Danio rerio (zebrafish): 100006233
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Entry
100006233 CDS
T01004
Symbol
arhgap23a
Name
(RefSeq) rho GTPase-activating protein 23 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
100006233 (arhgap23a)
Membrane trafficking [BR:
dre04131
]
Endosome - Golgi transport
Others
Others
100006233 (arhgap23a)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
100006233 (arhgap23a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PDZ_6
PDZ
PH_9
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
100006233
NCBI-ProteinID:
XP_003198196
ZFIN:
ZDB-GENE-121019-1
Ensembl:
ENSDARG00000052950
UniProt:
A0A8M1RNB3
LinkDB
All DBs
Position
3:complement(39313094..39455021)
Genome browser
AA seq
1845 aa
AA seq
DB search
MWSAGQVPLAMPVVCPHVGGKEWCFQDAVGVDCSSPEPRCIWVAVLHGDTQQINISNLQN
DSSPNINGISAGKALSRPAQTSRAKGRRDGLSSSSENPRPVVRSGTDGLGVSWQGPRTLV
LQKNSQGFGFTLRHFIVYPPESALHTTLKDEENGNGKGLQRSRLEPMDTIFVKNVREKGP
AHLAGLCTGDRLVKVNGESVLGKTYSQVIALIQNSESVLELSIMPKDEDVLQLAYSHDAY
LRGNNPYTGKAQNLPPPPPVLYPPRTKSQSPAGFSPCPPPASSHMGQNQLDNWSRWPGSS
AGPSPPLDNRTVASSNVVWAAEGRNCEPGGVGHSSPAHRTEEIQYGMTDRGQQPTGQMRG
RSYSSSSSSGGMMSPLHHGHLANHNMGTAMGHTGGRKGSPPWASPSQPTSTPSSSRNERT
QQALSNWYYSQVPGRERERERERERSSSRSMHPRHRSFSQDRLGELGKARRSQQAGFPHS
ASQDTLLLLQQSAAAYADPYWNHGDWRGEHMYGQHPSVVAYGRKSSENLLASRYGHSGRS
LENLDRAVGILSPRVERSAWVQQPPNRTEVYARHAGHFGQHIESPHQMHHTPQHHQNLTH
ATHQHSSQIPQPQQAAPMARRLPSCQSLDEEPIGYRSYSPSFNRKTGRILQQAQSFRDPS
YTGPHLWTPTSKTSPPEGHPPSATASPAPPTTSSSTTISTPSEGQDRTYRPTNHDRGAGE
ATSEAQTQEVVLRQKPPTGRRGANALRHPHYAIALDSSDPLLFTTDPTEPTAKAESAISH
RRTDVNLPPLSIEDDSLASIPFIDEPTSPSADLRARHVPASSVVSSGGINSAPAVITSPA
SPTFTFPLNRLFSHNCSDPKSNRRSSYLLAITTERSKSCDEGLNAYREEGRVFSRLPKRV
KSFFTEGSLDSLGAAEEARSKRHSTSELGNISYSDVKREGWLHFKQIHTEKGKKVGSAIW
PWRRVFSVLRTHSLFLYKDKREAVLKGAQLGGGAEDEQPISIRGCLVDIAYSETKRKHAL
RLTTQDFCEYLLQAEDREDMLEWIRVIRDNSKTDNEELGFSRQALINKKLNDYRKQSPTG
NKPDSSPRVHRMTFLLSKPDNSAPPRSPKHEAKDESSPPKSPWGINIMKKSKKAGPKAFG
VRLEDCQPAVNNKFIPQIVEICCGLVEDMGLEYTGIYRVPGNNAVVSSLQEQLNKGVDIN
ITEEKWQDLNVVSSLLKSFFRKLPEPLFTDDKYNDFIDANRMENASDRLRTMKKLIRDLP
DHYFHTLKFLVGHLKTVADHSEKNKMEPRNLALVFGPTLVRTSEDNMTDMVTHMPDRYKI
VETLIQHYTWFFCEEQDKDEKTPVDTEDVQPAPNIDHLLSNIGRTGMLGEASDSTNSDSA
KSKGSWGSKRDFTAKDILTLSIMSAVTRKRRKRHNGRLLGSSTDDDSEHEPIKSCISEKD
DLQEMGQVASFCAPRAEGEEDDDEEEEDDEEEEEGAERQKAQEQKETVVPSISSTEEVTS
TVLLSEEEEQKSEVKGGRSWRLDDARSIVSGYSTLSTLGRSLASEGRGEDADDEHSELVS
ETDNESGFASRSLTQERPEKPNRSNQNSHASPEPTAPQSFLYAHCKSPTPSGSATAPSPP
SQHITTNPEDSAARSSTPSTSSYSSSASQRLHNRSFNSHRLIQCDTLARRRTKADKAKAP
SVDLSELSSSSAAEEDRQSGANQIPDSSPSPSSKAKGFSIRNECTPISMVGPGSKGCVLS
PGQGSLADQVRARLMGSADDLCSVGLRKQLSPETRRKRRAWRRHTVVVSPTDCSDKKPTV
QSTKPLASPSPVEKQDVRESHPECSETEAPTARRAVPTSRFRDFL
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcagcaggtcaagtgccactggcgatgcccgttgtgtgcccgcatgtagggggt
aaggagtggtgctttcaggatgcagtcggggtggattgcagctctccagagcctcgctgt
