Danio rerio (zebrafish): 100149357
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Entry
100149357 CDS
T01004
Symbol
rims1a
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
100149357 (rims1a)
Membrane trafficking [BR:
dre04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
100149357 (rims1a)
Small GTPases and associated proteins
Rab associated proteins
100149357 (rims1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
PDZ_6
FYVE_2
Zn_ribbon_Nudix
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
100149357
NCBI-ProteinID:
XP_068069154
ZFIN:
ZDB-GENE-090312-135
Ensembl:
ENSDARG00000074680
UniProt:
A0AB32SZR7
LinkDB
All DBs
Position
13:complement(27632629..27767395)
Genome browser
AA seq
1596 aa
AA seq
DB search
MSASVGPRGGPRPPTKQNSMPDLPDLSHLTEEERKIIMAVMARQKEEEAKDEAMLKEEKP
IQAKTVNLVGNKKPPQQNDISLHQQFANYKEQVRRTGPEPQQRQQGQHKDDAPTCGICHK
TKFADGCGNLCSYCQTKFCARCGGRVSLRSNNKEDKVVMWVCNQCRRQQDMLTKSGDWFP
SQVPKPGELGSAVSEPAMCGDPSGDKKMRSRSQNPLDSSISTAHITQTSAPTDPRKCPSA
GPADTPSSRSRSEPPQDRKKPPAASDQNGKPGPRGERRQRLSKIHSEERDTGENRRESRK
LMKTRSQEHDSPETRRTEGEQKPPREQCRTDPNAPHHPGKLRPTEPDGRLHPKSREGGDM
VQDNRGARRWADGRQASLEGPQPTYVPERTAGETGLQGMPAMQGPTPKTNHTPQPPAPGF
KLGPAMPTGPPELREPQEWDRKLQPSHLDPGSAALLRKSKRQKAESMLRNDSLSSDQSES
LRPPPPRPYKSKRGGNKRQMSVSSSEEEAGSTPEYTSCEDVEIESVSERGDWECCPLDPT
AWHHPVTWQPSKEGDHLIGRITLSKRTAMPKEAGALLGLKVVGGKVTETGRLGAFITKVK
KGSLADVVGHLRAGDEVLQWNGKSLPGLTKKEVYNIILNSQAEPQVELIVSRPIGDIPRI
PETSHPPLESTGSSSFESQKMERPSISVLSPSSPSGLRDAPQLLPGQLSVKMWYDKVGHQ
LIVNVLQAKDLPPRSDTRPRNPYVKMYFLPDRSDKSKRRTKTVKKSLEPKWNQTFVYSHV
HRRDFREHMLEITVWDQPRIQEEESDFLGEILIELETALLDDKPHWYKLQTHDVSSIPLP
HPSPFLPRRHGHTETPTKKLQRSQRITETDYDDTIGVVATATENRSRERERERDRDRATT
LEVPDQQRPTQYRSRSVSPHRDEDRGRSRPPNVPAQRSLDEVQHTRRSRSPTRYHDRNRL
QERDYIDDSEVILIHRSMRGRSAECLHTQRSSSKYSSTLPPKMPLLVNGIHKDIYSSTLP
ACLKSKSRLSVVTATHRTVTRRVLRFTDTICISDLQPSLDRVRSASTNCLRPDSNSNSPD
RERSTQSLPRTRPMSPRILIQHASPEDDSWVLEAMFPAQETLHHLSAKPDPQRQSRALDR
PSCQKLGRKMSDSERVQPHSSPAFSSSTAANSSARKVRQLPQVPAKSSSVEQALASEERT
RQMKVRTFRTPAPSSTSQDLERALKNKRELYKEQRRSCDNVSHKSSDSDVSDVSAISRAS
SASRISSTSYMSIQSERPRGRFSRHIRPSSRSMLKSTSVSGEIYTLERTDGSQSDTALGT
LGSEGKKRRSSLSARVVAIVGIPSRRSRSTSQLSQTEAANKKAKGSSQIQRSQETGMAVE
YPRNVMARQASRESTDGSMNSYSSEGNLIFSGMRLGADSQFSDFLDGLGPAQLVGRQTLA
TPAMGDVQIGLMDKKGQLEVEVIRARGLTPKPGSKSLPAPYVKVYLLENGACKAKKKTKI
ARKTLDPLYQQSLLFEESPQGKVLQVIVWGDYGRMDHKCFMGVAQIFLEELDLSSTVIGW
YKLFPPSSLVDPTLAPLTRRASQTSLDSSGPPGTRS
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcggtggggccccgcggcggccctcgcccacccacaaagcagaactccatg
