Danio rerio (zebrafish): 100037372
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Entry
100037372 CDS
T01004
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100037372 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
100037372 (cnot2)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100037372 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100037372 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
100037372
NCBI-ProteinID:
NP_001082993
ZFIN:
ZDB-GENE-070410-70
Ensembl:
ENSDARG00000061802
UniProt:
A4QN63
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All DBs
Position
25:31058665..31093709
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AA seq
520 aa
AA seq
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MFGATRKKFDGVESDYPDESMYYNQASMFQHRSEKDMLPSPSPSSSGQLSQLGASLYGPQ
SALGFSIRGMSNNNPQLNRSLTQGTQLPSHSTPTTGVPTMSLHTTPPSPNRGILPMNTRN
MMSSQVGQGMGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQPFTINSMSGFGMGRS
QGFGMNSLSNNIFNGTDGSENVTGIDLSEFPALADRSRREGNGNPTPLHNPLAGRAPYVG
MVTKPSNEQSQDFSIHNEDFPALPGPNYKDPTLSTDESKSSLNSSGKGSSSADGPKFPGD
KTSSAQNNNQQKKGIQVLPDGKVTNIPSGMVTDQFGMIGLLTFIRAAETDPGMVHLALGS
DLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYG
EDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGTYY
FFDCHNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtgcaacgagaaagaagtttgatggggtcgaaagtgactaccctgatgagagc
atgtactataaccaggcatctatgttccagcatcgatcggagaaagacatgctgccgtct
ccctcgccgtcatcgtcaggtcaattgtcacagcttggtgcaagtttgtacggtcctcaa
agtgcactaggattctcaataaggggcatgagcaacaacaaccctcaattgaaccggagt
ttaacacaaggcactcagttaccgagccatagcaccccaacgacaggcgtcccaacaatg
tccctccacacaacaccaccttcgccgaacagggggatcctacccatgaacaccaggaac
atgatgagctcgcaggtagggcagggcatgggtatgagcggcaggaccaacagtatgggc
agttctggcctgggcagcccaaaccgcagctctcccagcattatctgcatgcccaagcag
cagccagcacgccagccattcaccatcaacagtatgtcaggatttggaatgggccggagc
caggggtttggaatgaactccttatccaataacatcttcaacgggacagatgggagtgaa
aacgtgacaggaatagatctctcagaattcccagcacttgcagacagaagtcggagggag
ggaaatggcaaccctacaccgttgcataatccactggctggaagggcgccctatgttgga
atggtcacaaagccatcgaacgaacagtcgcaggacttttcaattcacaacgaagacttc
ccagccctgcctggccccaactataaggacccgacattaagcacggatgaaagcaaatca
agcttaaactcttcaggcaaaggcagctcgagtgcagatggacccaagtttcccggtgac
aagacatcatcagcacagaataacaaccagcagaagaaagggatccaggtgttgcctgac
ggcaaggtaacgaacattccctcaggaatggtgacagatcagtttggaatgattggactc
ttgacattcattagggcagctgagacagatcctgggatggttcacctagccttaggaagt
gacctaacaacgctaggactcaaccttaactctccagagaatctgtatcccaagtttgca
tctccttgggcttcagctccatgtcggccacaagacattgacttccatgttccttcagag
tacttaaccaacattcacataagggacaagctggctgcaataaaactggggcgatatggt
gaagacctgctgttctacctctactacatgaacggaggagacctcttacaactcctcgct
gccgttgaactcttcaaccgggactggcggtaccataaagaggaaagagtttggatcaca
agagcacctggcatggagcccacgctaaagaccaacacttacgagagaggaacatattac
ttcttcgattgtcataactggaggaaggtcgctaaggagtttcacctggaatacgacaag
ctagaagagcggcctcacgtgccaacaaccttcaattacaatccggcccagcaggccttc
tga
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