Danio rerio (zebrafish): 100330212
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Entry
100330212 CDS
T01004
Symbol
lgr6
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 6 precursor
KO
K08399
leucine-rich repeat-containing G protein-coupled receptor 6
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100330212 (lgr6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
dre04030
]
100330212 (lgr6)
G protein-coupled receptors [BR:
dre04030
]
Rhodopsin family
Others
R-spondin
100330212 (lgr6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
7tm_1
LRR_9
LRRNT
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
100330212
NCBI-ProteinID:
NP_001410768
ZFIN:
ZDB-GENE-110411-186
Ensembl:
ENSDARG00000098308
UniProt:
P0DM44
A0AB13A9D9
LinkDB
All DBs
Position
23:complement(5244177..5401301)
Genome browser
AA seq
962 aa
AA seq
DB search
MLVVLLILHAVSCAHSHGSPGAAVPVKQCPSACQCEEDGILLLVDCSEQGLSSVPTDLSP
LTSYLDLSMNNISEIQPNAFRNLHFLSELRLSGNHLRHIPGPMLQGLYNLKVLMLQNNQL
ERLPSEDPWELPNLLSLRLDANLIMEVPARTLSGMRSLRHLWLDDNALTEIPVSALNDLS
SLQAMTLALNRITLIPDYAFRNLSNLVVLHLHNNMIRTLGQNCFEGLHSLETLELNFNDL
QEFPVAIRTLAKLQELGFHNNNIKAIPERAFVGNPLLQTIHFYENPIQFVGRSAFQFLPK
LHTLSLNGATEIREFPDLKGTTSLQVLTLTRAGLTSLPYDLCHLLPKLKVLELSHNVIEE
LPSFYHCTSLQEIGLQHNLIKQIEMNTFQQLGSLRSLDLSWNSINSIHPDAFFSLQSLIK
LDLTGNRLSNLPMTGLTSLTHLKLKGNMALSRSFGLEDFPNIRVIEMPYAYQCCVFGGCS
SYRSASQWEEQMGSEEEDFQKKSPSLFPIHTDNNYDLDLEEFQLAIEESKLQTSIQCTPI
PGPFKPCDNLFDSWVVRLGMWLISLVSLMGNSLLILTVFTSPSYLSPVKFIIGTISGANL
LTGLCTGTLALVDARTFGEFALHGAQWEMGAGCRAVGFLSVLASEGSILFLTLAAVQCSV
SVSCARAYGKSPSLGSVRAAAVACLALSLAVAALPLIGVGEYGATPLCMPSPLPDGEPST
LGFMVALIMMNSLCFLVITGTYIKLYWDLMKGDFDSIWDCAMIKHVAWLIFTNCLLYCPV
AFLTFSSLLSLFPVSEEVVKSVVLVLLPLPASINPLLYLLFNPHFREDMRLLLSRAHLNH
DRNLDSFVSVDTEKSSYDSTQALVSFATEADGVFESLSVPNPETVARFTCPPSVALIPCQ
MQMKPSTDRENTGENLIRSAPGLIAKEQEHIRSSGVDTQNGTSIFSGAYHSTGPSAHSQV
FT
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgttggtggtgttactgatcctgcatgccgtgtcctgtgcccattctcacgggtcgccg
ggtgccgctgtgcctgtgaagcagtgtccgtctgcttgccagtgtgaggaggatggcatc
ctgcttctggtggactgctccgaacaaggactatccagcgtgccaactgatctgagtcct
ttgacgtcttacctggatctcagcatgaacaatatcagcgagattcagcccaacgctttc
cgcaacctgcacttcctcagtgaactaagactctcgggcaaccacctgagacacatccct
ggccccatgctccaaggcctctacaacctcaaagtcctgatgttgcagaataaccagtta
gagcgattgcccagtgaagacccatgggaattacccaatttgctgtctctgcgtctggat
gccaacctgattatggaggtgccggcgaggaccctctcgggtatgcggtccctgcggcac
ttgtggcttgatgataatgccctgacagagatcccagtgagcgccctcaacgacctctcc
