KEGG   Danio rerio (zebrafish): 100148379
Entry
100148379         CDS       T01004                                 
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
  KO
K25207  zinc finger SWIM domain-containing protein 8
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dre04121]
    100148379 (zswim8)
Ubiquitin system [BR:dre04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Target recognizing subunit
     100148379 (zswim8)
SSDB
Motif
Pfam: ZSWIM4-8_C SWIM
Other DBs
NCBI-GeneID: 100148379
NCBI-ProteinID: NP_001139179
ZFIN: ZDB-GENE-050320-59
Ensembl: ENSDARG00000069397
UniProt: B8A5T6
LinkDB
Position
13:21824999..21885562
AA seq 1912 aa
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRVRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTHEQIIGWWYSVRTSASHSSASGHTGRSNGQTEVAAHACASMCDEMVVLWRLA
VLDPTMSPQRRLELAAQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVECCYFNWEVAY
PLPGITYCNADKKNVSFCWARAMQQQRGLKAINSSEAGEGARSGTSEGNSLEHKSRSNSH
LPQQEVAVRPKETIVSKRKVVSNVNSGSVLVCLGSRVPLSLPDGSKSMYKTTNSSPSAGT
KAKLTQSSKGSCGSSSGVSGKHPSAKRRTSSEDSSLEPDMAELNLDDGSSMALGAEACNT
FDFLPPPPEMLPSPSTLLQKPLKYSSNSKERAFETKRVPHAADAHACFSKESSIAAPVVA
AMEKEVEVEADLDENGGDEDVIDDAGPSDSLPSKAQRGHGEGDGAGASGAPGPQVAEAAA
GADAVGEDDYQAYYLSAASEEGAERGVADSNHEEEPDIFAGIKPLEQEGRMEVLFACAEA
LYAHGYSNEACRLAVDLARDLLANPPDLKVEQPQTKGKKSKVSTTKQTQVATNTLSKVAF
LLTVLSERLELHNLAFNTGMFSLELQRPPASTKALEVKLAYQESEVVALLKKIPLGIVEM
TSIRDRAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNRNNEMPGDEE
LGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDR
ESQTHKPQTLSSFYSSKPATSSQKSPSKHATHGASGATGGVSKHTPTATSTAVQGMTSGG
AAGQQGGLAGGVQSTASGESISDNRDQEGAQSTSCDQQSEAAPFKPEGTVPSRLALGGRG
AYGTRCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRRPIRGGWTATSWGRGQDSDS
ISSSSSDSLGSSSSSGSRRAGGGARAKSTDTSRYKGRRPECHAPHVPNQPSEAAAHFYFE
LAKTVLIKAGGNSSTSIFTQPSASGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRT
YSSHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRASRARDPNMVRAAAELAL
SCLPHAHALNPNEIQRALVQCKEQDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWL
YEQTVGGGSGSQREGSGRCGANGGAGRTPPEGGCGILDNTGALDSSGVSAVTTTVTAAAV
VPVISVGSTIYQSHALPGSAMAHTQGLHPYTTIQTHLPTVCTPQYLGHPLQHVPRPAVFP
VSGAAYPQGMHPAFIGAQYPFSVATGPHPPLAATAVTFPGVPVPSMTQIAVHPYHTAEAA
LPLTTTVAGGVHAGAAIQAIQGASLPGLSSQPPSLVSAPFPVEDEQHSQPISQQGLHYLH
SAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVNHVYQFCVGAAKG
VLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIHHRLIHLTPADYD
DFVNIIRSARGAFCLTPVGMMQFNDVLQNLKRGKQTKELWQRISLEMATFSP
NT seq 5739 nt   +upstreamnt  +downstreamnt
atggaactgatgttcgctgagtgggaagatggagagaggttctcctttgaagattcagac
cgttttgaggaggactccctgtgctcattcatatcagaggcggaaagtctctgccagaac
tggagaggatggaggaaacagtctgccggcccaaattcccccactgtgaagattaaagat
ggccaagtcatccccctggtggagctgtcggccaaacaggttgccttccatattccattc
gaggtggtggaaaaggtttatcctcccgttcctgaacagctgcaattgcgaatcgcctac
