Danio rerio (zebrafish): 100330371
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Entry
100330371 CDS
T01004
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X3
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
100330371 (sorcs2)
Membrane trafficking [BR:
dre04131
]
Protein recycling
Others
Others
100330371 (sorcs2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
InlK_D3
BNR_6
DUF6786
Motif
Other DBs
NCBI-GeneID:
100330371
NCBI-ProteinID:
XP_002662899
ZFIN:
ZDB-GENE-130530-825
Ensembl:
ENSDARG00000077465
UniProt:
E7FD83
LinkDB
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Position
7:39758699..40057772
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AA seq
1133 aa
AA seq
DB search
MKTLIMAVFAHLYPAVFFACAWMALLGPISCHSSGIIKQRSERDRELDSRGGHVTGTDEA
LISAYSRGDYSGDPGGAAVGVPRVRRASTPEKVSLLSSSFVLKGDATHNQAMVHWTGENS
SVILILTKYYHADSNKVLESSLWRSSDYGSTYTKLNLMPGTTIIVTNFYICPTNKKKVIL
VSSSINERDQMLFISTDEGASFQRQPVSFTVDSLLFHPSEEDKLLAYSKEAKLYISTDLG
HKWTLLQERVTKDRVFWAVTGVDVDPDLVHMEMQDISGGYLYVTCLIQNCSDKMVTAQFL
GKIDHNSLSVQDEYIFVKVTTGNRTKYYVSYRRNEFVQMRFPKYSLPKDVQIVSTDENQV
FLALQEWYQTDTYNLYQSDPQGVYYSIVLENVRSTKQPEENVLIDILEVRGVKGVFLANQ
KVDGKVMTLITYNKGRDWEALAPPATDMNGKPVSCKQPDCHLHLHLRWADNPYVSGTVHT
KDSAPGLIMGAGNLGSQLVEFKEEMYITADCGKTWRQVFEEEHHILYLDHGGVIVAIKDT
SIPLKILKFSIDEGRTWSIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKV
DFRQSFPRQCTEADYDSWKLTDLQGEKCIMGQERVYRRRKETSFCIKGKSYTSALTAKPC
PCSEKDFTCDYGFERAPSLRLEGDRCYPDFWHNPDAPPENCHLGHSYKSSTGYRKVIANV
CEGGLNKEQSAKQHSCPLLPPKGLQLGIKGQMLAVAPGDDITFIVHQEQGDTSSTRYQVD
LMDGVRAIYENLTVTDEPIQHRYEKPGVYRVNVKAENSAGHDQAMLYIQVTAPLQDVHLE
VVPIAGRNQDVNLTAIVLPTEANLTVFYWWIGDNMQPKLTLENSLITRFSEEGEVPVTVQ
ASNGRSMVQDSKTVIVYDHFQIIPLSFSRNLDHFNPNIPEWRRDVGEVVTKIIAKLTGVP
QEHLVTMVKPGLPTSADLYVLPQETTPVKRSVFVDKRVPTIKQVLSENNVSFIVRGGLRV
LVTLADLDSGSGLAAAGPGVWAVAVFLLISLISAAAFILFKFKRKLPGRNVYAQMHNEKE
QEMTSPVNHSEDTQNIIQGEEFIDDDLDSQTLGNHSGVVLSINSRELHSYLTS
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgctcatcatggcagtttttgcgcacctgtacccagctgtgtttttcgcttgc
gcgtggatggcactgttaggaccgatttcatgtcacagcagcggtattataaagcagaga
agcgaacgggaccgggagcttgacagccgcggtgggcatgtcactggcacagatgaagcg
cttatctcagcgtacagccgcggagattacagtggagacccgggcggagcggccgtggga
gttccccgagtccggagggcatcgactccggagaaagtctctctgctcagcagctctttc
gtccttaaaggggatgccacccacaaccaggcaatggtccactggacgggtgaaaacagc
agcgtcatcctcattcttaccaaatattaccatgcagactccaacaaagttctggagagt
tccttgtggagatccagtgattatgggtcaacatacaccaagctcaacttgatgcctggg
acaaccatcatcgtcacaaacttctatatctgccccactaataagaaaaaggtgatcttg
gtgagctccagcatcaatgaacgtgaccagatgcttttcatcagcacagatgaaggtgcg
tccttccagcggcagcccgtctccttcaccgtggactctctcctcttccatccatctgag
gaagacaaacttctggcttacagcaaagaggcgaagctgtatatctccactgatctgggc
cacaaatggactctgcttcaggagcgcgttaccaaagacagagttttctgggccgtgacg
