Danio rerio (zebrafish): 100145909
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Entry
100145909 CDS
T01004
Symbol
srsf3b
Name
(RefSeq) serine/arginine-rich splicing factor 3b
KO
K12892
serine/arginine-rich splicing factor 3
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03040
Spliceosome
dre05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100145909 (srsf3b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100145909 (srsf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dre03041
]
100145909 (srsf3b)
Spliceosome [BR:
dre03041
]
Common components
Common spliceosomal components
SR proteins
100145909 (srsf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
100145909
NCBI-ProteinID:
NP_001296401
ZFIN:
ZDB-GENE-071005-2
Ensembl:
ENSDARG00000059360
UniProt:
A5WWG4
LinkDB
All DBs
Position
22:complement(613265..623518)
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AA seq
164 aa
AA seq
DB search
MHRDCPLDCKVYVGNLGNNGNKSELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDATD
AVRELDGRTLCGCRVRVELSNGEKRTRSRGPPPSWNRRPRDDYRRRSSPPQRRRSPRRRS
FSRSRSRSFSRERRRERSLSRERNHKPSRSFSRSRSRSRSNDRK
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgcgactgccccctggactgcaaggtttacgttgggaatctggggaataatggg
aataagtctgagctggagagggcgtttggctactacggacctctgaggagcgtctgggtg
gccagaaaccctcctggttttgcgtttgttgagtttgaagaccctcgtgatgccacagac
gccgtcagagagctggacgggcggaccctctgtggttgccgagtgagggttgaattgtcc
aatggcgagaagcggactcgtagccggggtccacctccttcttggaaccgccgcccacgg
gatgactaccgccgccgcagcagcccgccccagaggcgcagatctcccaggaggaggagc
ttcagtcgtagtcgcagcagatctttctccagagaacgcagaagggagcgatctctgtcc
cgcgagaggaaccacaaaccatcacgatctttctcccggtcgaggagtcgttccagatct
aatgaccggaaatga
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