Danio rerio (zebrafish): 100216326
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Entry
100216326 CDS
T01004
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a precursor
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100216326 (frem1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
dre04091
]
100216326 (frem1a)
Lectins [BR:
dre04091
]
C-Type lectins
Lecticans
100216326 (frem1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Calx-beta
Big_9
UL45
Motif
Other DBs
NCBI-GeneID:
100216326
NCBI-ProteinID:
NP_001177237
ZFIN:
ZDB-GENE-081119-1
Ensembl:
ENSDARG00000069473
UniProt:
A0A8M1NUJ1
D7PS89
LinkDB
All DBs
Position
7:69653925..69729187
Genome browser
AA seq
2167 aa
AA seq
DB search
MTVKTSKCVCLLLLGLIQLIRGSLVKTNAVLKVKRGQSVFLQEDDLQFRIPRVKDSCKLE
VVLNEPITQRVGSLTPQVFDCHFMADEVKYTHNGCPILKEDTVKLRLYRFTETETYSELF
SLRVEILEPECNVIQFGSQQLVVPEFYGLSNVLDGNVVSFNYEHRHNIECTIRVTGLETH
LPVHGQLVTGEPEKADGPRGDEPDSFVSLRRQLDNKARAHCKTDDCLKGLKLLKITKVPC
NDFLMMGIRYQHTDPPSPHTDYISIRLDLTDTRSRSIIQSEQAWIPVTITGALPNQPPKP
AFMSMFILEVDQFILTPLSTATVDAEDDETPKQRLVFNITKPPSEGFITHLSDHTKPVSS
FSWTDLNGMLISFQPPNSSATHRRNYEVEFEVHDFYFEKSQPVTVHVSIRTADTNAPRVS
WNMGLSLLEGQSRPITWDQLQIVDNDNLKAVKIITVDGLQHGRLTVRGGKGFMFTVNDIK
SGVVHYHHDDSDTTKDYIVFRITDGLHQTRHKFPINILPKDDSPPFLITNMLLELSEGQT
ALLRGSILQACDMDSSDDYIMFNVTRAPQAGEIMKMPGPGITGYPVNRFLQKDLFHSIIY
YRHSGREVFDDSFEVVLSDFHDPPNLSEPQVIVIQIQPVPDQPPQEAPGVSRHLVINETD
VVYLTKQQLHFVDLESPDSELTYTVTTPPFYTTTYGGSDAGRLFLVDSIPKFSKDSSAPM
LRLFTQHAVNYMKVAYMPPIPDIGPYPQHIQFVLSVTNQQGSTTTGICFNVTVLPVDNQA
PEVQVKLLVVDEGGEIWVTEDHMHLSDRDSLQDSIHVELKTAPQHGSVYLDGKLMVPGQT
FTVRDLKSLKVRYRHDSSETERDEIKFIATDGTNTADFILRIKVTLVNDEVPVLVAGLKP
MLWCAEGQEVFITIEYICATDPDSDDRSLMYMIARQPYHGVVQRNGIIVDRFIQADLNAG
FISYRHTGQEIGLRPRHDVVTFVISDGETEPISPCCSERDTLFNPQNSLPVYDLNITVYP
VNNQPPSIATGEVFMVDEGGSASITVTHLTVVDQDSAPEDLQLILVSPPHFGYIENILPS
PGFEKSNVGISIASFTYRDVLDGHINYVQSRHQRMEPTTDQLMLQVSDGKQQSSPVPLYI
IISPTNDEIPDFQTQNITVFEGDRTELNSSVISAVDLDVPQERLMFSIVQNPQHGSIISL
PHRNQVSHYKRGAEEPVQHFCMDDLKSGMTLMYVHDDSESEQDEFILQLSDGKHKLQKHV
QVKILPVNDEEPQIIRNTGIEMEAGESRLISSAVLSAHDEDTPPDHILYVFESLPTHGAI
QMKVGSDWLSVSAGVNCSQKVLDMNLLRYLHTAHPGEPTADFFVFHLFDGKNRSPPQHFH
ITVKQLEKGDIALFLKPVRVSRGDRVVFTTDVLLSVDGADQPEELLYVITAPPAHGHVEL
IKHSGVQIQSFSQLDIAANLVCYVHDNRATAPRESLQFMVSNGISTRNGTLEILVDLTDK
VLPTLVHNSGLRVPQGSTVVLSTAVLSLSDPDSPASTLSYRLIQTPQYGQLLLKGQALVA
GAHFTQQDLQDLDVTYKHSGGASQIDRFTFTASDSTDRGFLLDGRVQTEPVFFTLQIEAL
DSSAPQVAVLETLWKVELLKDGRYGIFISSRELKAEDTNTADADLTFHILRAPYIGYLEN
