Danio rerio (zebrafish): 100147913
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Entry
100147913 CDS
T01004
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100147913 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dre03019
]
100147913 (bard1)
04121 Ubiquitin system [BR:
dre04121
]
100147913 (bard1)
03036 Chromosome and associated proteins [BR:
dre03036
]
100147913 (bard1)
03400 DNA repair and recombination proteins [BR:
dre03400
]
100147913 (bard1)
Messenger RNA biogenesis [BR:
dre03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100147913 (bard1)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
100147913 (bard1)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100147913 (bard1)
DNA repair and recombination proteins [BR:
dre03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100147913 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
BRCT
BRCT_2
Ank_KRIT1
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
100147913
NCBI-ProteinID:
XP_021334679
ZFIN:
ZDB-GENE-030131-5883
Ensembl:
ENSDARG00000076733
UniProt:
A0A8M9QKB4
LinkDB
All DBs
Position
9:complement(40633114..40683735)
Genome browser
AA seq
653 aa
AA seq
DB search
MFVPNNKKNMRIWFSPKSRKVRCCIHRPVELNTPNGVQQKKSTASPSSEDLAVFNFSSSS
QESGPSTPPRAKMNKKTKKKRIGQNSRQAKAAQRPRTWIRSLQERKKLKLEVINKQWNTG
EEADVDAIDETGDEDEKMSSGDDNRKPAKRVFFRLPHSQSEETFKPSQQRNLTPNHEKIV
EFKDSEQQNSAALSLPDHDQQPIAEISPELNENELLQPSFSRVRKRSSSESLPKQPRITP
EPKRRSSGEGAALIEDSSQSLKTFRPTNEKPVLSSLGTHDVLKKSPDVRHKQTCPVYMKR
NHKGETALHLAASKGDVEGVRKLLAQGADPNLKDNAGWTPLHEACNVGHLGVVEELLQQG
ALLNTPGYQNDSPLHDAIRSGHIAVVKLLVERGASQSVLNIFGLRPVDYALTPEMKEVLR
VAPEASHLITTSLRPPASKAAGGVVLIGSELTQTQHKQINRAAQLLGGKQAKAFSSAVTH
VVVPDVPIMPSTLTTLHGVLNGCWILNFSWLSCSLQAGSWVKESGYEAGDGPLRARANRG
SLLPPLFDGCFFYMLGSFRKPPKDELLQLVKAGGGQLLKRLPKPDSDVTQTLNAAAYHAQ
AGSDQVLCTQYILYDPQSSYKPQKVRLGKVWSAPSTWLLDCIAAFRLLPVPEP
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccctaataacaagaagaacatgaggatctggtttagtccaaagagtcgcaaa
gtccgctgctgcatccacagacctgttgagttaaacacacccaatggagtccaacaaaag
aaaagcactgcgtcaccttcttccgaggatctcgcggtcttcaacttcagctcctcctct
caggagtcaggaccctccactcctccacgggccaagatgaacaagaaaaccaagaaaaaa
aggatcggccaaaacagcaggcaagctaaagccgctcaaaggcccagaacatggattcgt
tcattgcaggaacgtaagaagctcaagctagaagtgatcaataagcagtggaacactgga
gaagaagctgatgtagacgctatagacgaaaccggtgatgaggatgagaaaatgagctct
ggggatgacaacaggaagcctgctaaaagagttttcttccgcctccctcacagtcagtct
gaagaaacttttaaaccttctcaacaaagaaatctcactcctaatcatgaaaaaatcgtg
gaatttaaagactcagagcagcaaaactctgcagctttgagtttaccagatcatgaccaa
cagccaattgctgaaatttcaccagaactgaatgaaaatgagcttcttcagccttctttt
tctagagtacgtaagagatccagttcagagagtttaccgaaacaacccagaattactcca
gaaccaaagaggagatcatctggagaaggagctgctttaattgaagactcctctcagagt
ctgaaaactttcagaccgaccaatgagaagccagtgctgtcatctttagggactcatgat
gttttgaagaaatctccagatgtgagacacaaacagacctgtcccgtttacatgaagagg
aaccataaaggagaaacagcactgcacttagctgcttcaaagggtgatgtggagggggtc
cgtaagctccttgctcagggagccgaccccaacctgaaggacaatgcaggctggacaccg
ctgcacgaggcctgcaatgtgggtcacctaggagtggtggaggagctccttcagcagggg
gcgctgttgaacacacccggctatcagaacgactctccgctacatgacgccatcaggagt
ggtcacatagcagtagtcaaactcttggtggaacgaggtgcatctcaaagtgttcttaat
atctttggcctgcggccggtggattatgcgctgactccagaaatgaaagaggtcctaaga
gtggccccagaggcatcacatctcataacaacatccttaaggccccctgcaagtaaggct
gcgggcggtgtggttctgattggcagtgaactgacgcagactcagcacaagcagatcaac
agagcagctcaactccttggaggaaagcaggcaaaggccttttccagtgcagtcacccat
gtggttgtaccagatgtacccatcatgccctctacactgaccacactgcatggagtcctc
aatggctgctggatcctcaacttcagctggctgagctgtagcctgcaggcaggcagctgg
gtcaaggaaagcgggtatgaggcaggtgatggacccctgcgtgcccgcgccaacagaggc
agcctgctgcctccgctcttcgacggctgcttcttctacatgctgggctccttccgcaaa
ccaccaaaagatgaactcctccagttagtgaaagcaggaggaggtcagcttctgaaacgc
ctgcccaaacctgacagcgacgtcacacaaaccctgaacgcagcagcctaccacgctcag
gctggatcagaccaggttttgtgcacccagtacatcctatacgatcctcagagctcctac
aagccccagaaggtcaggttaggtaaggtttggtcagccccatccacgtggcttctggac
tgcatagctgcctttcgactcctacccgtgccggagccctaa
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