tggagcttcccagaaaatgaagaagacatcagattatattcctgtttggccaacggcagc
cctgatgagtttcagcgtggtgagcagctctatagggtgagggctgtgaaagaccctttg
caaataggtttccacctcagtgccacagtagtgtcgcctcaggccggccaatcaaaagga
gcctacaatgtggctgtaatgtttgaccgctgccgcatcacttcctgcagctgtacctgt
ggagcaggagccaaatggtgtgcccatgtcgtggccctctgcctcttcaggattcacaat
gcttctgccgtgtgtcttcgagcacctgtgtctgagtccctgtccagattacaacgggat
caactccagaagtttgcacaatacctcatcagtgaacttccacagcagatcttgccgact
gctcagcgtcttttggatgagcttctatcctcccagtctaccgctattaacaccgtgtgt
ggagccccagatcctactgctggcccttcagcctctgaccagagcacctggtatttagat
gagtccaccctcagtgacaacataaagaagaccctgcacaaattctgtggcccttcacct
gttgtgtttagtgatgtgaactccatgtacctgtcgtccactgagcctccggcagctgct
gaatgggcttgtctgctgaggcccctgcgaggcagagagccagagggcatctggaatctt
ttgtccatcgtcagagagatgtttaagaggcgagacagtaacgctgcacctctgttagaa
atcctcaccgaacagtgtctcacccacgaacagattattggctggtggtatagtgtaaga
acatcagcctctcacagcagtgccagcgggcacacaggtcgcagtaatgggcagacagaa
gtcgcagcacatgcatgtgccagtatgtgtgatgaaatggttgtcttgtggaggctggca
gtgctagacccaaccatgagtccccaaaggcgtttggaacttgctgcccaactaaagcag
tggcacctgaaggtgatcgagattgtgaaacgggggcagcaccgcaaatctctcgacaaa
ctcttccaaggcttcaaaccagctgtggagtgttgctacttcaactgggaagtggcgtac
cctttacctggcatcacatattgcaacgcagataagaaaaacgtttcattttgttgggcc
agggccatgcagcagcagcggggcttgaaagccataaacagcagcgaagcaggagaagga
gctcgcagtgggacatcagaaggcaattccttagagcacaaatcacggagcaactcccat
cttccccagcaggaggtggccgtgcgccccaaggagaccattgtgagcaagaggaaagtt
gtgtcgaatgtgaacagtgggagtgtgctggtttgtctgggcagcagagttcctctctca
cttcctgatggaagtaaaagcatgtataaaactactaactcttccccatcagctggtact
aaagccaagttaacacaaagcagcaagggctcatgtggaagttcgagtggcgtcagcggg
aagcatcccagtgctaagcggcgaaccagcagtgaagacagttctttagagcctgacatg
gcagaactgaatctggatgatggctccagcatggcacttggagcagaggcctgcaacacc
tttgattttcttcctcctcctcctgagatgttgccctcaccgagcacgctgctccaaaag
ccactaaagtacagcagtaattcaaaagagcgtgccttcgagacgaaacgtgtgccacat
gcagctgatgcccatgcctgcttttcaaaggagagctctattgcagccccggtagtggct
gctatggagaaagaggtggaagtggaggcagacctggatgagaatggaggagatgaggat
gttatagatgatgctgggccttctgattcgcttcccagtaaggctcagcgtggccacgga
gagggagatggagccggggcttcaggcgcccctgggccacaggtggctgaagctgcagca
ggtgcagatgctgtgggtgaagatgactatcaagcgtattacctcagtgctgcttcagaa
gagggagcggaaagaggtgttgcagacagcaatcatgaggaagagccagacatatttgct
gggattaaacctctggagcaagaaggcaggatggaggttctgtttgcctgtgcagaggct
ctctatgctcacggctacagtaatgaagcatgtcgactagctgtcgatcttgctcgagat
ctgctggctaaccctcctgatctgaaggtggagcagccacagacaaagggtaaaaagagt
aaggtgtcgaccactaaacagacacaggtggccaccaacaccctgtctaaagtagccttc
ctgctgacagtattgagtgagaggctggagctccataacctggccttcaacactggcatg
ttctccctggagctgcagaggccgccagcttctactaaagctctggaggtgaagcttgca
tatcaggagtcagaggtagtggctctgctgaagaagattcctctgggtattgtagaaatg
acttccataagggaccgagcagaacagctccgtgatggaaacttctgcgactatcggcct
gttcttcccctcatgctggcaagcttcatatttgatgtgctctgcacccctgtggtctct
cccacgggttctcggcctccaagccggaaccgaaacaatgaaatgcctggtgacgaggag
