Danio rerio (zebrafish): 100141346
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Entry
100141346 CDS
T01004
Symbol
itga8
Name
(RefSeq) integrin alpha-8
KO
K06584
integrin alpha 8
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04510
Focal adhesion
dre04512
ECM-receptor interaction
dre04514
Cell adhesion molecules
dre04810
Regulation of actin cytoskeleton
dre04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100141346 (itga8)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100141346 (itga8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
100141346 (itga8)
Cell adhesion molecules [BR:
dre04515
]
Integrins
Integrin alpha subunits
100141346 (itga8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
DUF1912
Motif
Other DBs
NCBI-GeneID:
100141346
NCBI-ProteinID:
XP_021322596
ZFIN:
ZDB-GENE-080220-48
Ensembl:
ENSDARG00000078717
UniProt:
A0A8M9PK29
LinkDB
All DBs
Position
16:28383776..28514012
Genome browser
AA seq
1059 aa
AA seq
DB search
MDYTRTHRAEAMHSCLSRMRFRCFFLMLSFFCEAAAFNLDLEKPTVYNGPEGSYFGYSLD
FYHPTQDRNVMSVLVGAPKANTSQPGIVEGGAVYYCPWPASDPDSCRQIPFDKANNRMIK
VNGTREPLEFKSHQWFGATVRTHKGKVVACAPLYQWRTVKVSSEMDPVGTCYVAVQNFSA
YAEYSPCRTNNPDPEGQGFCQAGFSVDFTKEGTLVVGGPGSFYWQGQVITAGVAEILNGY
SLKTILRKVQGEKQTVAASDTYDDSYLGYSVAVGEFTGDSEQELVAGVPRGAHNFGYVTV
INATNLTFIQNFTGEQMASYFGYTIAVTDLNGDGLDDVLVGAPLYMDREFESKPREVGRV
YLYLQEDVLLFSPPITLTGMHLFGRYGSAIAPLGDINQDGYLDVAIGAPFAGEDRGGRVF
IYNGQKSGLMLQASQVLKGDWASSGIPAGFGFTLRGDSDLDNNQYPDLLVGAFGVSKVVA
YRSRPVVTVDAQLILRPRILNPEDKSCRMPNSDIMVTCLSVNVCAKISGIGIPDYVALRM
ELQLDWLKQRGAVKRVLFMDSHQHQRSQQLVLGQGDRQHCHNYSVYLRDEAEFRDKLSPI
SVTLNYSLDQSSPPAGLQLRPVLDHYSKTFHHEQANILLDCGEDNMCIPDLKLSAKMDRT
ELIIGDDNLLMLTINAANEGEGAYEAELHVTLPPEADYIGVERRREDLQRLNCEHRTEND
TRIVVCDLGNPMVADTNLSVGLRFSVARLEDAPPTIGFEVQIHSSNKDNSRSVPVNLTLS
IVARAEVEIRGVSHPAQVVLPFPRWEPKEKPVREDEVGPQVQHIYELHNKGPSSISRTVL
EVGWPSRYREEHLLYALQVITDGPVHCSTNSSLNPLELETSTLQDTPELLGFLRNSSGVT
RRRRSVSIGQSYNSKTLNCSNINCLMVECVVDRLDRGQSAVIKFRSRLWAYTFLQRRNDH
YTLNSTVSFQVTAMPYRIKAETLPRQSKSIGTFVVWAIPDVSFAIPLWVIILAILLGLLV
LAVLSLAMWKCGFFDRARPPKDDDVSDREQLTAEKSTDA
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggattacactcggacacacagggctgaagccatgcactcttgtttgtcccgcatgcgt
tttcgatgctttttcctcatgttgtcatttttttgcgaagctgcagcttttaacctggat
ttagaaaagcccacggtttacaatggacctgagggaagttattttggatactcactggac
ttttaccacccaacacaggatagaaacgtcatgtcggtgttggttggggctcctaaagcg
aacacctctcagccggggattgtggagggaggagcggtgtactactgcccctggccggca
tcagacccagactcctgccgccagatcccctttgataaagcaaataaccgtatgattaaa
gtgaacgggacacgagagcctctagaatttaaatcccatcagtggtttggagcaacagtc
aggacccacaaaggcaaagtggtggcctgtgctcccctctatcaatggaggacagtgaag
gtcagcagtgagatggatcctgtgggaacctgttatgtggctgtgcagaactttagtgcc
tatgctgagtattcaccctgtagaaccaataacccagacccagagggccagggcttctgc
