Danio rerio (zebrafish): 100149028 Help Entry 100149028         CDS       T01004                                  Symbol tnca Name (RefSeq) tenascin isoform X5   KO K06252   tenascin Organism dre  Danio rerio (zebrafish) Pathway dre04510   Focal adhesion dre04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:dre00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100149028 (tnca)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:dre00536]     100149028 (tnca) Glycosaminoglycan binding proteins [BR:dre00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100149028 (tnca) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 EGF_TEN EGF_Teneurin Fibrinogen_C EGF_2 EGF_Tenascin Ig_DSCAM-DSCAML_C Pur_ac_phosph_N Fn3_Dep-1_2nd NDNF EGF hEGF FN3_Tor_3rd REJ NDNF_C Motif Other DBs NCBI-GeneID:  100149028 NCBI-ProteinID:  XP_009299433 ZFIN:  ZDB-GENE-130530-849 Ensembl:  ENSDARG00000078362 UniProt:  A0A8M3AS32 LinkDB All DBs Position 5:complement(5707991..5872765) Genome browser AA seq 1715 aa AA seqDB search MSSRGLTLSCLLLITLMALNHAGLVKKLIRQRREALNVPGIHNVTLSNSSRPVIFNHVYN IKVPGSPLCSVDLDAPEGSDVELRDAPSEHSVDGSNQIVFTHRINIPKQACGCTDGLPDL KDLLSRLEMLEGEVSTLREQCGAESTCCSAQVTGAIGTKPFCSGHGNYSTETCGCVCAPG WKGLNCTIPDCPGDCSDQGRCVNGKCECFEGFTGDDCSTDACLIDCGDNGRCLNGKCVCS EGFSGEYCTESDCLNNCLGRGRCVDGECVCDEPWTGFDCSELICPNDCYDRGRCENGTCY CDRGFTGEDCGALACPNDCSGRGFCIDGRCVCDAGYTGEDCSSLTCPNNCNDRGRCSNGV CICEVGFHGEDCGRISCPSNCNNRGHCVDGRCECDVGFQGHDCSELSCPNNCNNRGRCVN GQCVCDEGFGSEDCGLKTCPSDCYGRGQCVDGECVCFANFAGEDCSELRCPNSCQNRGRC IAGQCVCDEGFTGEDCSQRKCPNDCLGRGRCVDGRCVCQDGFKGQDCSVPTCPGNCNDHG RCVNGKCVCDEGFFGDACSDRSCLNDCSDVGQCVDGRCICDEGYIGEDCSDVSPPEDLTV TDVSTQKVNLTWRNEMLVTEYLITYVPTAPGGLQMDFRVAGDRTSATVSELEPGIEYLIN VYAVLNNKRSIPVSARVATYLPQPEGLRFTSITDSTVEVVWEQLNFPFDGWELIFRNTKE ENGKIVNNLTPSQTTFEQQGLGPGQEYEVTLSVIKNNTRGPETSSTVVTRIDSPAQIEVA DVTDRSAVISWSKPLAPVDGFKVSYGPSTDPLIHRDVELSASETQYSLEDLKPDTQYRVA LSSQRGDVTSEPIIESFTTGLDAPSELRAVDQTDSSITLEWKNSRSSIDGYRIKYGPIAG GAHGEDMFPKKAGDTTWATITGLKPGTEYGIGVTAVQNERESEPATTNALTDLDPPRDLE VQSSTETSVDLVWKRPRAKISTYRLAYVSVEGRREEIELPASASTSTLSGLMPGMSYTVT LVAERGHRRSAPATVTASTEEQKPQIGSLSLSDVSWDSFNVSWIIEDGPAFDSFVIEVAN SAGPERQNLSVSGDARDLWMSGLSPGTSYMITLYGVHQGSILGSINVEAATEAEPEIEHL FVSDVTPESFRLSWTTEDDVFDRFVLKVRDSRKLSHPREFSMSGDERTKVLTQLLGGTEY EIELYGVTLERRSQPVTAVVKTGLGALRDLHFSDITDTSAVVYWTLPRAQPDSYRITLIP IQGGSPMIVQVDGSQSQVSLRNLIPGETYQVSVIAVKGLEESEPVSDTFTTALDTPRSLT VVNVTDSSALLFWQPAVATVDGYMITYSADTVPPISEQVSGNTVEFEMNSLAPATQYTVS VYAIRDREKSLPATADFTTDVDAPRDLVASNIQTDSAVLSWTPPRAAITGYTLTFQNSDA DVREVIVDPSVASHTLSNLRSTTKYTVILQAVSEDKRSRSISTEFTTVGMLYGHPRDCSE ALLNGETSSGPYTIYINGDEKQPLRVYCDMTTDGGGWMLFLRRQSGKLNFYRNWRNYSAG FGDTSDEFWLGLSNLHKITAAKQYEIRVDLRDGSETVFAVYDRFYIGDPRSRYKIQIGAY