Danio rerio (zebrafish): 100038773
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Entry
100038773 CDS
T01004
Symbol
rfx1a
Name
(RefSeq) MHC class II regulatory factor RFX1a
KO
K09173
regulatory factor X 1/2/3
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
100038773 (rfx1a)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Other basic domains
RF-X
100038773 (rfx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
100038773
NCBI-ProteinID:
NP_001083022
ZFIN:
ZDB-GENE-070424-94
Ensembl:
ENSDARG00000005883
UniProt:
A4QP58
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All DBs
Position
3:complement(17935048..17998623)
Genome browser
AA seq
897 aa
AA seq
DB search
MATPAYVRELQQTSQPQGGSVTPTSGQASTVTAGPQQFLAELQTTGATPSAAPPTGRTTP
PTSQAQKSQAIAQAPPTQAPPTQTQYVTAEIQSSPTQSSNAQNTPQYIVVTVTEGSLHSS
DSVSDSSPPAAVVQTGVPTQVVQQVQSAQQRSVVQATSQTTKTEPGTQLNVTSLQSVHLT
QEVQQQLQQVPVQHVYTNQVQYVEGGEANYTTSTIRSSSFPYTETPLYTQSSAGQYYEAT
PASGSEAASPGTPLTVSVTSGSPGVPMFVAGTGQIVANPTTAAGSGVTAVVAAAGTAANG
SGESAGEPNGSGGSYVIQGGYMLAGTGTGSSGNGHGYPHPTRASPATLSSGPQVQWLLDN
YETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKCH
YYGLRIKASSSLLRLMEDQQHLAMRQQPFSQKQRLKPVQKVEGITNGMSSGSGQQQQQQQ
SSGLSDISTQVQQYQQFLDASKALPEFPDVDLQGKALPEGIELEHLKSFQLLYREHCEAI
LDVMVNLQFPLVETLWKTFWRFSENQAGDSATLAVHDESEKRLPKTCLVILCKYEPVLRW
SRDCDNTLYQGLVEMLIPDVLRPIPSALTQAIRNFAKSLESWLTNAMVNIPEEMVRVKVT
SASAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRCEDR
VVQRLEQDFKLTLQQQNSLEQWAAWLDGVVSQVLKPYQSSAALPKAAKLFLLKWSFYSSM
VIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFASLGRSLNPL
DPDKEEEEEEEEESDDECQELSLQSDVGAMGDESLEPPAKLARTDQRVLFTTGSMEN
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcaactccagcatacgtgagggagctgcagcagacctcccagcctcaggggggcagt
gtcactcctacatcaggacaggcctctactgtgacggcgggtcctcagcaattcctggct
gaacttcagactacaggagccacgccctcagcagccccgccaactggtcggaccacacct
cccacctcacaagcacagaagagccaggcgattgcacaggctccacccacacaagccccg
cccactcaaactcagtacgtcacggctgagattcagagctcacctacacagtccagcaat
gctcagaatacaccgcagtacattgttgtcacagttacagagggttctctacactctagt
gactctgtgtcagattccagtcctcctgctgctgtggtccagactggagttcccacacag
gtggtgcagcaagtacagtcagcccaacagaggtcagtagttcaagccacatctcagaca
acaaaaacagagccgggcacgcagctgaatgtcaccagcctacagtccgtgcacctgaca
caggaggtacagcagcagctccagcaggtgcctgtccagcatgtgtacactaaccaggtg
cagtatgtggaaggaggagaagcaaactacaccaccagcaccattcgttccagcagtttc
ccctacacagagacccctctgtacacccagagcagtgcgggacagtactacgaggccacc
cctgcctctggatctgaagccgcatcccccggcacgcctctcaccgtctctgtcacctca
ggatctccaggtgtgcccatgtttgtggcagggacggggcagattgtggccaaccccacc
acagcggcaggcagtggggtcactgcagtagtagcagctgcggggacggcagctaacggc
tctggagaatctgccggagaggctaacggtagtggcggcagctatgtgatccaaggtggc
tacatgttggccggcaccgggagtggtagcagtggaaacggtcacgggtacccgcacccc
actcgcgcttctccagccaccctgtcctctggccctcaggtgcagtggttgttggataat
tatgagacagcagaaggagtgagtttgcccaggtctacactttactgccactacctgctg
cactgtcaggagcagaagctggagccagttaatgctgcatcctttgggaaactgatccgt
tctgtgttcatgggcttgaggaccagacgtctgggcacacgagggaattccaaatatcac
tactatggcctgcggatcaaagcgagctcctctctgctccggctgatggaggaccagcag
cacctggccatgagacagcagcccttctcccagaaacagaggttgaagccagttcagaag
gtggagggaatcaccaacgggatgtcgtcaggatctggacagcagcagcagcagcagcag
agctcgggtttgtcggacatcagcacacaggtccagcagtaccagcagtttctcgatgcg
tccaaagctctcccagagtttcctgatgttgacctgcagggtaaagctttaccagagggc
attgagctggaacatctcaagagttttcagctgctctacagagaacactgcgaagccatt
ctggacgtgatggtcaaccttcagttccctttggtggaaactctttggaaaacgttttgg
aggttcagtgaaaatcaggcaggagactcggcaacactagctgtgcacgatgagtcggag
aagaggctacccaagacatgcttggtgattctctgtaaatatgagccggtgcttcgctgg
agtcgtgactgcgacaacacactgtaccaaggcctggtggagatgctcatcccagacgtt
ctgagacctattcccagtgccttaacacaagccatccgaaactttgccaagagtcttgag
agctggttgactaatgccatggtgaacattcctgaagagatggttcgtgtcaaggtgaca
tctgcaagtgcgtttgctcagactctgcgcagatacacctctctaaaccacctggctcag
gcagctcgagccgtcctgcaaaacactgcgcagatcaaccagatgctcagcgacctcaac
agagtggattttgcaaatgtgcaggaacaggcctcatgggtgtgccggtgtgaggaccgg
gtggtgcagcggcttgagcaggactttaagctgacccttcagcagcagaactctctggag
cagtgggccgcctggctggatggggtggtctcgcaggtcctaaagccctaccagtccagc
gctgctcttccaaaagcagctaaactcttcttgctgaagtggagcttttacagctctatg
gtgatccgagatctgactctccgcagtgctgccagcttcggctcttttcacctaatccgt
ctgctctacgatgagtacatgtactatctgatagagcacagggttgcccaggccaagggt
gaaacaccgattgctgtcatgggagagtttgcaagtcttggccgaagtctgaacccactt
gatcctgataaagaagaggaagaggaggaggaagaagagagtgatgatgagtgtcaggag
ttatctctgcagtcagacgtgggtgcgatgggggacgaatctctggaaccgcctgctaaa
ctggcccgaaccgaccagagggtgttgttcaccacaggaagcatggaaaactga
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