Danio rerio (zebrafish): 100330810
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Entry
100330810 CDS
T01004
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04621
NOD-like receptor signaling pathway
dre05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100330810 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100330810 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
dre04054
]
100330810 (nod1)
Pattern recognition receptors [BR:
dre04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100330810 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_6
LRR_4
NOD2_WH
AAA_16
AAA_22
NTPase_1
NPHP3_N
AAA_18
AAA_30
PIF1
RhoGEF
Motif
Other DBs
NCBI-GeneID:
100330810
NCBI-ProteinID:
XP_002665106
ZFIN:
ZDB-GENE-071116-9
UniProt:
A0A8M1RMD1
LinkDB
All DBs
Position
16:58068086..58086580
Genome browser
AA seq
936 aa
AA seq
DB search
MGSYKTENSYLKLLTVHRELLVEQVKNTQCILDNLLMNSFICTEDIEIIQRSSTKTDQVR
KILELVQSKGEECSAYFTQILYEAYDAYIDLRPWFDEIQYTPLDTIKAIPVVNTDPISKY
CEKLRYELGRDTQFITSYSKSEETPLEDLYTDTQMELLNDTGESLGYLQNLDQLLGDQGV
FNPQAETIFITGDAGVGKSIMLQKLQNLWSRRELKTGAKFFFKFRCRAFSAFKETDEISL
KDLIFKHNCYPDGDPDNEVFAYILRFPETVVFTFDGYDELQMDFDLDNVPETVSPEEKTR
PLLLLMNLLCGKLLKGSRKILSARSGTEIQSRVIRKKVFLKGFAPEHLKRYLALHFPEQE
HRMLVSDQLDANPHLCGLCSIPLFSWIILKSFKHLQSVYDDFELPGSCITLTNVFLLLSE
VFLGHSTARPGLLRRTLRCPTETFKAGEQKLSGFARLALHGIETSKLVFTLDEAVCCGLN
DEDLQFGFLRPASHYDSSSASSFEFLHETLQAFLAAFSLVLDAKLNPESILKFFSKCKYK
KSSRLSCIPCLKNTKPRESDAFQTNFQFTNLFLCGLLSKSNAALLEHLVPPSALKQKRKI
LKSYLSNSVKTHLKSLPRSPSTDIEGDKVHAMPNFLWMLRCIFETNSEDVAKMTANGISA
DYIKIAFCNIYSADCSALNFVLHHRRKHLGVDMDNNNINDYGVKQLRPSFSKMTVVRFCV
NQLTDSGIEVLAEELIRHKIVKVLGLYQNHITDVGAKQVAKIIEECPHLRTVKLGCNNIT
SVGGKYLASAIHKSKSIFDIGMWGNCIGDEGAEAFAEALKNHPSLTNLSLSANGITSHGG
RSLAQTLKENTSLHIVWLIQNKISDDAASDLAEAFRSNSSLTHLMLIDNEFTIDGARQLS
EGLKDNTTLKEVNIKGSRISEAEEHLYQGDRRLRFH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgggctcatacaagactgaaaactcttacctgaagctgctgactgttcacagagagctg
ctggtagaacaggtgaaaaacacacagtgtattttggataatctcctgatgaactcattc
atctgcactgaagatatcgagatcatccagcgcagcagcactaaaacagaccaggtacgc
aaaatcttggagctggtccaaagtaaaggcgaggaatgctcggcgtatttcacacagatc
ctttatgaagcatacgacgcctacatcgatctacggccttggtttgatgaaatccaatac
acgccattagacaccattaaagccataccagtggttaacacagaccccatcagcaaatac
tgtgaaaagctccgatatgagctgggaagagacactcagttcatcacgtcctactctaaa
agtgaggagacgccgctggaggatctgtacaccgacacgcagatggagctcctgaacgac
acaggagagagtttgggatatttacagaatctggaccaacttctcggagatcagggagtc
ttcaacccgcaggccgagactatcttcatcacgggtgacgccggcgttggcaaatcaatc
atgctccagaaactgcagaatctgtggtccagacgagagctgaaaaccggcgccaaattc
ttcttcaagttcagatgcagagcgttcagcgccttcaaagagacggatgagatctcgctg
aaggatttgatcttcaagcacaactgctatccagatggagatccagataatgaggtgttc
gcctacatcttacgcttcccagagaccgtggtgttcactttcgacggatacgatgagctc
caaatggatttcgatttagataatgtgccggaaacggtttccccagaagaaaaaacacga
ccgctgctgcttctaatgaatctgctctgtgggaaactcctgaaaggctccaggaagatt
ctgtcagcaagaagtggcactgaaatccaaagccgggtgattcggaagaaagtgttcctg
aagggatttgcaccagaacacctgaagagatatttagctttgcatttccccgagcaagag
cataggatgctcgtgagcgatcagctcgatgctaacccacatctatgcggtctgtgctca
atcccgctattcagctggatcatcctgaagagctttaagcatctgcaatcagtgtatgat
gactttgagttgccgggttcctgtatcacactcacaaatgtattcctgctgctctccgag
gtttttctcggacactcaactgcacgtcccggactcctaaggcgaacattgagatgtcct
acggagacctttaaagctggtgaacagaagctttcgggatttgctcgactagcattgcac
ggtattgaaacaagtaaactggtgttcaccttagatgaagcggtgtgctgtggattaaac
gatgaagatcttcagtttgggtttttaagacctgcttcgcattacgattcttcatccgca
agctccttcgagttcctccacgagactctccaagccttccttgcagctttttctctagtt
ctggatgcaaaactaaatccagagtcaatcctaaagttcttctctaaatgcaaatacaag
aagtcatcacgtctctcctgcataccttgcctaaaaaacacaaaacccagagagagcgat
gcattccagaccaactttcaattcactaatctattcctgtgcggacttttgtctaaatcc
aacgcagctctcctggagcatctcgtcccgccgtcggcattgaagcagaaacgcaagata
ctgaaatcctatttatcgaacagcgtgaaaactcatcttaagagcctccctcggtctccg
tccacagacatcgaaggagataaagtgcacgcgatgcccaacttcctgtggatgctgcgc
tgcatatttgagacaaacagcgaggacgtggccaagatgacggctaacggcatttctgca
gattatattaagattgcgttctgtaatatttactctgccgactgcagtgctttgaacttc
gtgctgcaccatcgtaggaagcatttgggagtcgatatggacaataataacatcaacgat
tatggcgtgaagcaactgcgaccctctttcagcaaaatgacggtagtgaggttttgtgtg
aatcagctgacagacagcggtattgaggttctggctgaggaactcatcagacataaaatc
gtgaaggtgttgggcctttaccaaaaccacatcacagatgttggagccaaacaagtagca
aagatcattgaagaatgtccacatttgaggaccgtcaagctcggctgcaacaacatcaca
agtgtaggtgggaaatatctcgccagcgcgattcacaagagcaaatctatctttgatata
ggaatgtggggaaactgcatcggtgatgaaggtgcagaagcattcgcagaggctctgaaa
aaccaccccagtttgaccaacctcagtctctccgccaatggcatcacgtctcacggtgga
agaagtctggcacagacattgaaggaaaacacaagtcttcacatcgtctggctgatacag
aataaaatctctgatgacgcagcgtcggatcttgcggaggccttcaggtctaactcgtct
ctgacgcatctgatgttaatagacaatgagttcactattgacggagccagacagctttct
gaaggcctgaaagacaacactacactgaaggaggtcaatattaaaggaagccgcatttct
gaagcagaagagcatctttatcagggcgacagacggcttcgcttccactga
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