HTSGEFVRQRFSQMDLNRRNILYVINSALDALSDSLEFAVSDALGNTGLSHKLNFSWAGV
ELTRTQYTVCESQGSVSLTIQRKGNMQDSSYVTVQVKELTASAGKDFIPASSLIQFDPGV
ASRVWKVEIVQDSLEEADEKFEVSLASPVAAVLKDNSRATISIKDSNGQCVERQITAGSS
LQGREVRPGPYPQHGSIQLETLPLSPEGVIRGDGDTTDQAPAAPKKRLRVTGNGKVVQPS
ETIRRGSELIYKYHGLVSMAVEEDESASRTDRQAEVQVNSRGQQQRLLTVQTKPQQTSRH
TSSRLLQRTHTQTSSKRCSPDLSGLLHYNQSSGRLFRCNGDSWRPWTPTNETVKAQRCPQ
GWTYHSNNCYLLSSERKASWSTAARACRERFSGHLVSVQSKAHMAWLWDFSQRKPFWIGL
HDGESRGRWEWMDGQSVTYTNWRRNPPKNQKKKETRRCVLVWKKSRWQIRDCQRGKGHRY
VCYTQLH
NT seq
6504 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaaaaccagcaaatgtgtgtgtctcctcttgctgggcctgatccagctgatt
cgaggctctctggtcaaaaccaacgctgtcctgaaggtgaaaagaggtcagtcggtgttt
ctgcaggaggacgatctgcagtttcgtattcccagagtcaaggattcctgcaagctggag
gtggtgctgaatgaaccgatcacacagcgggtcggctctctgacgccacaggtttttgac
tgtcactttatggctgatgaggtgaaatacactcataatggatgtccaattttaaaagag
gacactgttaaacttcgtctttacagatttacagagacggagacgtacagcgagctcttc
tctctccgtgttgaaatcctggagcctgaatgtaatgtgattcagttcggatcacagcaa
ctcgtggtgcctgagttttacggcctctcgaacgtcctggatggaaacgtcgtgtccttc
aattatgaacacagacacaatattgagtgcacaattcgggtgacgggtctggagacgcat
ttacctgttcacggtcagctggtgactggagaaccagagaaagcagacgggcccagagga
gatgaacccgacagcttcgtttctcttaggagacagctggataataaagccagagctcac
tgtaagactgatgactgcctgaagggtctcaaactgctgaaaatcaccaaagtgccatgc
aatgacttcctgatgatgggcatccgctaccagcacaccgaccctccgtctccacataca
gactacatctccatcagactggacctcacagacacccggagcaggagcataatacagtca
gagcaggcctggatcccggtgaccattacaggcgctctccccaaccagccgcccaaacct
gccttcatgtccatgttcatcctggaggtggatcagttcatcctgactcctctctccact
gcgactgtggacgcggaggacgacgagacgcccaagcagaggctggtgttcaacatcact
aaaccccccagtgaaggcttcattactcacctgtcggaccacaccaaaccagtgtcctcc
ttcagctggacggatctgaatggcatgctgatcagcttccagcctcccaactccagcgcc
acacatcgcaggaactacgaggtggagtttgaagtgcatgatttctactttgagaaaagc
cagcctgtgacggttcacgtgtccatcaggacagcggataccaatgcaccaagagtctcc
tggaatatgggtctcagtctgttggaaggtcagtctcgcccaatcacatgggatcagctg
cagattgttgacaacgacaacctgaaggctgtgaagatcatcactgtggacggcctgcag
cacggcagactcactgttagaggtggaaaaggcttcatgttcactgtgaacgatattaaa
agcggcgtcgtgcattaccaccatgatgacagcgacactactaaagattatatagtcttc
cggatcaccgacggcttacatcaaactagacacaagtttcccatcaacatcctgcccaaa
gatgacagtccgccgttcctcattaccaacatgctgctggagctttctgaaggccagacg
gctctgctgagaggatccatcctgcaggcctgcgacatggactccagtgacgactacatc
atgttcaacgtcactagagctccacaggctggagaaatcatgaagatgccaggtcctggg
atcactggataccctgtgaaccgttttcttcagaaagaccttttccattccatcatctat
tatcggcactcaggcagagaggtgtttgacgactcttttgaggtggtgctgtctgacttt
