Danio rerio (zebrafish): 100294690
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Entry
100294690 CDS
T01004
Symbol
col28a2a
Name
(RefSeq) collagen, type XXVIII, alpha 2a precursor
KO
K23619
collagen type XXVIII alpha
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dre01002
]
100294690 (col28a2a)
Peptidases and inhibitors [BR:
dre01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
100294690 (col28a2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
100294690
NCBI-ProteinID:
NP_001153314
ZFIN:
ZDB-GENE-030131-4444
Ensembl:
ENSDARG00000076321
UniProt:
F1QAB3
LinkDB
All DBs
Position
9:complement(48298473..48370606)
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AA seq
1208 aa
AA seq
DB search
MAVMAHSLSWCVLCLGLLSVCAQDFYEERTGPTRVKTRGPTASNLQKHNGDAILDEDCSL
ELAFLLDSSETAKDNHQQEKKFTMDIIEGLQSIRLDTGRKLSWRAALLQYSSHVIIEQTL
KQWKGTENFKSSIAPMAYIGHGTYTTYAITNMTKIFVEESSPERIKIALLLTDGFFHPRN
PDIFSAMADAKNQGVKVFTIGITRTANDPVNAANLRLLSSTPASRFLYNLQDTNVMEKVI
TQIAQLANDGCPLSQKCVCEKGERGPSGPAGKKGRPGEDGTPGAKGQKGEAGLSGLPGRE
GTEGKPGYKGEQGERGECGTPGIKGDRGPEGPVGTQGSRGLQGLPGPQGDIGPEGAQGKK
GERGPAGLPGIQGDSGIGLPGPKGDMGFQGRPGPPGPIGIGEPGLPGPQGPQGVQGEKGP
QGEGFPGPKGDRGLEGPKGPRGQPGLGLKGDKGEFGPPGLPGPVGLTGVGIQGEKGVEGP
RGPPGGRGPPGEGFAGPKGEQGLPGEMGTPGERGQGEPGAKGEPGSSGLAGVPGLPGEDG
APGQKGEPGIPGFRGPEGAQGIGTQGEKGDQGQRGIRGLPGPPGISGPSGAKGEPGTPGR
LGMPGLPGRALAGPKGDLGPAGPPGPIGETGYGLPGPKGDRGNPGPHGPSGPKGDGFPGP
VGLPGLPGLPGEPGPEGVGVPGPKGDVGFRGLPGLPGPPGEGLQGKQGNIGRPGPPGPHG
PPGEGIQGPKGDQGAPGVTGPRGPSGEGLPGAKGDRGLQGERGFKGGKGDMGDPGTPGLA
GRQGLKGEQGLTREDIIKLIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIKDFVI
ALVDRVTVGRNATRIGLLLYSLEVHLEFNLARYMTKQDVKKAVRNMPYMGEGTYTGTAIR
KATQEAFFSARNGVRKVAIVITDGQTDKREPVKLDIAVREAQVANIEMYALGIVNTSDPT
QAEFLRELNLIASDPDSEHMFLIDDYNTLPALESKLVSQFCEDENGALYFNRITNGLNGN
NGFGYSNGQEDISSYGNTVYGSRFQESLDRSQSHTRGRGHSIPLPISPGPLKPQVENDSD
GEDLDIKTQTKSGGTVVVVNKTVQPAQPGTSSSSSSTVSLSSSVSTHSTSVNVDTKPRPV
VIKESAPLDPRCQLSFVQGSCRNYVIRWYYEKQSNSCAQFWYGGCDGNDNRFHTEEECKT
TCVLSSTV
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcatggctcactcattgagctggtgtgtgttgtgtttgggtttgttgagtgtc
tgcgctcaggacttctatgaggaaagaactgggccaacaagagttaaaaccagaggacca
acagcatccaatttacagaaacacaatggagacgccatcttggacgaggactgcagcctt
gagttggcttttctcttggacagctccgagacggccaaggacaaccatcagcaggagaaa
aagttcacgatggacattatagaaggcctccagagcatccgcttggacacaggccgcaaa
ctcagctggagagcggccctgctccagtacagcagtcacgtcatcatcgagcaaacccta
aaacagtggaaaggcactgagaacttcaagagcagcatcgcaccgatggcttacatcggc
catggcacttacacaacctacgccatcaccaacatgaccaagatatttgtggaagaatcc
agcccggaacgaatcaagatcgccctgctcctcacagatggcttctttcatcccagaaac
cctgatatcttctctgccatggcggatgcaaagaaccagggcgtgaaggtgttcacgatt
ggtatcactcgtactgccaacgaccctgtgaacgctgcaaacctgaggctgctgtccagt
acaccggcctccagattcctctataatctacaagacacaaacgtcatggaaaaagtcatt
actcagattgctcagctggcaaacgatgggtgtcctctgtctcagaagtgtgtatgtgag
aagggcgagcgaggacccagtggcccagcgggaaagaagggtcgtccaggtgaggacgga
