Danio rerio (zebrafish): 100141358
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Entry
100141358 CDS
T01004
Symbol
arid1aa
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100141358 (arid1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
100141358 (arid1aa)
03021 Transcription machinery [BR:
dre03021
]
100141358 (arid1aa)
03036 Chromosome and associated proteins [BR:
dre03036
]
100141358 (arid1aa)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
ARID
100141358 (arid1aa)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100141358 (arid1aa)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100141358 (arid1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
100141358
NCBI-ProteinID:
XP_021322624
ZFIN:
ZDB-GENE-080220-35
Ensembl:
ENSDARG00000101710
UniProt:
A0A8M9PDQ2
LinkDB
All DBs
Position
16:33953398..33986794
Genome browser
AA seq
2285 aa
AA seq
DB search
MAAQVASATSLNTSPPSELKKPDRDPKEESVPGEKQQENKEPGLESGSPARGELQDRADV
GNAGGGGESEMKNGNGNPSRVNNNQNDSTGAEGNNHPGMVHHHAPGYQPASYSYAQHYGR
APFHQHGGQQSPGMAAAAGPGALSGSMMDPYQPNSHDHSFPNHQYNSYSPFGNRSPYPGQ
GYGMSSPRSAPQAQAVGGQSAKQQQPAAAASYSNQRYNMGNPQPTSTPTLNQLLTSPSGA
RSYPNYPPSDYNSQDGAKGPADMASSGGQYGGGHPGWQQRSHHPPPMSPGSTGQPLGRNQ
TPGSMDQMGKMRSQPYGSGGPYSQQPHQGTPSGPQQGPAYPGQGYGPPGPQRYPMGMQGR
MQYGQQMPSYGQQGPGGYMQQGQQSYYGQHGPGPHPGQQQSPYPQPSPGQAGGQGPYSQQ
PHATQSSGPHGQTGTPYQQPHMSQQPQGQMTGPSPGPSQSPYSQSSAAAAAAAPQSSQSP
YSQQQVPQSQPSQQGSSQAPPASQTQPSYPPGQGPQQQQQPSASQQPPQTPTPASQTPAG
HAQMPQGQPTSYSQNPPQQQQQQQQPQQQQQQSPYQRFPPPPQEISQESFSSQSSAPPSG
PPLASKSSTEDMQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSP
FSPHTSPPVGSPASASASRSGPLSPTTMPGNQMPPRPSSGQSDGIIHPSMNQPGMGPDRG
YMQRNPQMAPYGSPQSSSALSPRQSSGGQVHPGMVPYQQNNSMANYGPQGGQYGPQGYPR
QPGYSGMPNANYQGPGIGGSMNPMSGQGGGPMFAGMPSARMPHGQMGARPYGPNMGPNMS
PNMGPNMGNMPPQVASGMCPPPGLNRKPQDAGAMQHGPTNSIHNRLPGYPNMSPGPGMMG
SGYGPSMNNMPGMMNTQGSPYPMGANMTNNTSGMSPGPDFGMDGKLNQAQKMNNKVEGTP
KTESKSKKSSSSTTTSEKITRLYELGPEPERKMWVDRYLAFIEEKAMGMTNLPAVGRKPL
DLFRLYMSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIER
GEDPPPDIMSGDNKKNQPKIQPPSPAGSGSLQGPQTPQSTSSSMAESGDLKPPTPASTPH
SQMPPIPSGRSSVNLQDPFADSDFSRRNTMTPNSGYQSGMSTPEMPGRMGPYEPNKDHFS
GMRKVGEQFMPSGQGQNSSLGDQYNRGPPGPMGNMPMGQRHQYPYGTNYERRPESGMGPD
GSIGPGVPQPNMMPSNAESGMYSPNRYPPQQQRHDSYSSQYPGQSAPPAGSYPNQQPGMF
PQQQSNYKRPGDGSYPPAKRHHDGEMFGGPYNAQQPQPPTQAPPSGPTSAQQEMYNQYNS
SYPGSERRPPGAQNQFPFPFGRDRMQPGTGPNSQGSMPPQMMGSQMQSAPDGPQGGMWQG
RGDMGYSNYPNRQGPPAGPGQGPGYHTMNRSEDMMSSEPRMNHDGQWPGPRQPPFGPGGA
GPPISRPLQSNYQSPQTMQNHIPQVSSPTPMPRPMESRTSPSKSPYMPSNIKMQKAGPPV
PASHIVPPSVQPPMMRRDLSFPPGSIEATPPVLKSRRRLTMKEIGTPEAWRVMMSLKSGL
