgtttgacgagtgtcacaaagccaaa
aacgtttgtccgatcggatcctccaaacccaccaagacgggattggcagtgttagagctg
caaaacaagctgccgaaggcacgagtcgtgtacgctagcgccacaggagcgtctgaaccc
cgcaatatggcctacatgaatcgcctgggcatctggggggagggaactccattcagggaa
tttgcaaacttcatccaagctgtggagagacgaggtgtgggcgccatggagattgttgcc
atggatatgaagctgagagggatgtacattgctcggcagctgagcttcacaggcgtgacg
tttaagatcgaggaagttcctctgacgctggactacatcaagatgtacaacaaagcagtg
cgactgtgggtgagcgcgagagagaagttccagcaggcggctcagctgatggatgcggag
cagcggatgaagaagtccatgtggggtcagttctggtcggcacaccagcgcttcttcaag
tacctgtgcatcgcctctaaagtgcgacgtgtggtgcagctcgcccgagaggacgtcaag
aacggcaagtgtgtggtgattggcctgcagtccactggagaagctcgaaccctggaggct
ctggaggagggaggaggagaactcaatgactttgtgtccactgcaaagggtgtgctgcag
tctctagtggagaagcattttccagctccagacagacagaaactcttcagtctcttaggc
atcgacctgagcgccaaaaaaacaccttcacctgcggaaaacaagaccgagcagaagggc
aagaagaggaaaggtcctgaaagtaagaagcatgtgaagaaagctcgtaaatcaggcggt
ctgtcgggcagcagctcagacgacagcagctcagaggactcggacagagacgcagaaagt
gacgacagctttaaatccatcagttctggggacgaagacgactttaaccccttcaaagac
gactccagcgaggatgaggaggacgatccgtggctcatcaggaaagactccaaaaagagc
aaagacaagaggaacaagaagaagaaaaagagcattgatccagactccattcaaagtgcc
ttactggcctccgggctcgggacaaccagacctacatttacagctcccatcaaacccgca
aaccccacgcttgctgtcgctaagagtgacccggaggagagcagctgtgtgacgagtcag
gacgcggtggaggacgctcagcggatgaagagagatctgctggagaagctggagctgctg
gctgaggatctgcctcctaacacactggaccagctcatcgacgagctcgggggaccagac
aacgtggccgagatgactggtcgtaaaggccgggtggtcagcaatgatgacggcagcatc
tcctatgagtctcgctcagagctggacgttcctgtggagatcctgaacctgacggagaag
cagaggttcatggatggagataagaacatcgctatcatctctgaagccgccagctctggg
atctctctgcaggccgaccgcagggtgaagaaccagcggcggagggtccacatgaccctg
gagctgccctggagcgcagacagagccattcagcagttcggtcgtacacacagatctaac
caggtcacagcaccagagtatgtgttcctgatctcagagctggctggagagcagagattc
gcctctatagtggccaaacgcctggagagtctgggcgctttaacacatggagacagaaga
gccaccgagaccagagacctcagccgctttaacttcgacaataaatatggcagaaacgct
ctggagatcgtcatgaagtccatcgtgagtctggactctcctctggtgtctcctcctgct
gactttgatggagatttctttaaagaaatccgcaatggcttgatcggcgtggggctgata
aacgtggaggaccggtctggagttctctcgctggacaaagattacaacaacatcgggaag
ttcctgaacaggattctgggaatggaggtgcagcagcagaacgctctgtttcagtatttc
tccgacacgctgagcgccgtcatccagaacgccaagaagagcggcagatacgacatgggc
attttagatttgggctctggagatgagaaggtgaagaaggtggacgtgaagaagtttctg
actcctggatattccacatcaggacacgtggagctctacactgtcagtgtggagaggggg
atgtcatgggaggaagccacacatgtctgggctgatcagaacgggcctgatgacggcttc
tacgtgcaggtgcgcaataataagaagatcgccatcctggtgaaggaggtaaacccgcgg
aagaggctcttcatggtctacagacccaacatcgggaaacaggtcaagctggagacctac
accgacatcaagaagaggagcaagaaggttctgtctgatgatgccaaacagcactggatg
gatcagtacagctgctctgctgacgtctgctcacacgcttactggcgagggaactgtaag
aaggcgtcagtgggtctgcagtgtgagatcggcctgcgctgcagaacgtatttcgtgctc
tgcggctccgtgctcagcgtctggaccaaagtggagggagttctggcgtccgtcagcgga
gccaacgtcaagatgcagatcgtgcgcttgaggacggaggacggtcagaggattgtgggt
ctgatcatcccgcagaactgtgtgtctccgctggtcaacatcctgtcatcatcagatcag
agtcagcagctggcggtgcagcagcaacatttatggcagcagctgcacccgcagagcctc
acacacacacctctcacgtaa
DBGET
integrated database retrieval system
