Danio rerio (zebrafish): 100170827
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Entry
100170827 CDS
T01004
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100170827 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dre01007
]
100170827 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dre03016
]
100170827 (vars2)
Enzymes [BR:
dre01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
100170827 (vars2)
Amino acid related enzymes [BR:
dre01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100170827 (vars2)
Transfer RNA biogenesis [BR:
dre03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100170827 (vars2)
Prokaryotic type
100170827 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
Motif
Other DBs
NCBI-GeneID:
100170827
NCBI-ProteinID:
NP_001124133
ZFIN:
ZDB-GENE-060503-575
Ensembl:
ENSDARG00000056717
UniProt:
B3DIT4
LinkDB
All DBs
Position
19:complement(29815950..29865437)
Genome browser
AA seq
1057 aa
AA seq
DB search
MWKPVHVASPRIWSKFGCRLCSENSSNTQSLSHPRTQAEKAKRRQAREKAILSSDLNDDG
LSWSDKEKIKYAAKLSPGEKKDTTLPFPQSYSPEYVEFGWYQWWEKQGFFSPEQHSKQPH
AVDKHFSLCIPPPNVTGTLHLGHALTVAIEDALARWRRMQGYKVLWVPGCDHAGIATQSV
VERKLLREQGKSRQDFSREEFLKQVWMWKNEKGDEIYHQLRKLGASLDWSRACFTMDPAF
SSAVTEAFVRLCDSGLIYRAEGLINWSCTLESAISDIEVDSKELPGRTLLSVPGYQQKVE
FGTMVTFAYPLEGQEGEVAVSTTRPETMLGDVAIAVHPDDPRYKHLHGKRCRHPFTEQLL
PIVTDTTVDMTFGTGAVKLTPAHDHTDFLLSQKHSLPRLTVIGGNGTMTSVCGQWLEGVK
RFDARERVISALMERKLFRGKKDHPMSLPICSRSGDVIEPLLKKQWFVRCQEMAKKAVQA
VEEGDLQIIPQFYSKMWKSWLSNISDWCVSRQLWWGHQIPAYRVTLQNSMNTEEEHWVWG
RSAAEAQQRATIKFGVNPEAITLTQDPDVLDTWFSSGLFPFAMLGWPQQTKDLTQFYPNS
ILETGSDLIFFWVARMVMLGTELTGQLPFKQVLFHSLVRDKYGRKMSKSLGNVIDPLDVI
SGVSLERLQEKVKEGNLDPRESIVAIEAQKKDFPKGIPECGTDALRFALCSYRAQGEDIS
LSMSHVLSCRHFCNKMWQTVRFTLATLNDASLPTPLAETYPLSSMDKWICSRLYSTVKEC
EQGFESYELYTVTSALHSFWLHCLCDVYLESIKPLLKPEGCEERVGERQVATSVLYHSVS
VSLALLSPFMPFLTEELWQRLLPYGHFDKTSCSLCVQPYPKTSQLEHWYFPKEEADFSLV
QEVVRVTRLLRAQCQMTKEKPDLYAVCAPDQMEILLRFRSAICTLGRISTLHLHCPEAGF
SDCPSAKASAVGVVDHSLCLHLSAQNGVNADKQRAILCQRREKLAFKLKQALARTQTHSY
IEKVPQKVRQEMENKITAMEQEMKNIEDQLLALKDAK
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcccgtgcatgtggcgtcacccaggatctggagcaagtttggatgcagactc
tgctctgaaaactcatccaacacacagtctttaagtcattcccggacacaagcagaaaaa
gccaaacgcagacaagcccgggaaaaggccattctcagtagtgacgtgaatgatgatgga
ctgagctggtcagataaagaaaaaataaagtacacagctaaactctcacctggagagaag
aaagacaccactctgcccttcccacaatcctacagcccagagtatgtggattttggctgg
tatcagtggtgggagaaacaggaattcttcagtcccgagcagcatagtaaacaaccccat
gcagttaataaacacttttccttgtgtattcctccacccaatgtgactgggactttacat
ctcggacatgcgctgaccgtggcaatagaagatgctttggctcgctggcgacgtatgcag
ggctataaggtgctatgggttccaggctgtgaccatgctgggattgcaacacagtcggtg
gtggaaaggaaactgttgagggaacaagggaaaagcagacaggatttcagcagagaggag
