Danio rerio (zebrafish): 100151439 Help Entry 100151439         CDS       T01004                                  Symbol rttn Name (RefSeq) rotatin isoform X1   KO K16484   rotatin Organism dre  Danio rerio (zebrafish) Brite KEGG Orthology (KO) [BR:dre00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:dre03037]     100151439 (rttn) Cilium and associated proteins [BR:dre03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    100151439 (rttn) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RTTN_N TPR_Trm732_C DUF383 Sdh5 Motif Other DBs NCBI-GeneID:  100151439 NCBI-ProteinID:  XP_005162716 ZFIN:  ZDB-GENE-090609-5 Ensembl:  ENSDARG00000004131 UniProt:  E7F7S8 LinkDB All DBs Position 24:complement(15132128..15263084) Genome browser AA seq 2235 aa AA seqDB search MELSSLIKKIGHSLVEIRVRALKNIRSKLDHGLISVPDLVQEKMLFVFLLEWFNFPEVPM QEEVLELVDMLSKHPTGAQMLREVGAVEFLTQLSPNVDLRLRTIVDGVFDQLFHLPGALP CCPPTTSYEPHLQTEEEPPAGGFFQCSKPKQTDAPTPRVPFSTRCLKFSVFPWLSLNTTD RHILSSNESSLRSDNHNLVRTTCELLRDVIMQDFPAEIFLQRPSTVQSLLSLLGLNVDGD VSYLTFQALACLQQLCRNLKSRLRFYRDPSFFSAKQDPVSQNSSISYPQEVRGTQRSGVS SPEESSPRPSVVGRPGQRLRGDGQDGDAASASSSSSSHRGAPLRPAQQSPLPSAHPELPP EMMMETEDALELQLQQWSLARFAVAAVEHALPLIRTESLKVFQRVLELLAEAQGLLGDSV APEVWDEHSLTATELREKLQACIEILGDVICYHHGMTSSEHPESSLIHHRMVFTGTAVFT IRLLQTLLPVEKAADNLPESTVAAIFLLCLDISFSVAFPVIHESAVAYLEQACFERYSLY RRVSRISHCMEATCTFLKDAQAEGDKNWHELLELADQGVDAFPYHQHLPVVKECVQICSY LWKFAQASPLLQSESQKIFLKLLSHPLSPVKAETYSCTLSILKECLGVQNVAKPASSICA GVHFLLHSRVLYEISVFGLQDQATEVSAAAKDILLYLLKGRLMMTAASWRRFNEALYPVI PILQSYAGTEDALGNCILLLSEASAEKGDEMRSPTARLRAALRLLFTKQHTVRKMAVQHL LPHLTSAEGAQNSRPTLDSSTLSCLPNLYNLNKSVDIKFSSSDKSYVKVESVNKLYNILA SETVDLVLRKSAAEQLAIVLQDSSMHAVLKALGLSDKLTSFITECVNSNVPSMDCLLESS ACMLRKLVFADPSLRHSLAQQTTFLITLLRASLIIKENQGDVSEAAALMCILLFDEIARM DVWTDEAGSDTGLSSFSLPAAIIRRYNLPFQAPSHHAVSPYCSVLPPYSDLLSLKPAWEA LQITWNTAWHSGIDGLLEHLRGFRSDVPEFHSDLVLSESQAVVLRISNMRSGIEDCIHTV CDASSHSTVTFAITRMHLYLLFDFLALKSTTQSCKNILQTLSWHSAVERFLVVRPACHQD ERLLVDILSFLNTFFKQNQSELDQQDLKWLLELLLNQESHTLLNLLLSADPQNHTHVQSQ GEVDKLQAHLSHRLQRELTGLFNTLLLLMTFTSDRMCEVLSGPFASELSLRLLQCLRLSD APCFYGLPSLERTLRTMAHVTALPGWSTHTPSVEPNTLCLKYLSGLLEVISSFYVDLGGN SMSFMGKGVTKNAVICLLHLSHEMMKESTNKDWISLWSLGREQSADEQSAAQLGLAWLIP LWVDRDPEVRCASLAVGAALSSLERGCVALSASCQNISGGLWATVLNILLEKQECSMVRR EAAFILQNLLVMPMPANAEEAKECAWQSPCVHDEDSGLCLVGLPALQALLYHCQFFESVG QMVKSCYTGRHAFTLSPPPPPANVTQDADLNDSLKHWREMLVPLNQTHPSGSMSTSSTLI PSGSCSGTHSPVPTSGVCANQEAPVNRLTAQGQSDTDSSDSALTQDSHPGGRSEPVAIVT PHLLLAVCGLLDNLLAVLPEFTFSALQQNQILQGMASVVDAAAISQCVNELKTPLLPAAM