SGTAGDSLTYHQNRPFSTYDSDNDIAITNCALSYKGAFWYKNCHRVNLMGKYGDSSHSKG INWFHWKGHEHSIPFAEMKIRPANFRNLEGRRKRS NT seq 5148 nt NT seq  +upstreamnt  +downstreamnt atgtcttcaagaggtctgacattgagctgtttgcttttaatcaccttgatggctctaaat cacgccggccttgtaaagaagctgatcagacagcgtcgggaagctctgaatgttcccggc atccacaatgttaccctttccaactcctccagaccagttattttcaaccatgtctacaac attaaagtcccgggcagccctctgtgctcggtggatttggacgctcctgaaggatcagat gtggagctgagggatgcaccatctgagcacagtgtggatggtagtaatcagattgttttt acacaccggatcaacatccccaaacaggcatgtggctgtacggacggcctgccggatttg aaggatctcctgagtcgactggagatgttggagggtgaagtgtccacattgagggaacag tgcggtgctgagtctacatgctgtagtgcacaggtcacaggtgcaataggaacgaagccc ttctgcagtggacatggaaactacagcactgagacctgcggatgtgtctgtgctcccgga tggaaaggcctaaactgcaccattcccgactgtcctggagactgtagcgatcaaggccgt tgtgttaacgggaagtgtgagtgtttcgaaggcttcaccggtgacgactgcagcactgat gcctgtctgattgactgcggtgataatggtcgttgccttaacgggaagtgcgtttgcagt gagggtttctccggggaatattgcacagagtcggattgccttaacaactgtttgggacgc ggccgctgtgtggatggcgaatgtgtttgcgatgaaccctggactggatttgattgctct gaactcatctgtccgaacgattgctacgatcgcggacgatgcgaaaacgggacttgttac tgtgacagaggattcaccggagaagattgcggggctcttgcttgtccgaatgattgctct ggacgaggtttctgcattgatggacgctgcgtatgcgatgcaggatacaccggcgaggat tgttcgagtttgacctgtccgaataattgcaatgatagggggcgctgttctaacggcgtc tgcatttgtgaagtgggcttccacggagaggattgtgggagaatttcgtgccctagcaat tgcaacaatcgaggtcactgcgttgatggacgttgcgaatgtgatgttggctttcaaggc cacgattgttcggagctcagctgtcctaataattgcaataatcgcggacgttgcgttaac ggtcaatgtgtttgcgatgagggatttgggagcgaggattgcggtcttaaaacctgtcca tcagactgctacggtcgaggtcagtgcgttgatggtgagtgcgtttgttttgctaacttt gcgggtgaagattgcagtgaattgcgctgtcccaatagctgccagaaccgcggacgatgc atcgcaggacagtgtgtgtgcgatgaaggtttcactggcgaagactgcagtcagagaaag tgtcccaatgactgtcttggacgcggacgctgtgttgacggccggtgtgtctgtcaggat ggttttaaaggccaggattgctctgttcccacttgtcctggaaactgcaatgaccacggg cgctgcgtcaatggaaagtgtgtgtgcgatgagggattttttggagatgcctgcagtgac agaagctgtctgaatgactgcagtgatgtgggacagtgcgtcgacggccgctgcatttgt gatgagggatacattggcgaggattgctcagacgtttctccgccggaggatcttaccgtg actgatgtgagcacgcagaaggtgaacctgacgtggaggaatgagatgctggtgacggag tatctgatcacgtatgtgccaacggctccaggcggcctgcagatggacttcagggttgct ggagatcgaacatccgccacagtctctgagcttgaaccgggaatcgagtatctgatcaat gtctacgccgtcctcaacaacaagagaagcattcctgtcagtgccagagtggccacatat ctccctcagcctgaaggcctgcgctttacatccatcacagactcgacagtggaggttgtg tgggagcagctcaacttccctttcgatggctgggagcttatcttcagaaacacgaaagaa gaaaatggaaagattgtgaacaacctgaccccttctcagactacctttgagcaacaggga ctcggaccaggacaggaatatgaagtcactttatcggtcataaagaacaacaccagagga ccagaaaccagctccactgtagtcacaagaatcgattctccggctcaaatcgaagttgcc gatgtgactgaccgatcggcggtgatctcctggtccaaacccttggctccggtggacggg tttaaggtttcgtatgggccgagcacagatcctttaatccaccgtgatgttgagctctct gcctcagagacacagtacagcctggaagacctgaaaccagacactcaatacagagtcgcc