actcctggggccaaaggccaaaagggtgaagctggtttaagtggacttcctggtcgagag
ggtacagaggggaaaccaggctacaaaggagagcagggggaaagaggagaatgtgggact
ccaggaatcaaaggagaccgaggtcctgaaggtccagttggcactcaagggtccagaggt
ctgcagggtttaccaggaccacagggtgacatcggtccggagggcgcacagggaaaaaag
ggtgagcgtggtcctgctggcctgccgggaattcagggcgacagtggaataggacttcct
ggaccaaagggagatatgggatttcagggaaggccgggtcctccgggtcctattggcata
ggcgaaccaggtctacctgggccacaaggtccacagggggttcaaggtgaaaaaggacca
caaggagagggttttccaggcccaaagggggaccgcggtctggaggggccaaaggggccg
aggggacagccgggcctgggactcaaaggcgataagggtgagttcgggcctccgggtttg
ccaggaccagttggactcacaggggttggcattcagggagaaaagggtgttgagggtccg
agagggcctccaggtggtagaggaccaccaggagagggcttcgctgggcctaagggagaa
caaggtttgccaggagagatgggtacgccgggagagagaggacagggcgagcctggagca
aagggtgagcctggctcatctggattggctggagtacctggacttcctggagaagatgga
gctcccggacaaaagggtgagcctgggataccaggtttcaggggacctgaaggggctcaa
ggaattggcactcaaggagagaagggagaccagggtcagcgtggcattcgagggttgcca
ggtcctcctgggataagcggcccttcaggggcaaagggggaaccaggtacaccaggaagg
ctgggcatgccaggattacctggaagagctcttgcaggaccaaagggtgacttgggtcct
gctggacctccaggaccgattggagagaccggttatggcctgcctggtccaaagggtgat
cggggtaacccaggcccacacggaccatcagggcctaaaggtgatggattccctggtcca
gtgggtctgcctggtttaccgggcctaccaggagagcccggacccgaaggcgttggtgtt
cctggacccaagggagatgttgggttcaggggcttgcctggtttgcctggaccaccaggt
gaaggactgcagggaaagcaaggcaacataggaagaccaggtcctccagggccacacggg
cccccaggggaaggtattcagggacccaaaggggatcaaggagctccaggagtgacagga
ccgaggggcccttcaggagagggacttccaggagccaagggggatcgtggtctgcagggc
gagagggggtttaaaggagggaaaggtgacatgggagatccaggcactccaggacttgct
ggaagacaaggactcaagggtgaacaagggctcacgagggaagacataatcaaactgatt
aaggagatttgtgggtgtggaattaagtgcaaggaaaggcctatggagctggtgtttgtg
atcgatagctctgaaagcgtgggtcctgaaaacttcgagatcatcaaagacttcgtcata
gctttggtggatcgcgtgacggtgggccgtaatgccacaagaatcggtctgctcctttac
agtttggaagttcatctagagtttaacttagccaggtatatgaccaaacaagatgtgaaa
aaggccgtcaggaacatgccatatatgggggagggcacttacactggcactgccatccga
aaagccacgcaagaggcctttttcagtgccaggaacggcgtcagaaaagtagccattgtc
attacagacgggcaaacggataaaagagagccggtgaagctggatattgcagttcgtgag
gctcaggtggcaaatattgagatgtatgcactgggtatcgtgaacacatctgacccgacg
caggccgagtttctgagagagctcaatctcatcgcttcagacccggatagtgaacacatg
ttcctcattgatgactacaacacactgccagctctggagtctaaactagttagccagttc
tgtgaggatgagaacggagccctttactttaaccggatcaccaacggcttaaacggaaac
aatggatttggctacagtaatggtcaagaggacatttcctcatacggcaacaccgtttat
ggaagcagatttcaggagtcactagacagatcgcagagtcacaccagaggcagaggacac
agtataccattacccatcagccccgggcctctcaaaccacaggtggagaatgactctgac
ggagaggatctggatataaaaacacaaactaaaagtggaggaacggttgtggttgtcaat
aaaacagtccaacctgcacagcctggcacatcatcatcatcatcttcaacagtctcactt
tcttcctcagtatcaacgcattctacttcagtgaatgtggacacgaagcctcgtcctgta
gtgataaaagaatcggctcccctggatcctcgctgtcagctcagttttgttcagggctcc
tgtagaaattacgtcattcgctggtactatgagaaacagtcaaactcttgcgctcagttc
tggtatggaggctgtgatggaaatgacaatcgtttccatacagaagaagaatgcaagacg
acgtgtgtcctcagcagcacagtataa
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