Danio rerio (zebrafish): 100141490
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Entry
100141490 CDS
T01004
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a precursor
KO
K06757
neurofascin
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100141490 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
dre04515
]
100141490 (nfasca)
Cell adhesion molecules [BR:
dre04515
]
Immunoglobulin superfamily
L1 family
100141490 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Bravo_FIGEY
V-set
V-set_CD47
C2-set_2
Ig_DSCAM-DSCAML_C
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
100141490
NCBI-ProteinID:
NP_001139239
ZFIN:
ZDB-GENE-080229-6
Ensembl:
ENSDARG00000061099
UniProt:
C0L978
LinkDB
All DBs
Position
11:25723871..25895605
Genome browser
AA seq
1369 aa
AA seq
DB search
MWTQRRWAALAVLSIISLLSEEAAAIEVPLDPKIQQELKQPPTIVKQSLKDYIVDPRDNI
IIECEAKGNPVPTFQWRRNGKFFNVGKDPRVTMRSRSGTLEIRSSGKPEDYEGEYQCFAS
NNLGTAISNKILLRVSKSPLWPKEVLEPVTVREGSPLVLACNPPPGLPPPETFWMDSFIM
PIAQDRRVSMGLNGDLFFSNVLAKDAKTDYSCNARFEFTHTIQQKNPYTLKVQTMRNIPE
TQPTSLSPTGLPSTKMVLRGGELLLECIAAGVPTPTITWSKRGGDLPTKKVRIGNFDKTL
RILNVSEEDIGSYTCMASNRIGSIRHTVEVQVKAAPFWLEKPINLVLAPDESGRLVCRAN
GSPKPTIQWLVNGEPIESSLPNPNRRVLDDTIIFETVQFESSAVYQCNASNEHGYLLANA
FVSVLDMAPRMLGPKNQLIKVIENNRTFLECPFFGSPLPLLRWFKNGLGSGLDGGHYRLY
HNGTLEIKQARTEDQGTYTCVASSILGKMENQVRLEVKEPTRIVRAPEHKTEPRGTTVRF
DCRVKHDPSLPATVTWLKDEKPLSFSWIGRLKKDDESLTIYNVNPDDGGTYTCTAKTEID
EDTASARLTVTENDSSSASNRSASAGRPDPPQDLELSDPSARSVRLTWVPGNENNSPVTH
FLVQFEEDRWEPGKWQNLSIYDWNLNSVNLQLSPFVNYQFRVIAINAVGQSQPSHPSARY
QTSGAPPDVVPSGLKGWGSKKNNMEITWQAMQNTERNGPNLRYVLSWRRKDTEEEWNNIT
TAKTKHVVHNTDTYVPYEIKIQAVNDFGHGPESNMVIGYSGEDKPSAAPTDLRVSKINST
KVNIHWEPVEQSSVNGEFKEYKLYYWREASLIKGLKVNRTKLHKGFFTTAENPSGILTEL
YPYSKYKMYMVVANREHEGPQSNTVEFYTKEGEPGAPKYFRILRHTDVVHLKWDKPLEPN
GVLIGYTLQYHTVNGTQTGERKVQSFPPNVTEYVMNLPHRFTRFKFFLAARTQVGAGEVY
AVESPHFTNEGTPDTDSTVVAVNFTDGLMFEIPPPPLPPSTDPYPTIFTLEPTPPVPTTA
APTKPTTTTTTTTTTTTTSTTTTTTTTTTTTTTTTAASTTVAPVRPVPPKTVDWKMLAPN
VKIWNLTVDANNDNANVSWKHNFSVDSSKFVVEFTLDSNGSMTSIQVNQQPHIKLAGLVA
GAKYRLRVYSHEHNSISSDYVTFETGRAYKEQEDIATQGWFIGLMCAVALLVLILLIVCF
IKRSRGGKYPVREKKDLPLDPVDHKDQDGSFDYHSDEDNKPLQGSQTSLDGNVKESDDSL
VDYGEGGDGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgtggacacagaggcggtgggcggcactcgcagtgttgtcaataatctcactgctgtca
gaggaggcggctgctattgaagtccctctggacccaaagatccagcaagagctgaaacag
ccccccaccattgtgaagcagtcactaaaggactacattgtggaccccagagataacatc
atcattgaatgcgaggccaaggggaacccagtgccaacgtttcagtggaggcggaatgga
aagttctttaatgtgggtaaggacccacgggtgaccatgagaagtcgatctggaacacta
gagatcagaagcagtggaaaaccagaagattatgaaggagaataccagtgcttcgcttcc
aacaacttgggcacagccatttccaacaaaatcctgcttcgagtgtcaaagtctccgctg
tggccaaaggaggttttggaaccggtaactgtgcgtgagggatcaccgctcgtcctggcc
tgcaaccctcctcctggtcttccccctcctgaaaccttctggatggacagcttcattatg
cctatagcacaggacaggagggtgtcaatgggcctgaacggtgacttgttcttctccaac
gttctagctaaagatgccaagactgactacagctgcaatgctcgcttcgagttcacacac
accatacagcagaagaacccctacacacttaaagtgcaaacaatgcgtaatataccggaa
acccagcccacctttctatctccaacgggcttgtccagcaccaagatggtgctcagagga
gaagaacttctcctggagtgtatagcagctggagtaccaactcctaccattacctggtcc
aaaagaggaggagacctgccaacgaaaaaagtcaggattgggaacttcgagaaaacctta
cgcattctcaatgtgtctgaggaagacattggcagctacacctgcatggccagcaacaga
attggcagcattcgccacacagttgaagtccaggtcaaagctgctccattttggctagaa