ctcagttcacagagaggagacgtgaccagtgaacccatcatagagagcttcaccaccggc ctggatgctcccagtgagctcagagctgtggatcagactgacagcagcatcacgctggag tggaaaaacagccgctcgtccattgatggataccgcatcaaatacggcccaattgcagga ggtgctcatggagaagacatgttccctaaaaaagcaggagacacaacctgggccacaatt acaggcttaaagcctggaacggagtatgggattggagtcacagccgtgcagaatgaaaga gaaagtgaaccagcaaccacaaatgcactcaccgatctggatcctcctcgagacttggaa gttcagagctccactgaaaccagcgtggatctggtctggaagaggccgagggccaagatc tccacctacaggctggcgtatgtgtctgtggaagggcggcgggaggaaattgagctgcca gccagtgcgagcacctccacactgagcggcctgatgcctggcatgagctacacagtgacc ctggtggctgaacgtggacacagaagaagcgctcctgctaccgtcaccgcatccacagag gagcagaagccccagattggcagtctgagtttgtctgatgtatcttgggatagtttcaat gtgtcctggatcattgaggacggtcctgcctttgacagttttgtgattgaagtggcaaat tctgcaggtcccgaaagacaaaacctttcagtatcgggcgatgcacgtgacttatggatg tccggactcagtcctggcacgtcctatatgattacgttgtatggtgtgcatcagggctcg atcctgggctccatcaacgttgaagcagctacagaggcagaaccagagatcgagcatcta ttcgtgtcagacgtcacacctgagagtttccgtctgtcctggaccacagaagacgatgtc tttgaccgatttgtgctcaaagttagagattccagaaagctgtctcaccccagagagttc agcatgtcgggcgatgagagaaccaaagttttaacacagcttttggggggaacagagtat gaaattgagctttacggcgtgacgttggaacggagatcacaacctgttactgcagtggtg aagacaggcctcggagctctacgagatcttcatttctctgatatcacggacacgtcagct gtggtttactggactttacctcgtgctcaacctgactcttacagaatcaccctcatccca atacaaggaggaagtcccatgattgtgcaggtggacggatcgcagtctcaggtttctctg aggaatctgattcctggagagacgtatcaggtgtctgttattgcagtgaagggtctggag gagagcgaacccgtgtctgacacttttaccacagctctggatactccacgcagcctgact gtggtcaatgtcacggactcgagtgcgctgttgttctggcagcctgcggtggctactgtg gatggatatatgatcacatacagcgcagacacggtgccgccgatttcagagcaggtttct ggaaacaccgtggagtttgagatgaactctctggctccagcaactcaatacacagtcagc gtttacgccatcagagaccgagagaaaagtcttccagcgaccgcagacttcactacagat gtggatgctcctcgtgatctggtggccagtaacattcagacggacagtgctgtgctcagc tggacgcctccgcgggccgccatcactggatatacactgacctttcaaaactctgatgcg gatgtcagggaggtgattgtggacccgtctgtggcatctcatactctgtctaatctgaga agcaccacaaaatatacagtcattctgcaggccgtgtctgaagacaagaggagcaggagc atcagcactgaattcactaccgtgggaatgctctacggacaccccagggattgttcagaa gctctgctgaatggagagacgtcctccggtccatacaccatttacataaacggagacgag aagcagccgctcagagtttattgtgacatgaccactgatggaggaggatggatgctgttc ctgcgccgtcagagcggcaagctaaacttctacagaaactggaggaactactctgcggga tttggagacacgagcgacgaattctggctcggactgtcaaatctgcacaaaatcacagcg gccaagcagtatgagatccgcgtggacttgcgtgatggatctgagaccgtttttgccgtc tatgacagattttacatcggagatcctcgttcccgctacaagatccagatcggtgcatac agtggaactgcaggcgactctctgacgtatcaccagaacaggccgttctccacctatgac agtgacaatgacatcgccatcaccaactgtgccctctcatacaaaggcgctttctggtat aaaaactgccatcgagtcaatctgatgggcaaatatggagacagcagccacagcaaaggc atcaattggtttcactggaaaggccacgaacattcgattccctttgcggagatgaagatc cgaccagcaaatttcagaaacttagaaggcagacgaaaaagatcctaa

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