EDARNQVLSSLYYVQSFCKLLQSATIHSEDVPLHREYFKLLLNNLISILTLPVADLDAQT QGAVLNTWSDVLTLLATLLRRNQAAVGPSVAVALGKHWQRFSDTLGVCLDQSDGESSLYI STLHFLCVLFSDEAKRRTGGHMEDLSSSSITAVLASESGEVICELLLEQYEKISFQDPLK KMVAKALMSLLACCSSAQSYACKAGVIDSCVERMKHIYAELHLESVKTGRNAHRRKQVEN SMRELKMILEMLRNCLYQHNECKAVATDLRLAVVLLAFWPWLLLDDLTMAAALELLCVYT ANCTAACSALCFSSSSSSVSVGSVQPVLPKTAVTNSLMHAVMKLASQVAPDNSSIHSLAF SLLANLAISRDGKGLLLKCNFLQNFLSLPMPKASGRGGAPAVETLSLWLRLLLNVSFGED GQQMILRLRGALELLVELTQSKHSSAKPTVLLILHNICFCSANKPKVLANDKAVELLVSC LSSSSSDIRNIGASALWALLHNNQKAKATLKCPSIRLKVEEAFVSARKDEEQSNDKAVNI YHLKCLRNLSNIFNS NT seq 6708 nt NT seq  +upstreamnt  +downstreamnt atggagttatcgtcactcataaagaagatcggtcactccttagtggaaatcagggtccgg gctcttaaaaatatcagaagcaaattagatcatggcctcatctctgttcctgatctggtc caagagaagatgctgtttgttttcctcctagaatggtttaattttccggaggttccaatg caggaggaagttctggagttggtcgacatgctttcaaagcacccaaccggagcccaaatg cttcgagaggtcggggctgtcgaattcctaacacaactctcgcctaatgtggatcttcgt ctccgaacaatcgtagacggcgtcttcgatcagctcttccacctcccaggggcccttcca tgttgtccacccaccacctcctacgagccacacttgcagacagaagaggagccgccggct gggggatttttccagtgcagtaaacccaagcagacagatgctcccacccccagagtacca ttcagtactaggtgcttgaagttctctgtttttccatggctgtctttgaacacaacagat cgacatatattgtcatcaaatgaaagttcccttagaagcgacaaccacaacttagtgcga accacctgtgagctgcttcgtgatgtcatcatgcaagacttcccagctgaaatattcctg caaaggccaagtacagttcaaagtctgctgtcacttctcggtctgaatgttgatggtgat gtcagctacctgacgttccaggcattggcctgtctgcaacagctttgcaggaacttgaag agccgcctacgattttacagagatccaagcttcttctcagccaaacaagaccctgtgtct cagaactcatccatctcgtaccctcaggaggtgagaggaacccaacggtctggagtgtct tctccagaagaaagctcccccagaccttctgtggtgggcagacccggtcaacggttgcgt ggtgatggccaggacggagacgctgcttctgctagcagcagcagcagcagtcatagaggg gctccccttaggccagcccagcagtctcccctcccgtctgcccacccagagctccccccg gagatgatgatggaaacggaggatgcgctggagctccagctgcagcagtggagcctggct agattcgccgtagcagccgtagagcacgctctgcctctcatcaggacagaaagcctgaag gttttccagcgggtgctagagctgctggcggaggcgcaggggctgctgggagacagcgta gcccctgaggtgtgggacgagcacagcctgactgcgacagagctgagagagaaattacag gcatgtatagagattttgggagatgttatttgctaccaccatggcatgacttcctcagaa catccagaatcgtctctgatccaccacagaatggtcttcacaggcactgccgttttcaca atacgtctcctgcaaaccttgttacctgtggagaaggctgcggataatcttccggaaagt accgtggctgccattttcctgttgtgtcttgatatatccttcagcgtggcgttccccgtc atccatgagtcagccgtggcgtatctagagcaggcttgctttgaaagatacagcctgtat cgtagagtgtcccgtatttctcattgcatggaggcgacatgcacctttttaaaggatgca caggctgagggcgataagaactggcatgagcttttggagcttgctgaccaaggagtagat gcttttccatatcatcagcacctaccggtggtgaaggaatgtgtccagatttgctcctac ctgtggaaatttgcacaagcaagcccgcttctgcagtcggagagtcagaagatatttctg