ctgggttttgaggcagctgtagcagcacttggtatgaagacaacagtcagcgaggcagaa
catcctctgttatgtgaaggcacaaggagagagaaaggagacctggctttagccctgatg
attacctataaagatgaccaaagcaagcttaaaaagattctggacaagctgcttgaccgt
gagagccagacccataagccgcagactctgagctcgttttactctagcaaaccggccacc
agcagccagaagagcccttccaagcacgccacccacggtgccagcggagccactggggga
gtgtcaaagcacacccctacagcaacatcaactgctgtgcagggcatgaccagcggggga
gctgcgggccagcagggaggtttagctggaggtgttcagagcacagcctcaggagagagt
atctctgacaacagagatcaagaaggtgcgcagtcgacctcctgtgatcagcagagtgaa
gctgcaccgttcaaacctgagggcactgtgcctagtcgtctggcactggggggccgtggg
gcatatggcacccgttgctgggggtcacctgtgcggcagaaaaagaaacacactggtatg
gcaagcatagacagcagtgctccagagaccacctcagacagctctcctactctcagccga
cgacctattcgaggaggttggaccgctacttcctgggggagaggtcaggacagcgacagc
attagcagctcttcctctgattcactaggctcttcatcatccagtggctcacgcagagct
ggaggaggagccagagcaaagagtactgacaccagcaggtataaaggccgtcggcccgaa
tgccatgctccacacgtaccaaaccagccgtctgaggcagctgcccatttttactttgag
ctggccaagactgtgctgattaaagctggtggaaacagctccacctctattttcactcag
ccctctgccagcggaggccaccaggggccacaccgcaacctacatctgtgtgcctttgag
atcggcctgtatgcccttggcctgcataattttgtgtctcctaattggctatcaagaacg
tattcctcacacgtatcctggattacaggccaggctatggagattgggagtgctgctctc
aacatcctggtggaatgctgggacgggcaccttactcctccagaggtagcatcattggca
gatcgtgcgtcgcgtgcacgtgatcctaacatggtgcgagctgcggcagagctggccttg
agctgcctgcctcatgctcatgccttgaaccccaatgagattcagagagccctggtgcag
tgcaaggagcaggacaatgtaatgctggagaaagcatgcatggccgttgaggaggctgca
aaaggaggtggtgtttatccagaggtcctattcgaggtggctcatcagtggtattggctt
tatgaacaaaccgttggcggtggttcgggatctcagcgagaaggttccggacgctgcggg
gccaatggtggagctgggagaacgccaccggaaggaggctgtggtattctggataatacc
ggagctttggattcatcaggtgtctctgctgtaactacaacagtgaccgcagccgcggta
gtacctgtcatttctgtcggctccaccatctaccaatctcatgcgctgccaggctccgcc
atggcgcacacgcaaggcctgcatccctacactaccatccaaacacatctgcccaccgtc
tgcaccccacagtacctaggccacccgcttcaacacgtcccccgtcctgctgtcttccct
gtgtctggggcggcctacccacaaggaatgcaccctgccttcattggtgctcagtacccg
ttctctgtggccactggcccacatcctcctttggcagctactgctgtcactttccctggt
gttccagtgccgtccatgactcagatcgcggttcacccataccacaccgcagaggcagcg
cttccactcaccactactgtggctggaggagtacacgccggtgccgccatccaggccatt
caaggggcttctcttccaggactctcgtctcagcctccctcactggtcagcgcacccttc
cctgtggaagacgagcagcacagccagccgatcagccagcagggcctgcactacctccac
tcggcctacagagtcgggatgctggctttggagatgttgggaagaagggcccacaacgat
cacccaaacaacttttcccgaagtcccccatacacagaagacgtcaaatggctgttgggc
ttggctgcacgtcttggtgtgaaccacgtctaccagttttgcgtgggggcagcgaaaggt
gttcttagtccgtttgtcctgcaggagatcattatggaggccctgcagaggttaaaccct
gctcatatccacgcacacctccgcactcctgccttccaccagctcgtgcagcgctgccag
caggcctacttacagtacatccaccacaggctgatccatctgacccccgcagactacgac
gactttgtgaacatcatcagaagtgcccgcggggcattttgtctgactccagttggcatg
atgcagttcaacgatgtgctgcagaacctaaagaggggcaaacagactaaagaactctgg
cagcggatctcactggaaatggccaccttttcaccctga

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