KEGG   Danio rerio (zebrafish): 100034477
Entry
100034477         CDS       T01004                                 
Symbol
ubap2l
Name
(RefSeq) ubiquitin-associated protein 2-like
  KO
K26545  ubiquitin-associated protein 2
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    100034477 (ubap2l)
   03400 DNA repair and recombination proteins [BR:dre03400]
    100034477 (ubap2l)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    100034477 (ubap2l)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     100034477 (ubap2l)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 UBA_8 GIP1_N CUE
Other DBs
NCBI-GeneID: 100034477
NCBI-ProteinID: NP_001076535
ZFIN: ZDB-GENE-060503-244
Ensembl: ENSDARG00000063219
UniProt: Q1L8T3
LinkDB
Position
19:7757618..7797957
AA seq 1144 aa
MMTSVGGSRARGNWEQTQGQTQSQSQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLV
DITGKDQDESMIALHDCNGDVNRAINVLLEGSPDTDSWEMVGKKKVSGQKESAQTDGGDE
GKENRERGGERDVARRRGGAPRRGRGASRGREFRGQENGLDGAKAGGVAGRGTERGRRGR
GRGRGGAGRRGGRFSAQGMGTFNPADYTEPAQTEESYTSGSTWSNTGNLEPEDGNRLEFT
GGEGTNYPLKFDSAPGAWRTATEEWGTEDWNEDLSETKIFTASSVASMPIPQENVTITAG
QRIDLAVLLGKTPPSSSEAEPASLEGPQPQSLSQSLVFSNSKQTSSLSQSSSSAPYSQHN
MVSMLGKGFGDVGDPKTTTGGSTTGSQFLEQFKTAQALAQLAAQHSQSGPPNAGPSTWDT
SPSALGQYDMKPQTEPVHSPFTKRQPYQPASTTTSMMDAFLQDKTTGPSSTSALPPQSTQ
ASSLAQAITTPVSKPMGAAPGQQNSSSPADPQASSPLPLQQHKLKQQKKRASITTKIPAL
AVEMPGSADISGLNLQFGALQFGSEPVLPEYDASAAVATTTPGNQGQNSLYTSASNEQAT
ALSNPSQMELYESRANQTRRYPPSVSSSPQKDMQTKNGFSSIQTSQSLEAAAGSAVPVKP
VSESVVPPSVSNMVSLADPSSGPTSLLTTSNQTPLSALSHEDVSPSSLATQHNNSLSTQQ
NSLAPSSVRTSNTSLLHPVDGDSSLHSSSFSVSAVAPSSVPPPSSITSVAPVSHSGPVVP
PSSVSLVSTQSSMGPVSLAMGLNNAVVSMVPPSAAASSSSSAASASAAPSSASLSRSTAA
SGKAPPNLPPGVPPLLPNPYIMAPGLLHPYPPQVYGYDDLQMLQTRIPLDYYSIPFATPT
TALTGREGGLTSNPYSAGDLSKFGRNDASSPAPATTLAQPQQTQTQTHHTTQQPFLNPAL
PPGYSYTSLPYYTGVPGLPNTFQYGPAMFPVAPTSSKQHGVNVGVNASATAFQQASGYGS
HGYSTGVSVTSSNTGVPDISGSVYTKTQSFEKQGFHTGTPSASFSLPSALGSAGPINPPA
AAGYAPAPYMHILTPHQQPHSQMLHHHLQQDGQSGSGQRSQNASIQQKSQINKSGYNSYN
WGGN
NT seq 3435 nt   +upstreamnt  +downstreamnt
atgatgacttcagtgggcggaagccgggcccggggcaactgggagcagacgcagggtcag
acacagagccagtcacagcacaagcagaggccccaggccaccgctgagcagatccgactc
gcgcagatgatctcagaccataatgatgcagactttgaggagaaggtcaaacagctggtt
gacatcacaggaaaggatcaagatgagtccatgatagcgcttcatgactgcaatggagac
gtcaacagagccatcaacgtcctgttggagggcagccctgacactgattcatgggagatg
gttggaaagaagaaagtttcaggtcagaaggaaagcgcacagacagatggaggagacgaa
ggaaaggagaatcgagagagaggaggagaaagagatgtggcacgtcgcagaggaggagcc
ccgcggaggggccgtggagccagccgcggacgagagttccgtgggcaggagaatggtttg
gatggggccaaggcaggtggagtcgcgggcaggggaactgagcgaggccgtcggggaaga
ggcagaggaagaggtggagctggaaggcgaggagggaggttttcagctcagggcatgggt
acattcaacccagcggactacactgagccagctcaaacagaggagagctacacaagcggc
agcacttggagtaacacaggcaatctggaacctgaagatggaaacaggcttgagtttaca
ggtggagagggaacaaactatcctctgaagtttgactccgcccctggtgcttggagaact
