Danio rerio (zebrafish): 100147988
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Entry
100147988 CDS
T01004
Symbol
chmp6a
Name
(RefSeq) charged multivesicular body protein 6-like isoform X1
KO
K12195
charged multivesicular body protein 6
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03250
Viral life cycle - HIV-1
dre04144
Endocytosis
dre04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100147988 (chmp6a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100147988 (chmp6a)
09143 Cell growth and death
04217 Necroptosis
100147988 (chmp6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
100147988 (chmp6a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dre04147
]
100147988 (chmp6a)
Membrane trafficking [BR:
dre04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
100147988 (chmp6a)
Exosome [BR:
dre04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100147988 (chmp6a)
Exosomal proteins of other body fluids (saliva and urine)
100147988 (chmp6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
DNA_alkylation
Motif
Other DBs
NCBI-GeneID:
100147988
NCBI-ProteinID:
XP_001922343
ZFIN:
ZDB-GENE-100812-5
Ensembl:
ENSDARG00000097451
UniProt:
A0A0R4IS77
LinkDB
All DBs
Position
3:51659939..51680800
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AA seq
199 aa
AA seq
DB search
MGNVFGRQGRPSRVTDQDRAILQLKQQRDKLKQYRKKITLQLERERRLAKQLLKDGKRER
ALLLLKKKRYQDQLLDKTDIQIDNLERLVQDIEFAQIEIKVIESLKDGNDCLKQMHEVMS
LEEVEKILEDTKEAIEYQKQIDDLLAGCLKEEDEDAVLAELETLTQGEDTALSELPTDPQ
PAAPEGGTEIKTEREMLVA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatgttttcggcagacagggacgcccgagtcgagtgacagatcaggacagggcg
atattgcaactcaagcagcagagagataaactgaaacaatatcggaagaaaatcacatta
cagttggagcgagagagacgtctggccaaacagctcctgaaggatggcaagagagaacga
gcgcttctgctgctcaagaagaaacgctaccaagaccagcttctggacaagactgacatc
cagatagacaacctggagcgcttggttcaagacatcgaatttgctcagattgaaataaag
gtcatcgaaagtttgaaggatggaaatgactgtcttaagcaaatgcatgaggtcatgtca
ctggaggaggtggagaaaatcctagaggacacaaaggaggccattgaatatcagaagcaa
atagatgatctcctggcgggctgtctgaaagaggaggatgaggacgctgtgctagcagag
ctggagaccctcacccagggtgaagacacagcactttcagaattacccactgatccacag
ccagcagcacctgagggagggacagaaatcaagacggagcgagagatgctggtagcgtaa
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