KEGG   Danio rerio (zebrafish): 100330060
Entry
100330060         CDS       T01004                                 
Symbol
jmjd8
Name
(RefSeq) JmjC domain-containing protein 8
  KO
K25792  jumonji domain-containing protein 8
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dre03400]
    100330060 (jmjd8)
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     100330060 (jmjd8)
SSDB
Motif
Pfam: Cupin_8 JmjC_2 JmjC Cupin_2 Cupin_1
Other DBs
NCBI-GeneID: 100330060
NCBI-ProteinID: XP_073800291
ZFIN: ZDB-GENE-120917-1
LinkDB
Position
3:12045239..12056360
AA seq 267 aa
MDQILRALLLLLIARLPASFQCSGAVSEDGGWGLDSSLQDEGECNIEIRDANSITHTEFI
NEYAYAKPVILRGLTDNTKFRFLCAKSSLLREYGDKTVRLSTANTHSYRKVDVRFEEFVK
FLLTPQSEDTLGSDTLYFFGDNNFTEWRSLFEEYKAPPFSLPLTHPAYSFGIAGPGTGVP
FHWHGPGYSEVIYGRKRWFLYPPDLAPEFHPNHTTLSWVSQSYLDLELHQRPLECTIRPG
EVLYFPDRWWHATLNLDTSVFISTFLG
NT seq 804 nt   +upstreamnt  +downstreamnt
atggatcagattctcagggctctgttactactgctgatagcgcgcttgccggcttcattt
caatgctcaggtgctgtcagcgaagatggaggatggggactggattccagtctgcaagat
gaaggcgaatgcaacattgagatcagagatgcaaactccataacacacacagagtttata
aatgagtatgcttatgcaaaaccagttatactccgagggcttacagacaacacaaaattc
cgcttcctgtgcgccaaatccagtctgttgagagaatatggagataaaacagtccgcctc
agcacagccaatacacactcatacaggaaagtggatgtccggtttgaagaatttgtgaag
ttcctgctgacgcctcagtctgaagacacgctgggcagtgatacgctgtacttctttggg
gacaataacttcactgagtggcgttctctgtttgaggagtataaagcaccacctttttct
cttcctctcacccaccctgcgtacagctttgggattgctggaccaggaactggggtccca
tttcactggcacggccccggatactctgaagtcatctacggcaggaagcgctggtttctt
tacccacctgacttggcacctgagtttcacccaaatcacaccactctctcctgggtctca
cagtcgtacctggacctggagctccaccagcggcctctggagtgcacgatacgacccgga
gaggtgctgtattttcctgaccgctggtggcatgcaactttaaatctggacaccagtgtc
tttatttccacttttctgggatga

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