Danio rerio (zebrafish): 100150704
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Entry
100150704 CDS
T01004
Symbol
gabra2a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04080
Neuroactive ligand-receptor interaction
dre04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100150704 (gabra2a)
04082 Neuroactive ligand signaling
100150704 (gabra2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
100150704 (gabra2a)
Ion channels [BR:
dre04040
]
Ligand-gated channels
GABA-A
100150704 (gabra2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF5522
Motif
Other DBs
NCBI-GeneID:
100150704
NCBI-ProteinID:
XP_009305482
ZFIN:
ZDB-GENE-141216-16
Ensembl:
ENSDARG00000091459
UniProt:
E7F635
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All DBs
Position
13:12119940..12154900
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AA seq
451 aa
AA seq
DB search
MILRRGHSHGFLIHLFLLVLWRACSEAEVSGSDAFKNNITLFTRILDRLLDGYDNRLRPG
LGDRVTEVKTDIYVTSFGPVSDTDMEYTVDVFFRQRWTDERLKFHGPMNILRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRIMENGTLLYTMRLTVQAECPMHLEDFPMDFHSC
PLKFGSYAYTLTEVTYVWTRNATLSVEVAPDGSRLNQYDLMGQTVGKETIKSSTGEYTVM
TAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSIVNDKKKETSVM
KKNNAYAVAVANYAPHIAKDSALPTVSKSATPEPSKAQPVAKETKKTFNSVSKIDRMSRI
IFPVLFGSFNLVYWATYLNREPVIKNMVPSP
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgattctgcgacggggtcattctcacggatttctaatccacctgtttctgctggtttta
tggcgtgcatgttctgaggcagaagtatccggctcagatgcctttaaaaataacattacc
ctcttcacgcggatcttggaccggcttttggatggctacgacaacaggctgagacctggt
cttggagatcgagtgacagaggtgaagactgatatatatgtgaccagttttggaccagtg
tccgatacagacatggaatacacagtggatgtgtttttccgacagcgatggacagacgag
cggctcaagtttcacgggccaatgaacatcctgcgtctcaacaacctgatggccagtaaa
atctggactccagacactttctttcataacggcaagaaatctgtggctcacaacatgacc
atgccaaacaaactcctgcgcatcatggagaacggcaccttactctacaccatgaggttg
actgttcaagctgaatgcccaatgcatcttgaggactttccaatggatttccattcatgt
ccacttaaatttggtagctatgcgtacaccctgacagaagtgacgtacgtttggacacgt
aatgccaccctgtcagtggaagtggctccggatggatctagactgaaccagtacgatctg
atgggacaaactgttggcaaagaaaccattaagtccagcactggtgaatatacagtaatg
actgcccatttccatctgaagcggaagatcggatactttgtgatccagacgtacctgccc
tgcattatgaccgtcatcttatctcaagtctctttttggctcaacagagagtcagttccg
gcacgcacagtttttggtgtgactacagtgctaaccatgaccactctgagtatcagcgct
cgaaactctttaccgaaggtggcctatgctacagccatggactggttcatcgcagtgtgc
tacgcctttgttttctctgctctcattgagtttgccacagtgaactacttcaccaagcgc
ggctgggcctgggacggaaagagcattgtgaatgataagaaaaaagagacgtccgttatg
aaaaagaacaatgcgtatgcagtcgctgtggcaaactacgcaccccacattgcaaaggac
tctgctttgcccactgtctctaaaagcgctacaccagagcccagtaaagcacaaccggtg
gccaaagaaacaaagaagaccttcaacagcgtcagcaagatcgaccgtatgtcccgcatt
atctttccagtgctctttggcagctttaacttagtttattgggcaacatatcttaacaga
gaacctgtaattaagaacatggtaccctccccgtga
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