LAESTWALDTINILLYDDNSISNFNLMQLPGFLELIVEYFRRCLIEIFGILREYEVGDPG
QRALLDPNVLKEENTVEDEAFMEGMEEDGETEEEDEGEEVQRSKHQEQHAAQVPLQIKQE
EKPMTLEESVKKEDSQGIEGESSAETKASEPPCLELAVTQEKPKQASKFDKLPLKIVRKK
DPFVVDCSNKLGRLQEFDSGLLHWSIGGGDTTEHIQTHFESKIELLRQRTRLPAQGSDRK
KGAQKESQAPSLPLSSEEHRKEVDRQPSPESSTEKVPDEISDPRDNRPADCLDAASEGTS
HIEKDQEKQELELTTPESIRPAAPSPLLQGRRSVLEDEPHSKDEAPLVTLSEWQDSLARR
CICVSNIVRSLSFVPGNDTEMSKHPGLLLLLGRLLLLHHRHPERKQAPLTYEKEEEVDES
LGSKKDEWWWDCLELLRENCLVTLSNISGQLDFSVYTESICLPLLDGLLHWAVCPSAEAQ
DPFPSLGLNGALSPQRLVLETLCKLSVQDNNVDLILATAPFSRLEKLFGNLVRLVGERKV
PVCREMAVVLLANLAQGDSMAARAIAVQKASVGNLLGFLEDSLAATQFQQSQGSLLHMQG
SHFEPTSVDMMRRAARALLALAKVEENHSEFTLYESRLLDLSVSPLMNSMVSHVICDVLF
LIGQS
NT seq
6858 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgctacctctctcaacaccagcccgccttccgagctgaaa
aaaccggatcgagacccaaaggaggagtcggtaccgggggagaagcagcaggaaaataag
gagccgggactagagagcggatctccggctcgcggggaactgcaggaccgggccgatgtg
ggaaatgctgggggaggaggggagtcggagatgaagaacggcaacgggaatccgtcgagg
gtgaacaataatcaaaatgatagcaccggagcggaggggaacaaccatcctggaatggta
caccatcacgcgcccgggtatcagccagcttcctatagctacgcgcagcactacggccgg
gccccttttcatcaacatggcggacaacaaagccctggcatggcagctgcagcggggcca
ggcgcgctgtcgggcagtatgatggacccctatcagcccaactcccatgaccacagcttt
ccgaaccaccagtacaacagctacagtccgttcgggaaccgaagcccttacccgggccag
ggctacggcatgagctctccgcgcagcgctcctcaggctcaggcggtaggggggcagtca
gccaagcaacagcagccagcagcggctgcatcttacagcaatcagcgatataacatggga
aacccgcagccgacatccaccccgaccctcaaccagcttctcacctccccgagcggtgcc
aggagttaccccaattacccgccgagtgactacaacagccaggacggtgctaagggacca
gcagatatggccagcagcggcgggcagtatggtgggggccatccgggttggcaacaaagg
agccatcacccgccacccatgagtccgggaagtactgggcagcccctgggtagaaaccag
actccaggctccatggatcagatggggaaaatgcgcagtcagccgtacgggtcaggtggt
ccttactcccagcagcctcatcaagggactccttcagggccccaacagggacctgcttac
ccaggccagggttatgggccccctggccctcagagataccctatgggcatgcaaggacgg
atgcagtacggccagcagatgccatcatatggacagcagggaccagggggttacatgcag
caggggcagcagtcctattacggccagcatggtccgggtcctcacccgggccagcagcag
tcgccataccctcagccttcccctgggcaagcaggaggacagggaccttactcgcagcaa
cctcatgcaacccagtcatcagggccgcacggacagacaggcactccttaccaacaaccc
cacatgtcccagcagcctcaggggcagatgactggtccctcgccgggcccttcccagtcc
ccatactcgcagtcgtcggcagcagcagcagcagcagcaccccagtctagccagtctcct
tattcacaacaacaggtgcctcagtcccagccctcacagcaggggagctctcaggctcct
cctgcttcccaaacgcagcccagttacccgcccggccaggggccacaacagcagcaacag
ccatcggcctcccagcagccaccgcagacgcccacacctgcttctcaaacgcctgcggga
cacgcacagatgccacagggacagcccacgtcctactcccagaatcccccacaacaacaa
caacaacaacaacaaccacagcagcagcagcagcaatcgccgtatcagcgctttcctcct
cctcctcaggagatttcccaggagtcttttagctcccagtccagtgctcccccctccggt
ccgcctctggcatccaaaagcagcacagaggacatgcagggcagaccctccagtctacca
