Danio rerio (zebrafish): 100330952
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Entry
100330952 CDS
T01004
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100330952 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
100330952 (mid1)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100330952 (mid1)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100330952 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
Pur_ac_phosph_N
zf-C3HC4
zf-C3HC4_2
zf-RING_2
Ig_DSCAM-DSCAML_C
PRY
zf-C3HC4_3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
100330952
NCBI-ProteinID:
XP_068079795
ZFIN:
ZDB-GENE-110411-205
Ensembl:
ENSDARG00000060482
UniProt:
A0A8M3AWB4
LinkDB
All DBs
Position
9:complement(56293513..56438043)
Genome browser
AA seq
667 aa
AA seq
DB search
MDTLESELTCPICLELFEDPLLLPCAHSLCFHCAHRILTSHCAAFDESSKPPSAFQCPTC
RYVITLDQQGLDGLKRNVTLQNIIERFQKASLSGPNSPTETRKQISPSAMSSACEAVQCQ
FCEQDPPQEAVKTCVTCEVSYCQECLRATHPNKKPFTGHRLTEPVPDARLRGLACPEHGE
EKVNMYCITDEQLICSLCKLVGHHREHQVASLGERYDKLKQMLDSNLSNLIKRNSELENL
MAKLIQTCQHVEHNAAHQESKLTEECDTLINIVQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQFVERSSSLIIQADQALKETDHARFLQMAKSISERVSMATASSQVLIPEINLNDTFD
AFALDFSREKKMLEGLDYLTAPNAPTIREELCTASHDTITVHWTSEDEFSVVSYELQYTI
STGQANVVSLCNSMDSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAMNQAGSRSSPPGQLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDEASSMKSHAQDRFGGTGNYGVTGNVYIDSGR
HYWEVLIGGSTWFAIGIAYKSAPKHGWVGKDSTSWVLSRCNTSWAVRHNSKEFPIEPSPH
MRRLGVLLDYDSGSLAFYDAAGTQHLYTFDIAFSQPICPVFSVWNKCLTVLTGLPIPDHL
EISDPHD
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggacacactggagtctgagttgacttgcccaatctgtctggagctgttcgaggatccg
cttctgctgccctgcgcccacagcctgtgcttccactgcgcccaccgcatcctgacatcc
cactgcgcagccttcgacgagtccagcaaacccccctccgccttccagtgtcccacctgc
cgctatgtcatcacgctggaccagcagggtctagacggcctgaaacgcaacgtcactcta
caaaacatcatcgagcgcttccagaaggcctctctgagcgggccgaactctccgactgag
acacgtaaacagatttctccgtccgccatgagttctgcatgcgaggccgtacagtgtcag
ttctgcgagcaggatccgccgcaggaggcggtcaagacttgcgtcacttgcgaggtgtcg
tattgtcaggagtgtcttcgggcgacgcaccctaataagaagccgtttacaggacacaga
ctgacagagccagtcccggatgcaagacttagaggactcgcctgtcccgaacatggagag
gagaaggtcaacatgtactgcatcacagacgaacagctcatttgttcgctgtgtaaactc
gtaggacatcatcgtgaacaccaggtggcgtcgctgggggagcgatacgacaagctgaag
caaatgttggattccaacctcagcaatttgatcaagaggaacagcgagctggaaaacctg
atggcaaagttgatccagacctgtcagcatgttgagcacaatgcggctcatcaggagagt
aagctgacggaggagtgcgacacactgatcaacatcgtccagcagaggcgacagatcatc
ggcaccaagatcaaagagggaaaggtggttcgcttgagaaagctggctcagcagatcgcc
aactgcaagcagtttgtggagagatcgtcctcgctcatcattcaagccgatcaagctctg
aaggagacggatcacgctcgattcctgcagatggccaagagcatctccgagagagtctcc
atggcgactgcgtcctcacaggtcttgatccctgagataaacctgaacgacacgtttgac
gcgttcgcattggacttctccagagagaagaagatgctggaaggtctggattacctgaca
gctccgaatgctcccaccatccgcgaggagctgtgcaccgcgtctcacgacaccatcacg
gtgcactggacatcagaggacgagttcagtgtggtttcatacgagctccagtacaccatc
tccaccggacaggccaacgtagtcagtctgtgtaactcgatggacagctggatgatcgtg
cccaacattaagcagaatcactacaccgttcacggtctgcagagcggcaccaaatacatc
ttcatcgtgaaggccatgaatcaggcggggagccgcagcagcccaccgggacaactcaag
accaacagtcagccatttaaactggacccgaagtcggcccataggaagttgaaggtgtca
catgacaatctgacagtggagcgggacgaagcgtcctccatgaagagccacgcacaggac
cgatttggaggcaccggaaactacggtgtgactggaaacgtgtacatcgacagcggacgc
cactactgggaggtgctgattggaggaagcacatggtttgccatcggcatcgcctacaaa
tcagcccccaaacacggctgggtgggaaaggactcgacctcctgggtgttgagccgatgt
aacacctcgtgggcggttcgtcacaacagtaaagagtttcccatcgagccgtctccacac
atgcggcgtctgggcgtcctgctggactacgactctggatctctggcgttttacgatgca
gcgggaacgcaacacctctacaccttcgacatcgccttctcacagcccatctgccctgtt
tttagcgtgtggaataagtgtttgaccgtcctgacggggctgcccattcctgaccattta
gagatcagtgacccgcatgattaa
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