aagcttttgtctcatcctctgtccccagtgaaggcagaaacctactcctgcactctgagc attttgaaggagtgtttgggagttcagaacgtggccaaacctgcctcatccatctgcgcc ggagtgcatttcttgcttcactcccgtgtcctgtatgagatcagtgtgtttggccttcaa gaccaagcaacagaggtgagtgccgctgccaaggatattctgctttatctgctgaaggga cgattgatgatgacagctgcaagttggaggagatttaatgaggcactttacccggtcatt cctatattacagagctacgcaggcactgaagacgccctgggaaactgtatcctgctgcta agtgaagcatctgctgagaaaggagatgagatgcgttccccgactgctaggctacgggca gccctccggcttctgttcaccaaacagcacaccgtgaggaaaatggcagtccaacatctg cttccacatctgaccagcgcagagggggcccaaaactccagaccaaccctggacagctcc actctatcatgtttaccaaatctctacaatcttaataaaagtgtggacatcaagttcagc agttcagacaagtcatatgtaaaggtggagtctgtaaataagttgtacaatattctcgca tcggaaacggtagatcttgttttacggaaatctgcagctgaacagttggctattgttctg caagattcatcaatgcacgcggtgctgaaggccttgggtttatcagacaagctcacgtct ttcatcacagagtgtgtcaacagcaatgtgccgagcatggattgcttgttggagtccagt gcatgcatgctgaggaagctggtttttgcagacccctctctgcgtcacagtctggctcaa cagacaacttttctcatcacgctgctcagagcttctctgatcataaaggagaaccagggt gatgtgagcgaggcggctgcgttgatgtgcattctgctgtttgatgaaatcgcacgaatg gatgtttggactgacgaagctggctcagacacaggcctgtcttccttctcacttcctgca gccattatacggaggtacaatttgccgtttcaagctccttcacatcatgcagtgagtcca tactgttcagttcttcctccatactcagatctcctgagtctgaagcccgcctgggaagct ctgcagatcacctggaacacagcatggcattctgggattgatggattgctagagcacctg aggggttttagaagtgatgtgccagagtttcatagtgatctggtgctgtctgaatctcag gctgtggtgttaagaatcagcaacatgaggtccggtatagaggactgcattcacacggtt tgtgatgcgagctcccacagcaccgtcacttttgccatcactagaatgcatctgtatctt ctttttgacttccttgcactcaaatccaccacgcaaagctgcaagaacattctgcaaacc ctcagctggcacagtgctgtagagagatttctggttgtacgtccagcttgccatcaagat gagaggctcctggtggacattctgtccttcctcaacacgttcttcaagcagaatcaatct gaactggaccagcaggaccttaaatggttgttggaattactcctaaaccaggagtcgcac acactgctgaacttgttgctgagcgctgatccgcagaaccacacacacgtccagtcacag ggggaagtggacaaactccaggcccacctcagtcaccggctacagagagaactgacaggc ctcttcaacacattgctgcttctgatgacattcacttctgacaggatgtgtgaggttttg tctggaccgtttgcctctgaactgtctctgcgtctgctgcagtgtctgcgcctgtctgat gctccgtgcttttacggcctgccgtctctagagcgcacactcaggaccatggcccacgtg actgccctgcccggctggagcacccacactcctagcgtagagccaaacacgctctgtctc aagtacctcagcggccttctggaagtcatatcttcattctatgtcgatttgggaggaaat tcaatgtcctttatgggcaaaggagtaacaaaaaatgcagtgatctgcctgcttcatttg tcacacgagatgatgaaggaaagcacaaataaggactggatatccttgtggtctctgggg cgagagcaaagtgctgatgagcaaagtgccgctcagcttggcttggcctggttaattcct ctgtgggtggatcgtgaccctgaggtccgctgtgccagtctggcagtgggtgcggctctg agttcgctggagagagggtgtgtggctctgtctgcgagctgccagaacatttctggcggc ctgtgggccacagtactcaacatcctgctggagaaacaggagtgcagtatggtgcgcaga