Danio rerio (zebrafish): 100150678
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Entry
100150678 CDS
T01004
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100150678 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dre03021
]
100150678 (taf4b)
03036 Chromosome and associated proteins [BR:
dre03036
]
100150678 (taf4b)
Transcription machinery [BR:
dre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100150678 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
100150678 (taf4b)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
100150678 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
100150678
NCBI-ProteinID:
XP_017208212
ZFIN:
ZDB-GENE-070424-105
Ensembl:
ENSDARG00000075732
UniProt:
A0A8M6YWV6
LinkDB
All DBs
Position
20:18260412..18296237
Genome browser
AA seq
833 aa
AA seq
DB search
MSETSVSDKLENDNLRTQTEKKNEAQTNNIENLSETSDKKREVTDLNANVITNRNPDSVS
LNEKADPKTEAGSSNAAPQGPVTVSLLTSSTSASSEAAPKVMVGPAQIKSTTPVVVGARV
VTSSVQGPGTTSLALVPQPGRVSVAISQPRVTTLTTAKGPVMTLPRISTPSQGVPMTRAP
QTVPLQLPANFQVPQGMVLIRSDSGQLMLVSQQALAQAQGMLPKAASANASAIVRPPSSQ
ATVNTTPIIRVSLPPTSASATANIKLNPTVGTAVQKPAAATGTAVFTPSCSAGTTISKPA
AVVCTAVRKPSSTMGPVIKASQMTPNSSTPGTFNQRTNSVTATTVINTSAGKSVGKGGPS
IQSNAPRVVSPNVPPRSSTNTSSTPVTVTAETLENVKKCKNFLVTLMKLASSGTRSANMA
QNVRALVKGLLDGKLEAEEFTEKLYMELKSSPQPYLVPFLKRSLPAVRQLTPNSQLFIQQ
CDHLKPSDSALTKSTNQKASASVSSSLKNSQPTRTPQLVQTTGVVVKQPQVGLAAQSQTQ
SKQMVIQTSTHSTGAVVRQSILQASKTHFSQPTLPAQAHSFKDSTSGSFRDDDDINDVAS
MAGVNLSEENARILASGSELVGSVIRSCQEEPFLFPSALQTRVLHIGGSLGVTEVCPDVL
ELISLATQERLRDLLEKITAVAQHRQISYRDDWRYTQTNDTRSQLKFLEQLERLEKQKRE
EEERETLLRIARSRSNSEDPEQQRLKQRAKEMQQLELAQMEHRDANLAALAALGPRKKKP
LEAPGLGANQLLGSHGHFASRAPVRVTMRDLTFYMEQDPTFRHTLVLYRAFLG
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaacgtcggtctcagataagttagagaatgataatcttcgtacgcaaacagag
aaaaagaatgaagcgcaaacaaacaatatcgaaaacctttcggaaacttcagacaagaaa
agagaggtaacggacttaaacgctaatgttatcaccaacagaaacccagattcggtttcc
cttaatgagaaagcagacccaaaaacagaggctggttcatcaaacgctgcacctcagggt
cctgtgacagtctctctactgacctccagcacatcagcctcatctgaagctgctccaaag
gtcatggtaggccccgctcagatcaaatccacaacacccgtggtcgtaggggccagagtt
gtgacgtccagcgttcagggaccagggaccacaagtttggctctggttcctcagcctgga
agagtttcagtggccataagccagcccagagtcaccacactgaccactgccaaagggccg
gtcatgacattgccaaggatttccactccatcacaaggtgtgccaatgacgcgcgcccct
cagacggtgccactgcagctgcccgccaacttccaggtaccacaaggaatggtgttaatc
cgcagtgacagtgggcagttgatgttggtatctcagcaggctctggcccaggctcaggga
atgctgccaaaagcagccagtgccaatgcctcagctatagttagacctccgtcctcacag
gcaactgtaaacaccacaccgatcatcagagtttctctccctcctacaagtgcatcagct
accgccaatattaaactcaaccctactgtggggactgccgtgcagaaaccagccgcagct
acaggaactgctgttttcacaccatcatgttcagcaggaaccaccatcagtaagccggcc
gctgttgtatgcacagccgtcagaaagcccagctctaccatggggccagttatcaaagcc
agtcaaatgactccaaacagcagcacaccagggacatttaaccagaggactaattctgtc
actgcaactacagtaattaatacctccgctggaaagtctgtgggcaaaggtgggccctcc
atccagagtaatgccccgcgagtggtgtctcctaatgtaccacccagatccagcacaaac
acatcctcaacaccggtcactgttacagctgagaccttggagaatgtgaagaagtgtaag
aacttcctggtcactcttatgaagctggcatcaagtggcactcgctctgctaacatggcc
caaaacgtccgcgctcttgtcaaaggcctgctggatgggaaacttgaggctgaagaattc
actgagaaactctacatggagctcaaatcgtctcctcagccatatctagtgcctttcctg
aagaggagtctgccagccgtccgtcagctcacgccaaactcgcagctcttcattcagcag
tgcgaccatctcaagccttcagattcagccttgaccaaatccacaaaccagaaggcctct
gcgtctgtcagctcctccctcaaaaacagccagccaacccgaacacctcagctggtgcaa
actacaggagtggtcgtcaaacagcctcaggtgggcttagctgcccagagccaaacccag
tccaaacagatggtcattcagaccagcactcattcaacaggtgctgttgtgcggcagtcc
atccttcaggcgtctaaaacacacttttcccagccgacccttccagcgcaggcacacagc
ttcaaggacagcacctcgggctctttccgtgatgacgatgacattaatgatgtggcctcc
atggctggagtgaacctgagtgaagaaaatgctcgtattttggcctctggctctgaactc
gtgggatcagtgatccgctcctgtcaagaagagccctttctattcccatcagccctccag
acacgagtgctgcacatcggtggctctttaggtgtcacagaggtctgtcctgatgttctt
gagttaatctctctggcgacacaggagagacttcgagacctgctggagaagatcaccgct
gtggcacaacatcgacagatctcttatagggatgattggcgctacactcaaaccaatgac
acacgctctcagctgaagttcctggagcagctggaaagactggagaagcagaagagggag
gaagaggagcgtgagacactactccgcatcgcccggagtcgctcaaacagcgaagaccca
gagcaacagcgcctaaaacagagagccaaagagatgcagcagttggagttggcacagatg
gagcaccgagatgcaaatttggcagcgctggctgccctcgggccccgtaagaagaaacct
ctggaggctccaggcttaggggccaaccagttgttaggttcacatgggcactttgcttct
cgagctcctgttcgagtcactatgagagatttgaccttctacatggagcaagaccccaca
ttcagacacactctcgtgctctacagagcctttctaggttag
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