cccgatctgccggacctcagtcacctcaccgaggaggagaggaagattatcatggctgtg
atggctcggcagaaggaggaagaggcgaaggatgaggccatgctcaaagaggagaagccc
atacaagcaaaaacagtgaacctggttgggaacaagaaaccacctcagcagaacgacatc
agtttgcaccagcagtttgccaactacaaggagcaggtgaggcggactggcccggagccc
cagcagaggcagcagggccaacacaaggatgacgcccccacctgtggcatctgccacaag
accaagtttgctgacggctgcggaaacctgtgctcctactgccagactaagttctgtgcc
cggtgcggaggacgggtctctctgcgctccaataacaaggaggacaaagtggtaatgtgg
gtatgtaaccaatgccgaaggcaacaggatatgctcacaaaatcaggagattggtttccc
agtcaagtgcccaagcctggagagctggggtcggcagtgagtgaaccagccatgtgtgga
gacccctctggggacaagaagatgcgctctaggtctcagaaccctctcgactcctccatt
tccactgcccatattacccagacatctgccccaaccgaccctagaaaatgtccttctgca
ggcccagctgatacaccatcatcgcgctcacgcagtgagcctccacaagatagaaaaaag
ccaccagcagcctctgatcaaaatggaaagccagggccaagaggtgagaggcggcaaagg
ctttccaaaatccattccgaagagcgggacaccggagaaaatcgtagagaaagtcgaaaa
ctgatgaaaactcgctctcaggagcatgacagtcctgagacaaggaggacagagggggag
cagaaaccacccagggaacagtgcaggactgacccaaacgctccacatcacccggggaaa
ctccggccaacggagcctgatggacgcttgcaccctaaatcaagggaagggggggacatg
gtgcaagacaacagaggtgcacgtagatgggcagatgggcgacaggcctcattggagggc
ccacagccaacctatgtgccagagaggaccgcgggggaaacaggtttgcagggtatgcct
gccatgcagggtccaacacctaaaaccaaccacacccctcagcctcctgcaccggggttc
aaactgggccctgctatgcccacaggtccacctgagcttagggagcctcaggaatgggac
aggaagttgcagccgagccacctggaccccggctcggctgcacttttgcgcaaatcaaaa
cggcaaaaagcagagagcatgctgcgcaatgattcgctcagctctgaccaatcagagtct
ttgcgaccacccccaccccgcccctataagagcaaacggggtggcaacaaaaggcagatg
tccgtcagcagctcagaggaagaggccggttccacaccagagtacaccagctgtgaagat
gtggagatcgagagtgtcagtgagagaggggactgggagtgctgtccactggaccccact
gcgtggcatcatccggttacatggcagccctccaaagaaggtgatcatttaattggccga
atcactttgagcaagagaacagccatgccaaaagaggctggggctctgctagggctaaag
gtggtcggggggaaggttacagaaactgggagacttggggccttcatcaccaaagtcaag
aaaggaagtctagctgatgtagtgggtcatttacgggctggtgacgaggtgcttcaatgg
aatggtaaatcattaccaggattaaccaagaaagaagtttacaatatcatcttgaattcc
caagcagaaccacaagttgaattaatagtatcaaggccaattggtgatataccaagaata
ccagaaacctcacatcctccattagaatcaactggttcaagttccttcgagtctcaaaag
atggaaagaccctctatatctgtcctgtccccatccagtcccagtggtcttcgagatgct
cctcagcttctgccaggacagctgtcggtgaaaatgtggtatgataaggtcggccatcag
ctgatagtcaacgtactgcaggctaaagatctgccacctagatcagatacacgacccaga
aacccctacgttaaaatgtacttcctgcctgatagaagtgataagagcaagagaaggacg
aagacagtgaagaaaagtctggagcccaagtggaaccagacgtttgtgtactctcatgtc
catcgacgggacttcagagagcacatgctggagattacagtgtgggaccaacccagaata
caggaggaggagagcgactttctgggagaaatcctcattgagctggagactgccctgttg