caggcgggcttcagtgttgattttactaaggaagggactctggtcgtgggaggaccaggg
agtttctactggcaaggccaagtgataacagccggagttgccgagatattaaacggctat
tctctgaaaacaatcctgcgtaaagttcaaggagaaaagcagacggtggcagcatcagac
acgtacgatgacagttaccttggatattctgtagcggttggagagttcacaggggattcg
gaacaagaattggtagcaggggttcctcgaggggcacacaactttggttatgtgacagtg
atcaatgcaacaaacctgacgttcattcagaactttactggagagcagatggcctcttac
tttggatacaccattgcagtgactgatctaaatggagatgggttagacgacgtgctagtt
ggagctccactctatatggaccgcgagtttgagagtaagcctcgagaggtgggccgggtt
tatttatatctgcaagaagatgtgcttctcttctctcctcccatcacactcactggaatg
cacctgtttggccgctatggaagtgccattgctcctcttggagatatcaaccaggatggc
tatcttgacgtggctataggggctccattcgccggggaggatcgtggtggcagagtcttt
atctataatgggcagaaatccggcctgatgttacaggcttctcaagtgctgaaaggcgac
tgggcctcatctggcatcccagcaggctttggattcacccttcgtggagattctgacctc
gacaacaaccagtaccctgatttgctggtcggtgcatttggagtgagtaaagtcgtggcc
tacaggtcaagaccagtggtgaccgtggatgctcagctgattttaagacccagaatcctt
aacccagaggacaagtcttgccgaatgcccaattctgatatcatggtaacctgcctgtca
gtaaatgtgtgtgcaaagatctctgggattggtattcctgattatgtagctctgcggatg
gagctacagctggactggctgaagcagcgtggagcagtaaagcgggtcttgttcatggac
tctcaccaacaccagcggagccagcagctggttctgggtcaaggggaccgccagcactgc
cacaactactctgtgtacctgcgggatgaggccgagttcagggataaactgagtcctatc
agcgtgacactgaactacagtctggaccaaagctctcctcctgctggcctacagctgcgg
cctgtgttggatcactacagcaagaccttccaccacgagcaggcaaacatcctgttggac
tgtggagaagacaacatgtgcatcccagatctcaaactctctgctaaaatggaccggact
gagcttataatcggggatgacaacttgctgatgttgactattaatgcagccaatgagggt
gagggggcgtatgaggcggagcttcacgtgaccctcccaccagaggcagattatataggt
gtggagcgtaggcgtgaggatcttcagcggctgaactgtgaacacaggacggagaatgac
accaggattgtggtgtgtgatctggggaacccaatggttgctgatacaaatttgtcggtg
ggtttacggttttccgtggcgaggctggaggacgcccctcctaccattggctttgaggtg
cagatccacagctctaacaaggacaactcaagaagtgtcccagtgaatttgactctaagc
attgtggcaagagcagaggtggagataagaggtgtgtctcatcccgctcaggttgttttg
cctttccctcgatgggagcccaaagagaaacctgtgagagaggatgaagtcggtcctcag
gttcagcacatatatgagttacataacaaaggtccgagttcaataagcaggacagtgctg
gaggtgggctggcccagtcgctaccgtgaagagcaccttctctatgcacttcaggtcatt
actgacggaccggttcactgcagcaccaacagctccctcaacccactggagttggagacc
tcgactcttcaggacactccagagttactgggcttcctgaggaacagcagcggagtgacc
cgccgaagacgatctgtttctataggccaaagctacaacagcaaaacactgaactgctcg
aatatcaactgtctgatggtggagtgtgtagtggaccgtctggatcgagggcaaagtgca
gtgatcaagttcagatctcgactctgggcttacaccttcttacagagaaggaatgaccac
tacacgctaaactccacagtgtcctttcaagtgacggccatgccttatcgcatcaaagct
gagacactcccacgccagagcaaatcaatcggcacgtttgtggtgtgggccattcctgac
gtctcctttgccattcccctgtgggtcataattctggctatactgctgggactgctggtg
ctggcagtgcttagcctagcaatgtggaagtgtggcttcttcgatcgtgcgcggccaccc
aaagatgatgacgtgtcagaccgcgagcagctgaccgcagaaaaatccacagacgcgtga
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integrated database retrieval system