KEGG   Danio rerio (zebrafish): 100330645
Entry
100330645         CDS       T01004                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
dre  Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:dre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dre03041]
    100330645
   03400 DNA repair and recombination proteins [BR:dre03400]
    100330645
Spliceosome [BR:dre03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    100330645
DNA repair and recombination proteins [BR:dre03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     100330645
SSDB
Motif
Pfam: AAA_33 SAP AAA_18 AAA_17 SRP54 Zeta_toxin AAA_22 SAP_new25 AAA_24
Other DBs
NCBI-GeneID: 100330645
NCBI-ProteinID: XP_003198760
ZFIN: ZDB-GENE-030131-890
Ensembl: ENSDARG00000079780
UniProt: A0A8M1RF06
LinkDB
Position
5:67709409..67732448
AA seq 873 aa
MSGLNVKKLKVNELKEELQKRGLDTRGLKADLADRLQAALEAEEAGGAPSDEQEKEDFET
GGEPGEGSDDQEDEFADREQDFGEEAKAQFDDGNSTDLFQGGFDDQENESNGDSTEAPMP
GFGSSDAEQKKQFQEPKAMQEYREDEVKQELEESPSHPEPQEEQNFEEPKSRQIPEEDSN
KRSQQENSGRYDVKSEYKADEDAPQQAERSSEWDAQAKSEDDRHSSHSRKRSHDESRGYG
YYEHREERRGRSPQPPAEEEEEDIDDNLVVIDTYNCDLHFKVARDRYSGYPLTIEGFAYL
WAGARATYGVNKGRVCFEMKINEEIPVKHLPSSEPDPHVVRIGWSLDSCSTQLGEEPFSF
GYGGTGKKSCNCKFEDYGEKFTESDILGCYIDFESSEEVEIAFSKNGKSLGSCYRVSREE
LAGRALFPHVLVKNCAVEFNFGQREEPYFPPPEGFTYLQDISLEDRVRGSVGPANKTDCE
ILMMVGLPGSGKTTWALKYAKENPEKKFNILGTNAIMEKMKVMGLRRQRNYAGRWDVLIQ
QATQCLNRLIQIAARKKRNYILDQTNVYGSAQRRKMRPFEGFQRKAIVICPTDEDLKDRT
LKRTDEEGKDVPDHAVLEMKANFVLPDVGEFLDEVRFIELQKEEAEALIKQYNEEGRKAG
PPPEKRFDNRQSGFRGRSNFQRYDNRSGPQGNRSGYQNRGSSGGGGGGFRGGYNRGGYNQ
NRWGNNYRDGGSGGRGGYNRNQQSGGNYNHNRQGSYNKTVSTTSGGYSQPQPQAYNQGYN
QGYTQSSYNQGYNYSNYSQYPGYSQSYSQAPAATAQTYNQQQQSYNQQYQQYAQQWQQYY
QNQSQWNQYYNQYGGYGNYQQGAQGSQGAQGTQ
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgagcgggctcaatgtcaagaagctcaaagtcaatgagctgaaagaggagctccagaag
cgaggcctggacactcgcgggctgaaggcggacctggcggacagattgcaggcggcgctg
gaggccgaggaggccgggggtgcaccgtccgacgagcaggagaaagaagactttgagacc
ggaggagagcctggagagggcagtgatgatcaggaggatgaatttgcagacagggagcaa
gattttggagaagaggccaaggcacagtttgacgatggaaacagcacggatctcttccag
ggtgggtttgatgatcaggaaaatgagagcaatggggacagcactgaggcccccatgcct
ggttttggatcatctgacgcagagcagaaaaagcagttccaggagcctaaggccatgcag
gagtaccgggaggatgaggtgaaacaggagttagaggagtctccatcacatccagagcca
caggaggagcagaacttcgaagaaccaaaatcacggcagatcccagaggaagactcaaat
aaacgcagccagcaggaaaattccgggcgttatgatgtgaagtccgagtataaggctgat
gaggatgcaccacagcaggctgagcggtccagcgagtgggatgcacaggccaaatcagag
gatgaccgacacagctcacatagtcgtaaaagatcccatgatgagagtcgaggatatggt
tactacgagcaccgtgaagaaagaaggggaagatcacctcagcctccagctgaagaagaa
gaggaagacattgatgataatcttgttgtaattgacacctacaactgcgacctgcacttc
aaggtggctcgtgacagatacagtggttacccgctgactattgagggatttgcttacttg
tgggcaggtgctcgtgcgacttatggcgttaacaaaggacgtgtctgctttgaaatgaag
ataaatgaggaaattccagtaaagcaccttcctagctctgagcctgaccctcatgtggtg
agaatcggatggtccctagattcatgcagcactcaactcggtgaagaacccttttcattt
ggctatggaggaactggcaagaagtcttgcaactgtaaatttgaggactatggggaaaag
ttcaccgaaagtgatatccttggctgctatattgactttgaaagcagcgaggaagtagag
atcgcattctccaaaaacggcaagagtctgggctcgtgttatcgtgtctctcgagaggaa
ctggctggacgtgccctttttccacatgtgttggtgaagaactgtgctgtggaattcaac
tttggacagagggaggagccctatttcccgccaccagagggcttcacctaccttcaggat
atttccctggaggacagagtcagaggctcagtgggacctgccaacaaaactgactgcgag
atcctgatgatggttggtctgcctggtagtggaaaaacgacttgggccctaaaatatgca
aaagagaatcctgaaaagaagttcaacatcctgggcaccaacgctatcatggaaaagatg
aaggtcatgggtcttcgtcggcagcgcaactatgcaggacgctgggatgtgcttatccag
caggccacacagtgtctcaacaggctcatccagattgctgcccgcaagaagcgcaactac
atcctggaccagacaaatgtatatggatcagcccagagacgaaaaatgcgtccttttgaa
ggttttcaacgcaaggctattgtaatttgtcccacggatgaggatttaaaagatcgaacg
ttaaagcgaactgatgaggaagggaaggatgttcccgatcatgctgtattagaaatgaaa
gcaaactttgtgctgcccgacgttggtgagttcctggacgaggtgaggttcatagagctt
cagaaggaagaagcagaagctctcatcaagcaatacaacgaagaaggccgtaaagccggg
ccgcccccagagaagcgtttcgataaccgccagagtggtttccgcggtcgcagtaacttc
cagcgctacgacaatcgtagcggaccgcagggtaatagaagtggctaccagaaccgtggc
agctcaggaggaggcggcggaggcttcagaggaggatacaaccgtggaggctacaaccag
aaccgctggggaaataactacagggatggaggctcaggaggccgcggtggatacaaccgc
aaccagcagtctggaggcaactataaccataaccgccagggctcctacaacaagaccgtt
tctacaacatccggaggatacagccagccacagcctcaggcttataatcaaggctacaac
cagggttacacccagagcagctataaccaagggtataactacagcaactacagccagtac
ccaggatacagccagagctacagtcaagccccagcagccacagcacagacctacaaccag
cagcagcagagctacaatcaacaataccagcagtatgctcagcagtggcagcagtactac
cagaaccagagccagtggaaccagtactataaccagtacggcggttacggcaactaccag
cagggagctcaaggcagccagggagcccagggaacacagtag

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