atctgggtggcggttttacacggggatacacagcaaattaacatttccaacctccaaaat
gactcttctccaaacataaatggcatcagtgctgggaaagcactgtcaagacccgcacag
acctccagggcaaaagggcggagagatgggctctcttcatccagtgagaaccctcggccg
gtggtccggagcgggacagatgggctgggcgtgtcctggcagggtccacgcacgctggtg
ctccaaaagaactctcagggcttcggctttactctgcgtcacttcatcgtttacccgcca
gagtccgctctgcacaccactctcaaggatgaagagaacgggaatggaaaggggcttcaa
cgaagtcgtctggagcccatggacacaatttttgtgaagaatgtgagggaaaaaggcccc
gctcacctggctggcctgtgtacaggagacaggctggttaaagtgaatggggagagcgtg
ctgggtaagacgtactcgcaggtcattgcactgattcagaacagtgagagtgtactggag
ctctccattatgccaaaggatgaggacgtgcttcagctggcatattcccatgatgcctac
ctaagggggaacaatccatatacaggaaaggcccaaaatcttcctccaccaccccctgtt
ctctaccctcctcgtacaaaatcacagtctcctgcagggttcagcccctgccctcctcca
gcttcttcacacatggggcaaaaccagctggacaactggagccgctggcccggctcttct
gctggtccctctccaccccttgacaaccggactgtggcctccagcaatgttgtctgggca
gccgagggcaggaattgtgagccgggtggtgttggtcacagtagccctgcacaccgaaca
gaggagatccagtatggaatgactgacagaggacagcagccaactggacaaatgagagga
cgctcatactcatcttcttcctcctcaggaggaatgatgagccctttgcatcatggtcat
cttgccaatcacaacatgggtactgccatggggcacactggaggtcgtaagggaagccca
ccttgggccagcccttctcagccaacatcaacaccttcatccagccgcaacgaacgaacc
caacaagccctttccaactggtactacagccaggtcccaggccgtgagcgagaacgagaa
cgagagcgggagcgatctagttctcgctcaatgcacccacgccacaggagtttctcacaa
gaccgtctgggagagcttgggaaggccaggcgttctcaacaagcaggttttccccatagt
gcatcgcaagacacgttgctgctgcttcagcagagtgctgcagcatatgctgatccttac
tggaaccatggagactggcggggtgagcatatgtatggtcagcacccatctgtggtggcc
tatgggcgaaagtcctccgaaaatcttctagcaagccggtacggacactcgggacgctca
ctggaaaatctcgacagagctgtggggatactctcaccaagggttgaaagatctgcttgg
gttcaacaacctccaaataggactgaagtctatgcaagacatgctgggcatttcggccaa
catatagagtcaccccaccaaatgcaccacacaccccaacaccaccagaatctcacacat
gcaacacaccaacactcatctcaaatcccacaacctcagcaggcagctccaatggcaaga
cgtttgccttcttgccagagtctagatgaggagccgattggctatcgtagctacagtccc
tcattcaataggaagactggccgtatcttgcagcaggcccagtcatttagagatccctct
tacacaggtccacacctttggactccaacatccaaaaccagtcccccagaggggcatcca
ccctcagccactgcttccccagccccaccaaccacttcctcttcaactacgatttccaca
ccatctgaaggacaagacagaacttaccgacccactaatcatgacagaggggcaggggaa
gcgacaagtgaagcccagacacaggaagtggttctgaggcagaaaccacctaccggccga
cgaggtgcaaacgcccttcgacacccacattatgcaatagcacttgactccagtgaccct
ctactctttaccactgaccctacggagcccactgccaaggcagaaagtgctatttctcat
cgccgcacagatgttaaccttcctccactatctattgaggatgactcccttgcatcaatt
ccattcatcgatgagccgaccagtccaagtgcagatctgcgggcacgtcatgtccccgcc
tcctccgtcgtgtccagtggcggtataaactccgcccctgctgtgatcacaagccccgcc
tccccaaccttcacctttcccctcaaccgccttttctcccacaactgcagtgatcctaaa
tctaatcgtcgctcctcgtacctgttggccatcaccactgaacgctccaagtcatgtgat
gaggggcttaacgcatatagagaagagggccgggtcttctcgaggcttccaaaaagagtc
aagagcttctttactgaagggtctctggacagtctgggtgctgctgaagaggctcgctct
aaacgacactctacctctgagctgggcaacatcagctacagtgacgtgaagagagaaggc
tggctccacttcaaacagatccacacggagaagggcaagaaggttggcagtgcaatctgg