gaggcagcgtttattttgcagaacctccttgtgatgccaatgcctgcaaatgcagaagag gccaaagagtgtgcctggcagagcccctgcgtgcatgatgaggattcaggcctgtgtctg gtcgggcttcctgccctgcaggctctgttgtaccactgccagttttttgagagcgtgggc cagatggtgaagagctgttacacgggcagacatgccttcaccctcagcccccctccgccg ccagccaatgtcacccaggatgcagatttgaatgattctctgaagcactggagagagatg cttgttcctctaaaccagactcatccctctggatctatgtccacctccagtactctgatt ccatcaggaagctgcagtgggactcattctccagtcccgacctcaggtgtctgcgctaac caggaagctccagttaacagactcactgctcagggtcagagtgacactgacagctcagac tctgccctcactcaagactcacaccccggggggcggagcgagcctgttgctatagtgacc cctcacctgttgctggctgtttgtggtttattggacaacctgctggcggtgcttccggaa tttactttctctgccctccaacagaaccagatacttcagggcatggccagtgtggtggat gcggcagccatatctcaatgtgtcaatgagctaaaaacacctctcctgccagctgctatg gaagatgccaggaaccaggtgctgagtagcttgtattatgtgcaaagtttctgtaagctc ctgcagtcagcaacgatacacagtgaggatgtgccgctccacagagagtacttcaaactc ctgctgaacaacctcatttccatcctcacgctgcctgtcgctgacttggatgcgcagacc cagggtgcagtgctcaacacctggtcggatgtgttgacgcttctggctactctgctgcgc aggaaccaagctgcggtcggcccatctgtcgctgtggcactggggaaacactggcagcgt ttttcagacaccctcggagtgtgtttggaccaatcggatggtgagtcttctctctacata tcgactctgcactttctgtgtgtgctgttctcagacgaggctaagaggagaactggagga cacatggaggatctgagcagctcctccattactgcggtcttggcttctgagtctggagaa gtcatatgtgaactgttactagagcaatatgagaagatttcattccaggaccctctgaaa aaaatggtggccaaagcacttatgtctctcttagcctgttgctccagtgctcagagttac gcatgtaaagctggtgtgattgacagctgtgtggagcgcatgaagcacatttacgcagag cttcacctggagtctgtgaagacaggcaggaatgctcacaggaggaagcaggtggagaac agcatgagagaacttaagatgattctagagatgttgcgaaattgcctgtatcaacataat gaatgcaaagctgtggctacagatttgcgtctggctgtcgtgctgttggctttttggccc tggctcctgcttgatgatctcaccatggcagcggctctggaactgctctgcgtctacaca gcgaactgcacagcggcttgcagtgctttatgtttcagcagcagcagtagcagtgtcagc gttggctccgttcagcctgttcttcctaagactgcggtcacaaactcactgatgcatgca gtgatgaaactggcctcccaggttgcccctgacaacagcagcatccacagcctggctttc tcactgctggccaacttggccatctccagggatggcaaagggctgctactgaagtgtaac tttctgcagaacttcctgtctctccccatgcctaaagccagtggtcgaggcggtgctcca gctgtggagacattgtctctctggctgcggctgctgctgaacgtgtcatttggagaggac ggacagcagatgatcctcaggctcaggggagctctggagctgctggtggaactgactcag tccaaacactccagcgctaaacccaccgtcttgctcatcctccacaacatctgcttctgc tccgctaacaagcccaaagtcttagccaacgataaagctgttgaactgctagtctcttgt ttaagcagtagctcatcagatatccgcaacataggagcttctgcactttgggctttgttg cacaacaatcagaaggcaaaagccactttgaagtgtccttccatcagactgaaagttgaa gaggcattcgtgtccgcaaggaaagatgaagagcagagcaatgacaaagctgtgaacatc tatcatctgaagtgcctccgaaatctttccaacattttcaactcataa

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