gatgataaacctcattggtacaagctgcagacccatgacgtgtcctccatcccactgcca
catccgtcgccattcctgccccgcagacacggacacacagagacacccaccaaaaaactg
cagcgctcgcagcgtattacagaaactgattatgatgatactattggcgtagtcgccaca
gctacagaaaaccgatccagagaaagagaacgagagcgagacagagaccgagcaacgaca
ttagaggttcctgaccagcagagaccaactcagtatcgctctcgatccgtgtctccacac
cgagacgaggacaggggaagatcccgacctccaaatgtcccagcacagaggagtctggat
gaagtccagcacactcgaagatcccgttccccaacccgataccacgaccgcaaccgtctt
caagaaagagactacatagacgacagtgaggtcatcttgatacacagatcaatgcggggt
agaagcgcagagtgtctgcacacccaaaggagttcatctaagtacagtagcactctgcct
cccaagatgcctttattagttaatggaattcataaggatatttacagctcaacacttcct
gcatgccttaagtcaaagtcacggctgtcagtagtcactgccactcatcgtacagttaca
cgtcgagttcttaggttcacagacacgatctgcattagtgatctgcagccctctcttgac
agggttagaagtgctagtaccaactgtctgagaccagattctaattccaattcacctgat
cgagaaaggagcacgcagtctctgccccgtaccagacccatgagccccaggatcctaatt
cagcatgcctccccagaagacgacagctgggttttggaggcaatgttccccgctcaggag
acactgcaccacctcagtgcaaagccagacccacagaggcagtcaagagctctggacagg
ccgagctgtcagaaacttggcaggaaaatgtctgacagcgagcgggtgcaaccacactcc
agccccgcattctcatcatcaacagcagcaaattcatccgcacgcaaggtcagacagctt
ccccaagtccccgccaaaagcagcagtgtagaacaagctcttgcgtcagaggagcgaacg
cggcaaatgaaagtacgaacctttcgaacaccagctccctccagtaccagccaggacctg
gagagggcgctcaagaataaacgagagctttataaggagcagcgaaggagttgtgacaat
gtgtcccataagtcctcagacagtgatgtcagtgacgtgtcagccatctctcgtgccagc
agtgcctcgcggatcagtagcaccagctacatgtccattcaatcagaacgacccaggggt
cgctttagccgtcatattcgtccatccagccgcagcatgctgaagagtacgagtgtcagt
ggggaaatctatactctggagcgtacggatggcagccagtcagatactgctctgggaaca
ctgggatcagaagggaagaagcgcagatccagccttagcgcacgagtagtcgccatcgtg
ggcatcccctcccgccgcagcaggagcacctctcagctcagccagacagaagcagccaac
aagaaagcaaaaggatccagtcagattcagcggagtcaggagacaggaatggcagtggag
tatccccgaaatgtcatggcccgacaggccagccgagagtccactgacggcagcatgaac
agctacagctctgagggcaatctgatcttctcagggatgaggttaggggccgacagccag
ttcagtgacttcttagatggtcttggtcctgctcagttggtgggtagacaaactcttgcc
acacctgctatgggagatgttcagattggactgatggataagaaagggcagcttgaggtg
gaggttatcagggcccgtggtcttacacctaaaccaggttccaaatcgctgccggctccc
tacgtcaaggtctatttgctggagaatggagcgtgcaaagccaaaaagaaaaccaagatt
gcacggaaaacgcttgatcctttgtatcagcaatcgctgttgtttgaggaaagtccgcag
ggtaaagttctccaggtaatagtctggggagattatggccgcatggaccacaaatgcttc
atgggagttgcacagatttttctagaggagctggatctttctagcacagttattggctgg
tacaaactgtttcccccgtcatcattagttgacccgactttagctccactcacccgtcgc
gcttcccaaacatcactggactcttcagggccaccgggcaccaggtcctaa
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