Danio rerio (zebrafish): 100151059
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Entry
100151059 CDS
T01004
Symbol
lingo3b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
100151059 (lingo3b)
Membrane trafficking [BR:
dre04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
100151059 (lingo3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
Ig_3
I-set
LRR_1
ig
LRR_EndoS
LRR_LRWD1
Ig_2
LRRNT
LRR_9
V-set
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
100151059
NCBI-ProteinID:
XP_017207970
ZFIN:
ZDB-GENE-120419-1
Ensembl:
ENSDARG00000067815
LinkDB
All DBs
Position
2:complement(60897839..61687915)
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AA seq
605 aa
AA seq
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MASSWAVSRLCGLGLLLALAAPSCSGCPPRCDCAAQLRSVSCQRRRLSAVPEGVPTETRL
LDLSRNRLRWVAAGDLAPYPRLEELDLSENLISTLEPNAFANLQALRTLRLRANQLKLVP
MGAFARLTNLTTLDLSENRIVILLDFTFQDLRSLKNLEVGDNDLVYISHKAFSGLLSLED
LTMARCNLTSISGQTLSYLRGLVTLRLRHLSISTLEEQNFRKLTALRGLEIHDWPFLEFI
SPLSFQGLNLSWLFITNTNITSVPSASFRNLAYLTALNLSYNPISTLESWAFRDLIRLKE
LHMVSTNLLTVEPHALGGLRQIRVLNLSNNDLVTLEESSFHSVNSLETLRVDGNPLSCDC
RLLWILQRRRTLNFDGKMPVCAGPPEVQGYLLSMFTDSALFDYFTCQKPKIRNRKMQQVM
VHEGQPVSFLCRAEGEPTPAIIWISPQRRRITSKSNGRVTVLPGGTLEIRYAQLTDSGTY
ICIASNAGGNDTYFATLTVKGQPVDAAIFSNRSMYAMDFNETGLNSTRVFLKFTLDLTTI
LVSTAMGCIMFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSFRKTEGPATTGSSGGTRKF
NMKMI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcatgggccgtgagtcgtctctgtgggctgggtctgctcctggcgctggcg
gctccttcatgttctggatgtccgccccgctgtgactgcgctgctcagctgcgctctgtg
tcctgccagcggcggcgtctatccgccgtccccgagggcgtccccacagagacccgcctg
ctggacctgagccggaaccgcctgcgctgggtggctgccggagacctggccccgtaccca
cggctggaggaactggacctgagtgagaacctgatctccacgctggagcccaacgccttc
gccaacctgcaggccctgcgcacgctgagactccgggcaaaccagctcaaactggtgccc
atgggagccttcgctcgcctcaccaacctcaccacactggacctgagtgagaaccggatc
gtcatcctgctggacttcacctttcaggatctgcgcagcctcaagaacctggaggttgga
gacaatgatctggtctacatctcccacaaggcgttctcaggtctgctgtctcttgaggat
ctgaccatggcgcggtgtaacctgacctccatctcgggccagactctgtcgtacctgcgt
gggctggtgaccctccgcctgcgccacctcagcatctccaccctggaggagcagaacttc
cggaagctgacggcgctgcggggcctggagatccacgactggccctttctggagttcatc
tccccgctcagcttccagggactcaatctgtcctggcttttcatcaccaacaccaacatc
acatccgtaccatctgcttctttccgaaatctggcttacctgacggctctgaacctgtcc
tacaaccccatcagcacgctggagtcctgggccttcagagacctcatcaggctgaaggag
ctgcacatggtcagcactaacctcctcacggtcgagcctcacgctttgggaggtctgcgt
cagattcgagtcttaaatctgtccaataatgatctggtgacgctggaggagagctccttc
cactcggtcaacagcctggagacgctgcgtgtggatggaaaccctctgtcctgcgactgc
cgcctgctgtggatcctgcagcgcagacgcacactcaacttcgacgggaagatgcccgtg
tgcgccggaccgccggaggttcaggggtatctgctgagcatgttcactgattcggcactg
ttcgattatttcacctgccagaagcccaagatacgcaaccgcaagatgcagcaggtgatg
gtgcacgagggtcagccagtatctttcctatgtcgagccgagggcgaaccgacaccagcc
ataatctggatttctcctcaacgcagaagaattacgtccaaatccaacggcagggtcacg
gtcctcccaggtgggacgctggagatccgatacgcccagctaacagacagcggcacctac
atctgcatcgccagcaacgccggcgggaacgacacctacttcgccacgctaacagtcaaa
ggtcaaccggtggacgctgcgatttttagcaaccgatcaatgtacgcgatggacttcaac
gaaacgggtctcaacagcacgcgcgtgtttctcaaattcacgctggatctgaccaccatc
ctggtgtccaccgccatgggctgcatcatgtttttgggtgtggttctcttctgtttcctc
ctgctgttcgtgtggagccgtggacgcggccagcgcaagaataacttcacagtggagtac
tccttcaggaagacggaaggacccgccaccaccggcagctccggaggaacgcgcaagttc
aacatgaagatgatatga
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