catgaccctcctaacctttcagagcctcaggtcattgtgattcagatccagccagtgcct
gatcagcctccacaagaagctccgggtgtatcgagacacttagtcatcaatgagactgat
gttgtctatttgaccaagcaacaactgcactttgtagatttggagtccccagatagtgag
cttacatacaccgtcaccaccccacctttctacaccaccacctatggagggtctgatgca
ggaaggttgtttctggtcgacagcatccccaaatttagcaaagactcaagcgcaccgatg
ctgaggcttttcactcagcacgcagtcaactacatgaaagtagcttacatgccccccatc
ccggacatcggaccgtaccctcagcacatccagtttgtcctgtcagtgaccaaccagcaa
ggcagcacgaccaccgggatctgctttaacgtaactgttctgccagtggataaccaggca
ccagaggtgcaagtgaagctgctggtagtggatgaaggaggtgagatctgggtgactgaa
gaccacatgcatctctctgaccgggactcactgcaggactcaatacacgtggagctgaag
actgcacctcaacatggcagtgtttatctggacggcaaactcatggttccaggccagact
ttcactgtgagggatctgaaaagcctaaaagtgagatatcgtcacgacagttctgagaca
gaacgtgatgaaattaaattcattgctacggatggcacaaatacagcagatttcatattg
cgcatcaaggtgacgctggtcaacgacgaggtgccagttttagtggcaggactgaaaccc
atgttgtggtgtgcagagggtcaagaagtgtttattaccatcgagtacatctgtgccaca
gatccagacagcgatgatcgatctctcatgtatatgatcgctcgacagccgtatcatgga
gtcgttcagagaaacggcatcattgtagaccgcttcattcaagcagatctaaacgctggt
ttcatttcatacagacacacagggcaagagattgggcttcgtccacgtcatgacgtcgtc
acctttgtgatctctgatggagaaacggagccaatttctccatgctgcagtgaaagagac
acattattcaacccacaaaactctctgcctgtttatgaccttaatatcaccgtctatcct
gtcaacaaccagccaccatcgattgctacaggtgaggtgtttatggtggatgagggtgga
tcagcctccatcactgtgacccatctgactgttgtagaccaggactctgcgcctgaggat
ctccagctcatcctggtttctcctccacactttggctacattgaaaacatcctgcccagt
ccaggatttgaaaagagcaacgtgggaatcagtattgcctcgttcacctacagggatgtg
ttggatggacacattaactatgtccagtccagacaccagaggatggagcccaccactgac
cagctcatgctgcaggtgtctgatgggaaacagcagtcatctccagtcccgctttacatc
atcatcagtccaactaatgacgagattccagacttccagactcaaaacatcacggttttt
gaaggagacaggacagagttaaactcgtctgtaatcagtgcggtggatttggatgttccc
caagagcgtctgatgttcagcatcgtccagaatcctcagcacggctctatcatcagtctg
ccacacagaaatcaagtctcacattacaagcgtggagctgaggagcctgtccagcatttt
tgcatggatgacctcaagagcggcatgactctgatgtatgtacacgatgactctgagagt
gagcaggatgaattcatccttcagctctctgatggaaaacacaagctccagaaacacgtg
caggtgaaaatactgcctgtcaacgacgaggagccgcaaatcatccggaacactgggatt
gagatggaggctggagagtccaggctgatctccagtgctgttctcagcgctcatgatgaa
gatactcctcctgaccacatcctctatgtgttcgagagcttaccgactcatggcgccatt
cagatgaaggtgggctcagactggctgtctgtgtctgcaggagtgaactgctctcagaag
gtgctggatatgaatctgttgcgttaccttcacaccgctcatcccggagaacccactgcc
gatttctttgtcttccacctgtttgatgggaagaaccgctctcctcctcagcacttccac
attacagtcaaacagctagaaaaaggagatatagcgctgttcctgaagcctgtgcgggtc