gatctatccggttctatcgatgatctacctactggtacagagggcgctttgagccctgga
gtcagcacatctggagtatccagcagtcagggggaacagagcaatccagcacagtcgccc
ttctccccccacacctctccccctgtgggctcacctgccagcgcctctgcttctcgttcc
gggccattgtcccctaccacaatgccaggaaaccagatgcctccccgtccttcaagtgga
cagtctgatgggatcatccacccttcgatgaatcaacctggcatgggcccagacagagga
tacatgcagagaaaccctcagatggcaccctatgggtctccacaatctagctctgctctt
tctcctcgtcagtcatctggaggtcaagtgcatcctggaatggtcccttatcagcagaac
aactctatggcaaactacgggcctcaaggcggtcaatatggtccacaaggttatcccagg
cagccaggttacagtggcatgcctaatgctaattaccaaggccctggcattggcggatcc
atgaaccccatgtctggacaaggaggaggaccgatgtttgcaggcatgccttctgcacgg
atgcctcatggccagatgggtgcacgaccctatggtcccaacatgggtcctaacatgagt
cccaatatgggtcctaatatgggaaacatgccccctcaagtggcaagtgggatgtgtcca
cccccaggtctgaacagaaagccacaggatgctggagcaatgcagcacggtccaaccaac
tcgatacacaacaggctaccaggttaccccaatatgtctcctggtcctggtatgatgggt
tccggatatggcccctctatgaacaacatgcctgggatgatgaacacgcagggttctccc
taccctatgggtgctaacatgactaacaacactagcggcatgtctcctggtccagatttt
ggtatggatgggaaacttaaccaagcccagaaaatgaataacaaagttgaggggacaccg
aagacagaatcaaaatccaagaagtcaagttcctccacaacaaccagtgagaagatcact
cgcttgtacgagcttggcccagagccggaaagaaagatgtgggtagatcgttacttggct
ttcatagaggaaaaagccatgggcatgactaacctgccagctgtgggacgtaaacccctt
gatctcttccgcctctacatgtctgtcaaggagattggaggtcttacacaggttaataag
aacaaaaaatggagagagctagccaccaatctgaatgtggggacctccagcagtgctgcc
agctccctgaaaaagcagtacatccaatgtctgtatgcttttgaatgtaagattgagcgt
ggagaagacccaccaccagacattatgtctggagataacaaaaagaaccagccgaaaatt
cagcctccctccccagctggatctggctctcttcagggcccccagacgccacaatccacc
agcagttctatggcggaaagtggagacttgaagccccctactccggcctctacgccacac
agccagatgcccccaattccaagtggcaggagcagtgtgaacttacaagatccatttgct
gatagcgacttctctcggagaaacactatgacacccaactctggctaccagtcaggcatg
agtactccggagatgcctggtcgcatgggaccctatgaacctaataaagaccactttagt
ggtatgcgtaaagttggagaacagttcatgcctagtggacagggtcaaaacagcagtctt
ggtgatcagtataacagaggaccaccaggcccaatgggaaacatgcctatggggcagcgg
caccagtatccatatggcaccaactatgagagaagaccagaatcagggatgggcccagat
ggcagcatagggcctggagtgccacagccaaatatgatgccttccaatgctgaatctggg
atgtactcaccaaaccgttaccctccacagcaacagcggcatgattcctatagtagtcag
tatccaggacagagtgcaccacctgctggctcctatccgaatcagcagcctggaatgttc
ccgcaacaacaatcgaactacaaaaggccaggtgatggcagctatcctccagctaaacgg
catcatgatggggagatgtttggtgggccatacaatgctcagcagccacagccaccaacg
caggctccccctagtggacccacaagtgctcagcaggaaatgtataatcagtataacagt
tcttaccctggttcagagcgtcgccctccaggtgctcagaatcagtttcctttccctttt
ggaagagatcggatgcaaccagggactggcccaaactcccagggttctatgcctcctcaa
atgatgggcagtcaaatgcagtctgctcctgatggtcctcaaggtggtatgtggcagggc
cgaggtgatatgggctactccaattaccccaatcgtcaggggcctcctgctggtcctggc