ggggtggatgtggatcctgatttggttcatatggagatgcaagacatcagcggcggatac
ctttatgtcacatgcctcatccaaaattgctctgataaaatggtgactgcgcaattcctg
gggaagattgaccacaattcactctcggtgcaagatgaatacatatttgtgaaggtgact
acaggaaatcggaccaaatattatgtctcataccggaggaatgaatttgttcagatgaga
ttccctaaatattctcttccaaaggatgtgcagattgtgagtacagatgagaatcaggtg
tttctggctcttcaggaatggtatcagacggacacgtacaacctctaccagtctgatcca
cagggagtctattactccattgtgctggagaacgtccgcagcaccaagcagcctgaagag
aatgtgctcatcgacatcctggaggttcgtggagtcaagggcgttttcttagccaatcag
aaagtagatggaaaagtaatgactctcatcacctacaacaaaggcagagactgggaagcg
ctcgctccccctgcaactgatatgaacggcaaacctgtcagctgcaaacagcctgactgt
catcttcatctgcatttgcgatgggccgacaacccgtatgtatctggaacggtccacact
aaggattctgccccaggcctcataatgggtgcaggtaacctcggctctcagctggtggag
tttaaagaggagatgtacatcacggcagactgtggcaagacctggagacaggtttttgaa
gaagagcaccacattctctatctagatcatggtggtgtcattgtggccattaaggacacc
tcgatccctttaaaaatactcaagttcagcatagatgaaggacgaacgtggagcattcat
aactttaccagcacttctgtgtttgtggacggacttctgagtgaacctggagatgagact
ctggttatgacggtgtttggccacataagttaccgttcagattgggagctggtgaaggtg
gattttcggcagtcatttcccagacagtgcacagaagctgattatgactcctggaagctc
actgacctacagggagagaaatgcatcatgggccaagagcgagtttacagaaggaggaaa
gagacatcgttctgcattaaagggaaaagttatacatcagcgctaacagccaaaccttgc
ccctgctcagagaaagacttcacctgtgactatggctttgagcgagctcccagtctcagg
ttagagggggatcgctgttatccggacttctggcataatcctgatgctccacctgaaaac
tgccatttaggacacagctataaatctagcacaggttaccgaaaggtcatcgctaatgtt
tgtgagggtggcttgaataaagaacagagcgcaaagcagcattcctgccctttgctgccc
cctaaaggcctgcagctgggcatcaaaggacagatgctggcagtggctcctggagatgac
atcacctttatcgtccatcaggagcagggtgacaccagcagcaccaggtatcaggtggat
ttaatggacggggtcagggctatatatgagaacctgactgtaacagatgaacccattcag
caccgttatgagaagccaggagtttaccgggtgaatgtgaaggctgaaaactctgccgga
catgaccaagccatgctttatatccaggtcacagctcctctacaggatgttcatctagag
gttgtcccaatcgctggtcgaaatcaagatgtaaatctcacagctatagtgcttcccact
gaggcaaacctgactgtgttttactggtggattggagacaacatgcagccaaagctgacc
ctggagaacagtctgataactaggttttctgaggagggtgaagttcctgtgaccgttcag
gcctctaatggtcgctccatggtccaggacagcaaaactgtcattgtttatgatcatttc
cagatcatcccattgagtttcagtcgtaatttggaccattttaacccaaacatccctgaa
tggagacgagatgtgggggaagtcgtaacaaagattattgctaagctcacaggggttcct
caggagcatctggtgacgatggtgaagcctgggcttcccacctctgcagacttgtatgtt
cttcctcaagagaccacaccagtaaagaggagtgtgtttgttgacaagcgtgttcccacc
atcaaacaggttctgagtgagaacaatgtgagcttcattgtgagaggagggttaagagtt
ttggtgactctggcagatttggattcaggttctggtttggctgctgcaggtcctggtgtt
tgggctgtagctgtctttcttctcataagtttgatctccgctgcagcgttcatactcttc
aagtttaaaagaaaactgccaggcagaaacgtctacgctcagatgcacaacgagaaggag
caggaaatgaccagtcctgtcaaccacagcgaggacacgcagaacatcattcagggagaa
gagttcatcgacgacgacctcgactcacagacactaggcaaccactcaggggtggttttg
agcataaactccagagagctgcacagttacctgaccagctga
DBGET
integrated database retrieval system