gccacggaagagtggggcacggaggactggaatgaggatttgtcagagaccaagatattc
actgcctccagtgtggcatccatgcccattccacaggagaatgtcaccattactgctgga
cagaggattgatctggctgtcttgctggggaagacgcctccctcttcctctgaagcagag
cctgcttcacttgaaggcccacagccacaatctctgtctcagtctctagtgttcagcaac
tcaaagcagacatcatcactgtctcagtcctcctccagtgctccttacagccagcacaac
atggtgagcatgctcggtaagggttttggggatgttggtgatccaaaaacaaccactgga
ggttcgacgactggttctcaatttctggagcagtttaagactgcccaggctttggcccag
ctggcggcccagcactcacaaagtggaccacccaatgctggtccttctacctgggatacc
agcccatctgcactggggcaatatgatatgaaacctcaaacagagcctgtgcacagtcca
ttcaccaaacggcagccctatcagccagcctccaccaccacctctatgatggatgccttc
ttgcaggacaaaaccacaggcccttctagcacctcagctctaccccctcagtccacccag
gcatcttcactggcccaggccatcaccaccccagtctccaaacccatgggagctgctcca
ggacagcagaactcttccagcccagctgacccgcaggcgtccagcccactccccctgcag
cagcacaaactcaaacagcagaagaagagggcttccatcacgaccaagattccggctctg
gcagtggagatgccaggttctgcggacatatccggactcaacctgcagtttggagcatta
cagtttggctctgaaccggtgcttcccgagtatgatgcctctgcagctgttgccacgaca
acaccaggcaaccaaggccagaacagcctttacacgagtgctagcaatgagcaagcaaca
gccctgtccaaccccagtcagatggagctatacgagtcaagagccaatcagacgcggcgg
taccctccctctgtgtcctcctccccacagaaagacatgcagacaaagaatgggttcagc
tcgatacagacgtcacaatctctggaggctgcagcaggctctgcagtgcccgtgaagcca
gtgtctgaatcagtcgtcccgccatcggtttccaacatggtgtcattggcagacccctca
tcaggccctacttccctgttgactacgtccaatcagactcctctcagtgctctcagccat
gaagacgtctcgcccagctcattggccactcagcacaacaactccctttctacacagcaa
aacagtttggcaccttcttcagttcgcacttcaaacacaagtctgctgcacccagtggac
ggcgattccagcttgcactcctcatccttctctgtctcagctgtggctccgtcttcagtt
cctccaccatcttcaattacttcagtggcccccgtttctcacagtggtccagttgtacct
ccttcatctgtcagcttggtctcgacacagtcatccatggggccggtcagtctggcaatg
gggttgaacaatgctgtggtttcaatggtacctccttcagctgctgcatcttcatcatcc
tctgctgcctctgcctctgcggcaccttcatctgcctcgttgtctcgcagcacggctgcc
tcagggaaagcacctccaaacctgccacctggagtgccgccactgctgcccaacccttac
attatggctcctggcctgcttcacccatacccaccgcaagtttatggctacgatgatttg
cagatgctgcagaccagaataccactggactattacagcatcccgtttgccactccaacc
acagcactgacaggcagggaaggcggtttgacaagtaacccttattctgctggggacctg
tcgaagtttggacgtaatgatgcatcgtctcctgcccccgccacaacactggcccagccc
cagcaaactcagacacaaacgcaccacaccacccagcagcccttcctcaacccagccctt
ccaccaggatacagttacaccagcctgccctattacactggtgtgcccggcctgcccaac
accttccagtacggccctgccatgtttccggtggctcctacctcctccaaacagcacggt
gtgaatgttggtgtcaatgcatcagctacggccttccagcaagctagtggttatggatca
catggatatagcactggagtctctgtgacatcaagcaacacgggagtccctgatatttca
ggctctgtttacacaaagacgcagtcttttgagaagcagggtttccacacaggaaccccc
agcgcttccttcagtttgccgtcggctctcggcagcgcaggccccatcaaccctcctgct
gcagcgggttacgctcccgctccatacatgcacatcctgacgccgcatcagcagccacac
tcacagatgctccaccaccatctgcagcaggacggacagagtggctctggacagcgcagt
cagaacgcctccattcaacagaagtcccagatcaacaaatctggatacaacagctacaac
tggggaggcaattaa

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