Danio rerio (zebrafish): 100006622
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Entry
100006622 CDS
T01004
Symbol
rin2a
Name
(RefSeq) ras and Rab interactor 2 isoform X1
KO
K23687
Ras and Rab interactor 2/3
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
100006622 (rin2a)
Membrane trafficking [BR:
dre04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100006622 (rin2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
RA_2
FERM_f0
Lpg0393_VPS9
RA_3
TUG-UBL1
SH2
Motif
Other DBs
NCBI-GeneID:
100006622
NCBI-ProteinID:
XP_001345314
ZFIN:
ZDB-GENE-090312-194
Ensembl:
ENSDARG00000074589
UniProt:
E7F662
LinkDB
All DBs
Position
13:27232791..27296950
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AA seq
938 aa
AA seq
DB search
MSVEMMMQSCLMDRSSSFFKLIDTFSTEISELKQEMVQPAREPETEILQGLEGEVSGLFL
QSSACAGVPGVRDSGYDSLRRRMSMLDRLMQTHSVWLLLSLSDDEARHILQPQPAGSFVV
RRCYKLQKKVISLRMDSDTLIVRDFPVKESQYTFSLEGSGISFADLFRLVAFCCISRDVL
PFTLKLPEAIASAKTPTDLEEVAKLGKGFWDSELCNKNKSSVSGETACDGSKQRLKRSPA
VPFTRTPSELECSQSNGALCFINPLFLQTHQSNPSPKKQEPSPGDEGGGSQHHHRALHRT
GQQQGDSSVFCRKTPSKPHISVSRSESERSPPPRPPPPRFGSSRSAVLRKQKTMPETVCW
IKTPQEKTSLLGRLGSSFISLSPSSSPPKKFSKPILVPSARNKNSSGLLDADGIRCHMAL
DDQTIEDAVSWSLAKLSSRNPTAMENGSPAHEHCSTGRERLSDISISTSSSDSLDFSHSF
PLPMEASPSKTDRPTGDSSQEEEEDDGINLESDQEVPSPFKSKKQNSAGTFVLPRALRGQ
LRKMSDVLNSLMTPERRAIRKIVEQSRDKGTYFGCLVQDYVSFLQENRGCHTSGLELLQT
LRQFMTQMKSYLLQSSELDPPIESLIPEDQIDQVMEKAMHKCVLKPLKPVIEAALRDFQL
SSGTMQQLKENLLLAKAKQPQEMGVDGARPPDPVAIEKIRHKFNNMCKMYSPEKKVSLLL
SVCKLIYTIMENNSGRMYGADDFLPMLTYVMAQCDMPELDTEIQYMMELLDPSLLHGEGG
YYLTSAYGAMSLIKNFQEDQAARELSSETRNTLHQWHRRRTTQRTTPSVDDFQNYLRVAL
QDASSGCTAKTLQVQPYATTEDVCQICADKFKISDPENYALFLLTEETTQQLTLDTHPQK
IKAELHSRPQPQIFYFVYRQIQNFPVLSEQLDDNTSAN
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagagatgatgatgcagtcctgccttatggaccggagcagcagcttctttaag
ctgattgacacattctcaacggagatctcagagttgaagcaggagatggttcagccagcc
agagagccggagactgaaatcttacagggtctggaaggagaggtgagtggtctattcctg
cagtcgtctgcctgtgctggtgtgccaggagtgagggattctggatatgattcattacgc
agacgcatgagcatgctggacagactgatgcagacacactctgtatggctgctgctgtca
ctcagcgatgatgaagccagacacattctgcagccgcagccggcagggagttttgtggta
aggaggtgttataaactgcagaaaaaggtgatttccctccggatggacagtgacacattg
attgttcgggactttcctgttaaagagagtcaatatactttttccctggagggctcagga
atcagctttgcagacctctttcgtctggtggcgttctgctgtatcagcagagacgttctg
cccttcaccctgaagcttcctgaagctattgcgtctgcaaagaccccaacagatctagag
gaagtggctaagttgggaaaaggtttttgggactcggaactgtgcaataagaacaagtct
tctgtgtctggggaaactgcttgtgatggttcaaaacagagactaaaaagaagtccagcc
gtcccgtttacccggaccccttctgaacttgaatgcagccaatccaacggtgcactttgc
ttcatcaatcccctcttcctgcagacacaccaatctaacccttcacccaaaaagcaagaa
ccatccccaggtgacgaaggtggtggctctcagcaccaccacagagctctgcacagaaca
ggtcagcagcaaggggacagcagcgtattctgccgtaaaacaccaagcaaaccccacata
agtgtgagcagatctgagagcgagagatcaccgccgcctaggcctccacctccacgtttt
ggttccagcagatcagcagttcttcgcaaacagaagaccatgcctgaaacagtttgttgg
atcaaaacacctcaggaaaagaccagcctgctggggagattgggatcatccttcatttcc
ttatctccctcatcctccccaccgaaaaagttcagcaaacccatcctggtgccctcggcc
cgcaataagaactcctccggtctgcttgatgcggacggtatccgatgccacatggctttg
gatgatcaaaccattgaggatgcagtgtcttggagtctggccaagctatcctctcgtaac
cccactgccatggagaatggcagccccgcgcatgagcactgctccaccgggcgagagcgt
ctgagcgacatcagcatctccacctcgtcttcagactctcttgacttctcccacagcttt
ccactccccatggaggccagtccctccaaaacggaccgtcccactggcgacagcagccaa
gaagaggaagaagatgatggtatcaatttggagagtgatcaagaggtgccttcacctttt
aaatcaaagaagcagaacagcgcagggacatttgtgttgccgcgagcactgagaggacag
ttgcgcaagatgagcgacgttctcaattctctgatgacgcccgaaaggagagccattcgg
aagatcgttgagcagtctagggataaaggcacttactttggctgcctcgtgcaggactac
gtgagtttcctgcaggagaaccggggatgccacacatcaggcttggaactgcttcagaca
ctcagacagttcatgacccagatgaagtcctacttgttgcagagctcagagcttgaccca
cccattgagtcgcttatcccggaggatcaaatcgatcaggtaatggagaaagccatgcac
aagtgtgtgctgaagccgctgaagcctgtgatcgaggcagctctgcgagacttccagttg
agcagcggcaccatgcagcagctgaaggagaatctgcttctggccaaagccaagcagccg
caggaaatgggtgtagatggagctcggccccccgacccggtggccatagagaagatccga
cacaaattcaacaacatgtgcaagatgtactcaccagagaagaaagtgtctctgctgctc
agtgtgtgcaaacttatctacaccatcatggagaacaactcagggaggatgtatggggcg
gatgatttcttgcccatgctgacatatgtgatggcccagtgcgacatgccagagctggat
actgaaatacagtacatgatggagctactggacccgtcgctgctgcatggagaaggaggt
tattacctgaccagtgcatatggtgcaatgtctctgatcaagaacttccaggaggatcag
gctgctcgtgagctgagctccgagaccagaaacacactgcaccagtggcaccgcagacgc
acaactcagagaaccacaccatctgtggatgatttccagaactatttgcgggtggcactg
caagatgcaagcagcggctgcacagccaaaacccttcaggttcagccttatgccacaaca
gaggacgtgtgtcagatctgcgcagacaagtttaaaatctcagacccggaaaactacgct
cttttcctcctgacagaagaaaccacgcagcagctgacgctcgacacgcacccgcagaag
atcaaggctgaactgcacagccggccgcagccacagatcttctacttcgtttaccggcag
atccaaaacttccccgtcctgtcagaacagctcgacgacaacacttcagcaaactga
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