ccatggagacgggtgttctctgtgcttaggacccattctctgtttctttataaagacaag
cgagaggcagtgcttaaaggggcgcaattagggggcggggctgaagacgagcagccaatc
agcatccggggctgccttgtggatatagcatacagtgaaacgaagcgcaagcacgcgctg
agattgaccacgcaggacttctgcgagtacctgctgcaggcggaggacagagaggacatg
ctggagtggatccgagtcatcagggacaacagcaagaccgacaacgaggaattgggtttc
tcacgacaagctctcatcaataaaaagcttaacgactacaggaagcaaagtccaacgggt
aacaaaccagactcctcacccagagtgcatcgaatgaccttcctcctcagcaagccagac
aacagcgcacctccacgctccccaaaacacgaggccaaagatgagagcagccccccaaaa
tctccctggggtataaacataatgaagaagagcaagaaggccggtcctaaagcttttggc
gtccgtctagaggactgccagcctgcagtaaacaacaagttcattcctcagattgtggag
atctgctgtgggctggtggaggacatgggtctggagtatacagggatctacagagtgcca
ggaaacaatgctgtagtctccagtctgcaggagcagctcaacaaaggagtagacattaac
atcactgaggagaaatggcaggacctgaatgtggtgagcagcctgctgaagtccttcttt
cgtaaactccctgaacccctcttcactgatgataaatataatgactttatcgacgccaat
cggatggagaacgccagcgataggctgaggacaatgaagaaattgattcgggacctacca
gatcattactttcacactctgaaatttttagttggacacctaaagacggtggctgaccac
tctgagaaaaacaaaatggagccgcgtaatttggctctggtgtttggccccactcttgtt
cgaacttcagaggacaacatgacagacatggtcacccacatgccagaccgctacaagatt
gtggagacactcattcagcattacacctggtttttctgcgaagaacaggataaggatgaa
aagaccccagtggacacagaggatgtccagcctgccccaaacattgatcatctgctctcc
aacattggccgcacaggcatgctgggtgaggcttcagactcaaccaacagtgattctgca
aaatctaaggggtcatggggatcaaaacgtgactttactgccaaggatatccttacatta
tcaattatgtcggctgtgacccgcaaacggcggaagcggcacaacggccgtctcctcggc
agcagcacagacgacgattctgagcatgaacccattaaatcctgcatctccgagaaagac
gatctgcaagagatggggcaggttgcatccttctgtgccccacgagcagagggagaggag
gatgacgatgaagaggaggaagatgatgaagaggaggaggagggggctgagagacagaag
gcacaagagcagaaggaaacagtagtccccagcatttcctcaacagaggaagtgacatca
acagtgctgctgagcgaagaggaagagcagaagtctgaagtgaaaggaggacgcagctgg
agattagatgatgctcggtctattgtgtcaggctactctactctgtccactttggggcgg
agcttagcttcagaggggcggggcgaggatgcagatgatgagcatagtgaactagtgagt
gaaactgataatgaaagcgggtttgcctcacgctccctcacccaagaaaggccagaaaaa
ccaaaccgttccaaccagaactctcatgcgtctcctgaaccaaccgcaccacagagtttc
ctctatgcgcactgcaaatcacctacaccctctggctccgccactgctccatctccccct
tcacaacacatcacaaccaacccagaggacagcgcagcacgctcgtctactccctcaacc
tcctcttactcctcatccgcctcacaacggctccacaaccgctctttcaactcccaccgc
ctcatacagtgcgacacccttgcacgccgtcggacaaaggcggacaaagccaaagctccc
tcagtggacctttccgaactctcgagctcctccgccgcagaggaggaccgccagtcaggt
gccaatcaaatccctgactcctctccgtctccttcttcaaaagccaaagggtttagcata
agaaacgagtgtacgccaatatccatggttggtcccggaagtaaggggtgtgtgttgtcc
cccgggcaaggatccctggcggatcaggtacgtgctcgtctaatgggctcggcggatgac
ctgtgcagcgttggcctgagaaagcagctctcgccggagacgcgccggaagagacgcgct
tggaggagacacacagtggtcgtgtcccctacggattgttcagacaaaaagccaacggtc
caaagcaccaaacctctagcttcaccctcccctgttgaaaagcaggatgtcagagagtcc
cacccagagtgctcagaaactgaagcccctactgcacgtcgggccgtgcctacctcgcgc
tttcgtgatttcttgtag
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integrated database retrieval system