tcgctccaagctatgacccttgccctaaaccgcatcaccctcatcccagactatgccttc
aggaacctatcgaatctagttgtcctccatcttcacaacaacatgatccggacccttgga
cagaactgctttgagggactgcacagcctcgagaccctggaattgaactttaatgacctt
caagagttccccgtggccattcgcacactggccaagcttcaggaactgggattccacaac
aataacattaaggccattcctgagagagcgtttgtggggaacccacttctgcagaccatt
catttctatgagaatcccattcagtttgttggcagatcagcatttcagttcttgccaaag
ctgcacacactctctttgaacggggccactgagatccgagagtttccagatctgaaagga
accaccagtctgcaagttcttacactgacccgcgctggattgaccagcctgccatatgat
ctctgccacctgctgccgaaattaaaagtgctggaattgtctcacaatgtcatcgaagag
ctgccaagtttttaccactgcacttctcttcaagagataggcctgcagcacaatctgatc
aaacagattgagatgaacacattccagcagctcggctctctgcgctctctggacctaagc
tggaacagcatcaactctatccaccccgatgcctttttctctcttcagtctctcattaaa
ctagatctcactgggaatcgactgagtaatttgccgatgactggactgacaagtcttact
catctcaaactgaaaggcaacatggcactgtcacgttccttcggattggaggacttcccc
aacataagggtcatcgagatgccatatgcctatcagtgctgtgtttttggaggctgtagc
agttacagatctgccagccagtgggaagaacagatgggcagtgaagaggaagatttccag
aagaaatctccgtccctgttccccatacacactgacaacaactatgaccttgacttagaa
gaattccagttagcgattgaagagtccaagctacagaccagcatacagtgcacccccatc
ccaggtccattcaaaccatgtgataacctgtttgacagttgggtggtacgacttggcatg
tggctcatttctttggtctcgctgatgggaaacagccttctgatcctgacagtcttcaca
tcccccagctatctctctcctgttaagttcatcattggaaccatcagtggtgccaacctg
ctaacaggcctatgcactggaaccttagctttagttgatgcccggacatttggagagttt
gccctgcatggcgctcagtgggaaatgggtgcaggttgccgagcagtaggctttctttca
gtgctggcctcagagggctccatactcttcctgactttggccgcagtgcagtgcagtgtg
tctgtctcatgtgcccgcgcttacggaaagtcaccatctttgggaagtgtccgagccgct
gcagttgcatgcttggcactttcgcttgcagtcgctgctttgccactaattggggtcgga
gagtacggggcaactccactctgcatgccatcacccctaccagatggagaaccttccaca
ctgggattcatggttgctctcataatgatgaactctttgtgtttcctggtgatcactgga
acttacatcaagttgtactgggacctgatgaagggcgactttgacagcatttgggattgt
gccatgattaagcatgtggcctggctcatcttcaccaactgcctgctctactgccccgtt
gccttcctcaccttctcctcccttctaagcctctttccggtaagtgaggaggttgtcaaa
tctgtcgtcctagtgcttttgcctcttccagcaagcatcaaccctttgctgtaccttctc
ttcaatccacacttccgtgaagacatgcgtctccttttgagcagagctcacctcaatcat
gatcgcaacctggattcctttgtctcagttgacacagagaaaagctcctatgactccact
caagccctggtgtcttttgccactgaagcagatggagtgtttgaaagtttgtcagtccca
aaccctgagacagttgcccggtttacatgcccaccctcagtggctctgattccatgccag
atgcagatgaaaccatcaacagacagggagaacactggagagaatctgatcagatcagca
ccaggactcattgccaaagagcaggagcacattagaagcagtggagtggacactcagaat
ggcacctccatcttctctggagcataccactccacaggtccttcagctcattctcaggtc
tttacctaa
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