agtcgtggagatcgtgtggtttttactacagacgtcctgctgtctgtggatggtgctgac
cagccggaggagctgctatatgtgatcactgcacctccagctcatggacacgtggagctt
atcaaacacagcggagtgcagattcagtccttcagtcagctggacatcgcagcaaacctg
gtgtgttacgtccatgataacagagccacggcacccagagagagcctgcagttcatggtc
agcaatgggatatcaactcgcaacgggaccctggagatcttagtggacctgacggataaa
gttctccccacactagtgcacaacagcggcctgcgggttcctcagggctccacggttgtt
ttatccactgctgttttatccctgtctgaccccgacagtccagcgtccaccctgagctac
aggctgattcagacccctcagtacggacagttgctcctgaaggggcaggcgctggttgct
ggagctcatttcacccagcaggacctgcaggatctggacgtcacctacaaacactctgga
ggagcttctcagatagaccgcttcactttcacagcctcagacagcacagatagaggattc
ctgctggacgggagagtgcagacagagcccgtcttcttcacactgcagattgaagctctg
gacagctccgctccacaggtggcagtgctggaaaccctgtggaaagtggagctcctgaaa
gatggccgctacgggatcttcatttcctccagggagctgaaggctgaagatacaaacact
gcagatgcagatctgacctttcacatcctcagagctccatacatcggctatctggagaac
cacaccagcggtgagtttgtgaggcagcgtttctctcagatggatctgaacagaaggaat
attctctacgtcataaactccgctctggacgctttatctgacagtctagagtttgccgtg
tctgacgcactgggcaacaccggactctctcacaaattgaacttcagctgggccggtgtt
gagctgaccaggactcagtatacagtatgtgaaagtcaaggctcagtttcactaaccatc
cagaggaaaggaaacatgcaggactcctcttatgtgaccgtacaggtgaaagagctcacc
gcatctgctgggaaagactttataccagcttcatctctgattcagtttgacccaggggtg
gccagtcgagtttggaaagtggagattgttcaggactcattggaggaagcggatgagaaa
tttgaggttagcttggcgtctcctgtagctgcggtgctgaaggacaattcaagagccaca
atctccattaaagactcaaatgggcagtgtgtggagcggcagatcacagcgggcagcagt
cttcagggtcgtgaggttcgtccaggaccgtatcctcaacacggctccatccagctggag
actttaccgctctctcctgagggagtcatcagaggtgatggagatacaacagatcaagct
cctgctgctcccaagaaaagactccgagtcactgggaatgggaaagtagttcagccttct
gaaaccatccgtcgtggatctgagctcatttataaatatcatggtttggtgtcgatggcg
gtggaggaggatgaatcggcctccaggactgacagacaggcagaggttcaggtcaacagc
agggggcagcagcagcgtcttcttactgtccagactaaaccacagcaaacctccaggcac
accagcagcagactcctgcagcgcacacacactcagacgtcctccaagcgctgttctcca
gatctctcaggtctcctgcattataaccagagctctggtcggctgtttcgctgtaatgga
gactcatggaggccctggacccccactaatgagactgtgaaagcgcagagatgtcctcag
ggatggacgtaccacagtaataactgttatttactgagctcagagcgtaaagcctcatgg
agtactgcagcgcgggcctgcagagagaggttcagtggtcatctggtcagtgttcagtct
aaagcacacatggcctggctgtgggacttcagtcagaggaaacccttttggatcggtctg
catgatggagaaagcagaggccgatgggagtggatggacggacaatcggtcacgtacacc
aactggagacgaaacccgccaaaaaaccagaagaagaaggagacgaggaggtgcgtcctg
gtgtggaagaagagtcgatggcagatccgagactgtcagagaggaaaaggacaccgctat
gtgtgttacactcaactccactga
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integrated database retrieval system
