KEGG   Danio rerio (zebrafish): 100147988
Entry
100147988         CDS       T01004                                 
Symbol
chmp6a
Name
(RefSeq) charged multivesicular body protein 6-like isoform X1
  KO
K12195  charged multivesicular body protein 6
Organism
dre  Danio rerio (zebrafish)
Pathway
dre03250  Viral life cycle - HIV-1
dre04144  Endocytosis
dre04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:dre00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100147988 (chmp6a)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100147988 (chmp6a)
  09143 Cell growth and death
   04217 Necroptosis
    100147988 (chmp6a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    100147988 (chmp6a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dre04147]
    100147988 (chmp6a)
Membrane trafficking [BR:dre04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    100147988 (chmp6a)
Exosome [BR:dre04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100147988 (chmp6a)
  Exosomal proteins of other body fluids (saliva and urine)
   100147988 (chmp6a)
SSDB
Motif
Pfam: Snf7 DNA_alkylation
Other DBs
NCBI-GeneID: 100147988
NCBI-ProteinID: XP_001922343
ZFIN: ZDB-GENE-100812-5
Ensembl: ENSDARG00000097451
UniProt: A0A0R4IS77
LinkDB
Position
3:51659939..51680800
AA seq 199 aa
MGNVFGRQGRPSRVTDQDRAILQLKQQRDKLKQYRKKITLQLERERRLAKQLLKDGKRER
ALLLLKKKRYQDQLLDKTDIQIDNLERLVQDIEFAQIEIKVIESLKDGNDCLKQMHEVMS
LEEVEKILEDTKEAIEYQKQIDDLLAGCLKEEDEDAVLAELETLTQGEDTALSELPTDPQ
PAAPEGGTEIKTEREMLVA
NT seq 600 nt   +upstreamnt  +downstreamnt
atgggaaatgttttcggcagacagggacgcccgagtcgagtgacagatcaggacagggcg
atattgcaactcaagcagcagagagataaactgaaacaatatcggaagaaaatcacatta
cagttggagcgagagagacgtctggccaaacagctcctgaaggatggcaagagagaacga
gcgcttctgctgctcaagaagaaacgctaccaagaccagcttctggacaagactgacatc
cagatagacaacctggagcgcttggttcaagacatcgaatttgctcagattgaaataaag
gtcatcgaaagtttgaaggatggaaatgactgtcttaagcaaatgcatgaggtcatgtca
ctggaggaggtggagaaaatcctagaggacacaaaggaggccattgaatatcagaagcaa
atagatgatctcctggcgggctgtctgaaagaggaggatgaggacgctgtgctagcagag
ctggagaccctcacccagggtgaagacacagcactttcagaattacccactgatccacag
ccagcagcacctgagggagggacagaaatcaagacggagcgagagatgctggtagcgtaa

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