tttctcaaacaggtctggatgtggaaaaatgaaaaaggggatgagatttatcaccagctg
agaaaactgggtgcatctcttgactggagcagagcctgttttaccatggacccggctttc
agcagtgctgtgacggaggcgtttgtcaggctgtgtgattctggactcatctatcgtgct
gaaggtctgatcaactggagctgtacattagagtctgctatctcagatatagaggtggac
tcaaaggagcttcccggcaggactcttctgtctgttcccggctatgagcagaaagtggaa
ttcgggacaatggttacatttgcatatcctttggagggacaggagggagaagttgcagtt
tcaaccactcgtccagagacaatgctgggagatgtggccattgctgttcatcctgatgac
cctcgatataaacatcttcatggcaaacgctgcaggcatcctttcactgagcggttatta
cccattgtgactgacactacggtggatatgacatttggcacaggtgctgttaaactgact
ccagctcatgaccacactgacttcctactctctcagaagcattcgctccctcgcctcact
gtgattggaggaaacggaaccatgacatcagtttgtggccaatggctagagggtgttaag
cgttttgatgccagagaacgagtaatctctgctctgatggagaggaagcttttcagagga
aagaaggatcatccaatgtcattaccaatctgcagccgttctggagatgtcatcgaaccc
ttgctgaagaaacagtggtttgtgcgctgtcaggaaatggccaaaaaagcagttcaggca
gtggaagaaggagatctgcagattattcctcagttttattcaaaaatgtggaagagctgg
ttgtccaacatcagtgactggtgtgtttccagacagctttggtggggtcatcagatacca
gcctatagagtgacactgcaaaactcgatgaacacagaagaggagcattgggtttggggc
agaagtgctgcagaggctcaacagcgtgccactataaagtttggagtgaatcctgaggcc
atcacactcacacaggacccagatgtgctggacacttggttctcttctggtctcttccca
tttgccatgctcggctggcctcagcagactaaagacctgacacaattctaccccaattcc
atcctggaaacaggcagcgacctcatctttttctgggtggccaggatggtgatgctgggc
acagagttgacaggacagctgccctttaaacaggtgctctttcactctctggtgagggat
aaatacgggcggaagatgagtaaatctttaggaaatgtcatcgatcctcttgatgtcatc
tcaggggtgtctttggagagacttcaagagaaagttaaagaaggaaacttggacccgaga
gagagcattgttgccattgaagcacagaagaaagatttccccaaagggatccccgagtgc
ggtacagacgctttgaggtttgcgctttgctcttatagagctcaaggagaggacatcagt
ctgtccatgtcccatgtgctgagctgcagacatttctgtaataagatgtggcagacggtt
cgcttcaccctcgccacactgaatgatgcaagtttaccaacaccattagctgagacatat
cctctatccagtatggacaagtggatatgttcccgtctttacagcacggttaaggagtgt
gagcagggttttgagagctatgagctacacacggtcacgtccgcgctgcactctttctgg
ctccactgtctgtgtgacgtctacctggaaagcatcaagccactgctgaagcctgaaggc
tgtgaagagagagtcggagagaggcaggtggccacatctgtgttgtatcacagcgtgtct
gtatctctggctctcctctcgccctttatgccgttcctcacagaggagctgtggcagaga
ctcctgccgtatggtcactttgacaagacatcctgcagtttgtgtgttcatccctaccca
aagacctcacagctggagcactggtattttcccaaggaggaagcagacttctctctggta
caggaagtggtcagagtgacgaggttactgagagcccagtgccagatgacgaaggaaaaa
ccagacttgtacgcagtgtgtgctccagatcagatggagattctcctgtgcttcagatct
gcgatttgcactctgggtcgaatctcgactcttcatctgcactgtccagaggcaggattc
agcgactgtcctccagctaaagccagcgctgtaggggtggtggatcattccctctgctta
catcttagtgctcagaacggtgttaatgctgacaaacagagagcgattctatgtcagcgc
agagaaaagctggcgttcaaattaaaacaagccctcgctcgcacacagacgcacagctac
atcgaaaaagtacctcagaaagtcagacaagagatggagaataagatcacagccatggag
caggaaatgaagaacatcgaggaccaacttttggctttgaaggatgcaaaataa
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