aagcccatcaatctggttcttgcccctgatgagagtggacggttagtgtgccgtgctaac
gggagtcccaaacccactattcaatggctggtgaatggagaacccattgaaagttcactc
cccaaccccaatcggagagttcttgatgacacgatcatatttgagacggttcagtttgaa
agcagtgcagtttaccagtgtaacgcctccaatgagcacggttatcttctggcaaatgct
ttcgtcagtgttttggatatggcaccgcggatgcttggcccgaaaaaccagctgatcaaa
gtcattgaaaacaacaggaccttcctcgagtgtcctttctttggctcaccgctcccttta
cttcgctggtttaagaatggacttggcagtggtttggatggtggtcactacaggctatac
cacaatggcactttggagatcaagcaggcccggacagaagaccagggcacctacacctgc
gtcgccagcaacattctgggcaagatggagaatcaagtgcgcctagaggttaaagagccc
acaagaatagtccgcgcacctgaacataagacagaacccagaggaaccacagttcgattc
gactgtcgagttaaacatgatccttcccttcctgctacagtcacatggctgaaagatgaa
aagcctctgagcttcagctggattggccggttgaaaaaggatgatgagtccttgactatt
tacaatgtcaatccagacgatggaggaacctacacatgcacagccaaaactgagatagac
gaggacactgcctcagctcgccttactgttacagagaatgacagctcgtctgcttcaaat
cgtagtgcctctgcaggtcgacccgacccacctcaggatctggaactctcggacccttca
gcacgcagtgtcagactcacctgggtgcccggaaatgaaaacaacagtcctgttacacat
tttctagtccagtttgaagaggacaggtgggagccagggaagtggcagaacctgtcaatt
tatgattggaacctaaactcagttaaccttcagctatcaccattcgtcaactaccagttc
agagtaattgcgatcaatgctgtgggtcagagtcaacccagccacccctctgcacgttat
cagaccagcggagcccctcctgatgttgtaccaagtggacttaaagggtggggaagcaaa
aaaaacaacatggagatcacatggcaggccatgcagaacacagagaggaatgggccaaac
ctgcgatatgtgctctcctggagaagaaaagacacagaagaagagtggaataacatcacc
acagccaaaacaaaacacgttgtccataatacagacacctacgttccttatgagatcaaa
atacaggctgtcaatgactttggacatggcccagagtcaaacatggtcatcggttattct
ggggaagacaaaccatccgctgcaccaacagatcttagggtgtcaaagatcaacagtacc
aaagtcaatattcactgggagcctgtggagcagagcagtgtaaatggagaatttaaagaa
tacaagttgtattactggcgggaggccagcctcataaagggcctgaaagtaaataagaca
aagttgcaaaagggattctttaccacagcagaacatccctctggcatcctgactgagctc
tatccatacagcaaatataagatgtatatggtggttgctaaccgagaacatgaagggccg
caaagcaatactgtggagttttacaccaaggagggagagccaggggctccaaaatacttt
aggattctaaggcacacggacgtggttcacctgaagtgggacaaaccactggagccaaac
ggtgtcctgattggatacacactccagtaccacacagtgaacgggacacaggcgggagag
aggaaagtccagagtttcccacccaatgtgacggagtacgtcatgaatctgcctcaccgc
ttcacgcgcttcaagttcttcctagcagcccgtacgcaggtcggagcaggagaagtgtac
gctgtcgagtctccacacttcacaaatgaaggcaccccagatactgactctacagttgta
gccgttaactttacagatggcttgatgttcgaaattcctcctcctccccttcccccctcc
actgacccaaacccaacaatattcaccccagaaccaactccaccagtccctacaactgct
gctccaaccaaacctactaccaccaccaccaccaccactactactactacaacttctact
actactacaactaccacaactactacaacaaccaccactactacagcagcttccaccaca
gttgctccagttcggcccgtgcctcccaaaacagtggattggaaaatgctggccccgaat
gtaaagatctggaatctgacggtggatgctaacaatgacaatgctaacgtcagctggaag
cacaacttctccgttgacagcagcaagtttgttgtagagttcacactggacagtaatggg
tcgatgacgagcattcaagtaaaccagcagcctcacattaagctggctgggctggtggct
ggggccaagtatcggttgcgggtctattcgcatgagcacaactccatcagcagcgactat
gtcacgttcgagacaggcagagcctataaggagcaggaagacatcgctactcagggctgg
ttcattgggttgatgtgtgccgtcgctttattggttctgattctgctcattgtttgtttc
atcaagaggagtcgtggaggaaaatacccagtgagagagaagaaagacctccccttagat
cccgtcgatcataaagaccaagatggatcatttgactatcacagcgacgaagacaacaag
ccgttacagggcagccaaacgtccctggacgggaacgttaaagaaagcgacgacagtctc
gtggactacggcgaaggaggagatggacaattcaacgaggatggttccttcatcggccaa
tacacagtaaagaaggacaaagaggagacagaaggaaatgagagctcagaagccacatca
cctgtcaatgccatctactctttggcatag
DBGET
integrated database retrieval system
