Danio rerio (zebrafish): 100317962
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Entry
100317962 CDS
T01004
Symbol
ppfibp2a
Name
(RefSeq) liprin-beta-2 isoform X2
KO
K27096
liprin-beta
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
100317962 (ppfibp2a)
Membrane trafficking [BR:
dre04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100317962 (ppfibp2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
FxsA
Motif
Other DBs
NCBI-GeneID:
100317962
NCBI-ProteinID:
XP_005159254
ZFIN:
ZDB-GENE-070705-277
Ensembl:
ENSDARG00000061977
UniProt:
F1QBQ0
LinkDB
All DBs
Position
18:29145868..29192049
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AA seq
826 aa
AA seq
DB search
MEGDVDFYKHFAWLKKVNVHSACNGETYQERLSRLEGDKESLVLQVSVLTDQVEAQGAKI
RDLENSLGEYQHKLNSTEEMLQQEFFSRSSLESQKLGLMEEVSCLKLKLGDMEDKHINCA
ERQHKAESVVNLISELQEQMCRIRQEISSKNPEKPAEMIPEEGYGSEPAQASQTEPKPTN
LLQELKILKHRVEELEQEKTHYEQKLKVTQAEIMTLQQLLNCKNSEIENLQAQLLSRAPV
SVDSAEREEIYRRRLNTKHQELQRLKTGMESLIAANDEKDRQIEELTLLLSQFKQMNEIM
TLVQGTEDKSIQIRSEDEKQNGAVKMKTLIQKAHPELTFSSSTPLLFSSVSSQKDANSRS
NSIEDFNGSSTPKTGQADNKHQTLPAVTLPEKREGETSDTSGKKSPENKDEDINIKTMKD
TTNSDLSSVSSGAESGQQSPVSQENVKNTSIRKLWGKMKRTGVLSDDLEPTQFKRGGFRA
TAGPRLIRTPDSGRSSRSQTPFCKWTTEQVCGWMEECGLGQYVSLARQWVDSGQTLLSAT
PQELEKEICIKHPLHRKKLQLALRAFSNKTMEKSSELDHIWVTRWLDDIGLPQYKDQFYE
SKVDGRMLQYLTVNDLLFLKVTSQLHHLSIKCAIHVLHVNKFNPNCLRRRPGDEFKTSPS
EVVQWSNHRVMEWLRSVDLAEYAPNLRGSGVHGGLIILEPRFHSETLALLLNIPPQKTLL
RRHLATNFYTLVGLQAQQEKREFANASGHAPLTTTAKVRPKKLGFTHFRQLRKLKMDESA
DYICPMDTGTSPVLNGTPKKHYASFRGISPILARESDRLEQVGSKG
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggacgttgatttttacaaacattttgcatggttaaaaaaggtcaacgtgcac
agcgcatgcaacggtgagacctaccaggagcgactgtctcgtctagaaggagataaagag
tcacttgtgttacaggtcagtgttttgacggatcaggtggaggctcagggagcgaagata
agagacctggagaattctcttggggaatatcagcacaagctgaactccactgaggagatg
cttcaacaggagtttttcagcagaagttctctagagtcacagaagctggggttgatggag
gaagtgtcctgtctgaaactgaagctgggggacatggaggacaaacacatcaactgtgcc
gagagacaacataaagctgagagtgtagtgaatctgattagtgagctccaggagcagatg
tgtaggattcgtcaggagatctcaagtaaaaacccagagaagccagcagagatgatccca
gaggagggctatggcagtgagccagcacaagcttctcagactgaaccaaagccgacgaac
ttgctccaagagctcaaaattctcaagcatcgagttgaggagctggagcaggaaaaaacc
cattacgaacagaagctcaaggtgacacaggcagagattatgactttacagcagctattg
aactgcaaaaactctgaaatagagaatctacaggctcagctgctctccagagctccagta
tctgtggacagtgctgaaagagaggagatttacagaaggagactcaacaccaaacatcaa
gagttacaaaggttaaagacaggaatggaatcacttattgctgccaatgatgaaaaggat
cgtcagattgaagagcttactctcctcctcagtcagttcaaacagatgaatgaaatcatg
actttagttcaaggtacagaagacaaatctattcaaatcagaagtgaggatgaaaagcag
aacggggctgtgaaaatgaagacgttaatacaaaaagctcatcctgagctgaccttcagc
agctcaactcctctactattttcttcagtttcttcccagaaagatgcaaactccaggtct
aatagtatagaagactttaatggcagttcaactccaaagactggacaagctgataacaaa
catcagacgctcccagctgtgactctcccagagaagagagagggtgagacgagtgacaca
tcaggcaaaaagtctccagagaataaggatgaagacatcaacattaaaacaatgaaggac
acaaccaattctgatctttcttcagtatcgtctggggctgaatcaggccagcagtctcct
gtctcacaggaaaatgtcaaaaacaccagcatacgcaaattgtggggaaagatgaagagg
acaggtgtgctgtcagatgacttggagcccacacagtttaagagaggggggttcagggct
acagctggacctcggctaatacgaacacctgattctggacgctcatctcgttcacaaaca
cccttctgtaagtggacaacagagcaagtgtgtggctggatggaggagtgtggtttgggt
cagtatgtcagtttggcccgccagtgggtggatagtggacaaaccctcctctctgcaact
ccacaggaacttgagaaggagatttgtattaaacatcctctgcacagaaagaaattgcaa
ctagctctcagagcattcagtaacaagacaatggagaaatcttccgaactggatcatatc
tgggttacacgttggcttgatgacattggtttaccacagtacaaagatcagttttatgaa
agtaaggttgatgggcgcatgctacagtacctaacagtgaatgacctcttgtttctgaaa
gtcaccagtcagcttcatcatctgagcattaaatgtgcaatccatgtccttcatgttaac
aagtttaacccaaactgcttgagacggaggccaggagatgagttcaagacgtctccttct
gaggtggtgcagtggtccaaccaccgtgtgatggagtggttgaggtcggtggatctggct
gaatatgctccaaacctgagaggcagtggtgttcatggaggcctaattatcctagaacct
cgttttcattcagagaccctggcgttgttgcttaacatccctccacagaaaactctcctg
agacgacacctggccaccaatttctacacactggttgggctccaggcacagcaggagaaa
cgagagtttgccaatgccagtggccatgctccccttaccaccactgcgaaagtcaggcca
aagaagcttggttttactcacttcagacagttgagaaagctcaagatggatgaatcagca
gattatatatgccccatggatacagggacctcaccagtgctaaatggaacaccaaagaaa
cattatgcaagcttcagggggatcagccccatcctagccagagaatcagacagactggag
caggttgggtctaagggctga
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