cagggccctggttaccatacaatgaacagatctgaagacatgatgtcatctgaaccacgt
atgaatcatgatgggcagtggcctgggccacgtcaacccccctttgggcctggtggggca
ggcccaccaattagcagacccttgcaatctaactaccagtctccccaaaccatgcaaaac
cacattccacaggtgtcaagccccacacccatgcctcgccccatggaaagcaggacttct
cccagcaagtcaccttacatgcccagcaatatcaaaatgcagaaggcggggcctccagtc
cctgcatctcacatagtacctccctcagtgcagcctccaatgatgagaagagacctatcc
ttccccccaggttctatagaggcaacaccaccagttctcaaatctcgcaggcgtcttacc
atgaaagaaattggcactccagaagcatggagagttatgatgtctcttaaatctggactg
ttggcggagagtacatgggctttagacaccatcaatatcttattatatgatgacaacagt
atttcaaatttcaacctcatgcagctccctggtttcctggaactgattgttgagtatttc
cgccgttgcctcattgaaatctttggcattctgagggaatatgaagttggagatccagga
caaagagctctgttggatcccaatgtccttaaagaagaaaacactgtggaggatgaggca
tttatggagggcatggaggaagatggagaaactgaagaggaagatgaaggggaagaagtg
cagaggtcaaaacatcaagaacaacatgcagcacaagtacctctccaaataaaacaggaa
gaaaagccaatgactcttgaagaatctgtgaagaaagaagacagccaaggcattgaagga
gagtcatctgcagaaaccaaggcttcagagccaccgtgtcttgagttggctgtgactcaa
gagaagcccaaacaggctagcaagtttgataagcttcccttgaagatagtgcgaaagaag
gacccgtttgtagtagactgctcaaataagcttggccggttgcaggaatttgacagtgga
ctcctgcactggagtattggtggaggtgatacaacagaacacatccagacccactttgaa
agcaagatagagctgttacgccaacgaactcgtttacctgctcagggctcagacaggaag
aaaggagctcagaaggaaagccaggccccttcattgcctttatctagtgaagagcatcgg
aaagaagtggaccggcagccttctcctgagtcatccactgagaaagtgcccgacgaaatt
tccgatccgagggacaacagacctgctgactgcttagatgctgcttctgagggcacttca
cacatagagaaagatcaagagaaacaagaattggagttgacaactccagaaagcatcagg
ccagcagctccaagcccattattacagggtcgacgctccgttttagaagatgagccacac
agcaaggatgaagctcctcttgttacactctcagagtggcaggattctctcgcccgtcgc
tgcatctgtgtctccaacatcgtccgcagcctctcgtttgtcccgggcaatgacacagag
atgtctaagcatccagggctgttgctactgctgggccgcctgttacttctccatcatcgg
catccagagcgaaagcaggcgcccctaacctatgagaaagaagaggaggtggatgagagt
cttggtagcaagaaagatgagtggtggtgggactgtctggagcttttgcgggaaaattgc
ttggtcacactttccaacatctcaggccagcttgacttctctgtctacactgagagcatc
tgcctgcccttgctggatggattgctccattgggccgtttgtccttcagcagaagctcaa
gaccccttccccagtctcgggcttaacggagccttgtccccccagagacttgtcctggag
accctctgtaagctcagtgttcaggacaacaatgtggacctcattcttgcgacggcacct
tttagtagattagagaagctttttgggaaccttgttcgtctagttggagagcgaaaggtg
cctgtttgccgggagatggcggtggtgctgctggctaatcttgcacagggtgatagcatg
gcagcccgtgccattgcggtacagaaggccagtgtagggaatctgttgggcttcttggag
gacagcttagcggctacacagttccagcagagccaaggttccttacttcacatgcagggg
tcacactttgagccaactagtgtggacatgatgcggcgagctgctcgggcactgctcgcc
ctcgctaaggtggaggagaaccactctgagtttacgctctatgaatcacggctactggac
ctttctgtctcccccctcatgaactcaatggtgtcccatgtcatctgtgatgtactcttt
ttgataggccagtcatga
DBGET
integrated database retrieval system
