Danio rerio (zebrafish): 100331367
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Entry
100331367 CDS
T01004
Symbol
kdm1b
Name
(RefSeq) lysine-specific histone demethylase 2 isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
100331367 (kdm1b)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100331367 (kdm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
zf-CW
SWIRM
DAO
Pyr_redox_2
Pyr_redox
Thi4
HI0933_like
FAD_oxidored
FAD_binding_2
Pyr_redox_3
FAD_binding_3
AlaDh_PNT_C
2-Hacid_dh_C
GIDA
Lycopene_cycl
NAD_binding_9
Shikimate_DH
zf-RING_2
ThiF
KARI_N
MurD-like_N
zf-RING_DCST1_C
Motif
Other DBs
NCBI-GeneID:
100331367
NCBI-ProteinID:
XP_073787345
ZFIN:
ZDB-GENE-191016-2
LinkDB
All DBs
Position
19:71178..80854
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AA seq
813 aa
AA seq
DB search
MLADSGRCRGRKRSAAAVGGVEAGGRGRGLDSSGRGRSTTPAPQTRRKAAEAADDEDQAE
KKFRKCEKSGCPATYPVCFASASDRCARNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGY
ETFSSWKRIWTSNGKSEPSLKAFMADQQLPYWVQCTNPDCGKWRQLSKETPLTADLASSY
RCGMKINSVKVEGSDACSQPEDLRVSGVSDSWWFSMLILPPLFKGSPAGPLLRAYYPDCV
GMSPSAEQRHRDQQTSPGLSPYFQPFYQPSECGKALCVRPDMMELDELYEFPEFSRDPTL
YLALRNLVLAAWHQNCREVLTLQSCAPHVCVRGLVRIRCVLELRRVLDFMTRKGLINTGS
LQVTRPLLDQSQHSQKVLVIGAGAAGLAAARQLHNFGMQVLVLEARGRIGGRVWDEVSLG
VTVGRGAQIINGCVNNPIALMCEQSSLQMHTLGVRCELLQEGGRVTDSALDKRMDFHFNA
VLDAVSDWRKDKPQSQDAPLGEKIQEVYKVFLQESGLQFTELEEKVLHFHLSNLEYACGS
TLDQVSVRSWDHNECFAQFSGDHALLTDGYSAVLDKLAQGLDIRLNTAVQRVDYSGEAVK
VWSSCGSHWTAHKVLVTVPLALLQKNSISFTPALPERKLKAIHSLGAGVIEKVALQFSRR
FWDSKVQGADYFGRVPPCPEKRGLFSVFYDMRPQGEECVLMTVVTGEALALIRDLQDSQV
VDLCMQVLRELFPEQDVPDPLRHFVTRWSSDPWSHMAYSFVKTGGSGEAYDIMAEDVQRK
LFFAGEATNRHFPQTVTGAYLSGVREASKIAAL
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgctggcagactcaggtcggtgtcgcggcaggaagcgctcagcagcggcagtgggtgga
gtcgaggcaggtgggcggggccgtgggcttgactctagtgggcggggccgcagcaccaca
cctgcaccacagaccagaaggaaagcggcagaggctgcagacgacgaggatcaggcagag
aagaagttcaggaagtgcgagaaatctggatgtccagcaacgtaccctgtgtgcttcgcc
agtgcctctgacaggtgtgctaggaacggctacacgtcgcgctggtatcacctgtcgtgc
ggagagcacttctgtaacgagtgtttcgatcattactacaggagccataaagacggatac
gagacgttctcctcctggaagcggatctggaccagcaatgggaagagcgaacccagcctc
aaagccttcatggcggaccagcagctgccgtactgggtgcagtgcactaaccctgactgt
ggtaaatggcgtcagctgagtaaagagacgccgctgactgctgatctggcgtcctcgtac
cgctgcggcatgaagatcaacagtgtgaaggtggaaggcagtgacgcgtgctctcagccg
gaggatctgcgagtgtccggtgtgtccgacagctggtggttctcgatgctgattctgccg
ccgctgtttaagggcagtcccgccgggccgctgctcagggcgtattacccggactgtgtg
ggcatgagcccgtcagcggagcagcggcacagagaccagcagacctctcctggcctctcg
ccatactttcagccgttctaccagccgagtgagtgcggtaaggctctgtgtgtgcggcct
gatatgatggagctggacgagctgtacgagttccccgagttctccagagaccccactctc
tacctggccctgaggaacctggtgttggcggcctggcaccaaaactgcagggaggtgctg
acgctgcagtcgtgcgctcctcatgtgtgtgtgcgcggtctcgtccgcatccgctgcgtt
ctggagctgcgccgcgttctggacttcatgacccggaagggcttgatcaacacggggtca
ctgcaggtcacacggccactgctggaccaatcacagcacagccagaaagtgctggtgatc
ggtgcaggtgctgcgggactcgctgctgctcgacagctacacaactttggcatgcaggtg
ttggttctggaggcgcgggggcggatcggggggcgtgtctgggatgaggtgtcgctaggg
gttacagtcggccgcggcgcccagatcatcaacggctgcgtcaacaaccccatcgccctg
atgtgtgaacagtcgtctctgcagatgcacactctgggcgtgcgctgtgagctgctgcag
gagggtggacgcgtcactgactctgctctggacaagcgcatggacttccacttcaatgcg
gttctggacgccgtctctgattggaggaaagacaagccgcagtcccaggatgcaccactg
ggggagaagatccaggaggtgtataaggtgttcctgcaggagtccggtcttcagttcact
gagctggaggagaaggtgctgcacttccacctcagcaacctggagtacgcctgcgggagc
acgctcgaccaggtgtctgtgcgctcatgggatcataacgagtgttttgcgcagttctct
ggtgatcacgcactgctgactgacggatactcggccgtcctggacaaactggctcaggga
ctcgacatccggctcaatactgcagtccagcgtgtggattattctggagaggcagtgaag
gtctggtcctcctgcggctcacactggacggcacacaaggtgttggtgacagtgccgctc
gctctgctccagaagaacagcatctccttcactcctgctctgccagagcgcaagctgaag
gccatccacagcctgggtgcaggagtcatcgagaaggtggctctgcagttctccagacgc
ttctgggacagtaaagtgcagggagctgattatttcggccgtgttcctccgtgtccagag
aagagaggcctgttcagtgtgttctacgacatgcgtcctcagggtgaggagtgtgtgctc
atgactgtggtcacaggtgaggctctggcgctgatccgggatctgcaggactcacaggtg
gtggatctgtgcatgcaggtgctgcgggagctgtttccagaacaggatgtaccggatcca
cttaggcactttgtgacacgctggagctctgacccatggtcccacatggcctacagcttc
gtgaagaccggcggcagcggcgaggcctacgacatcatggcagaggacgtccagcggaaa
ctgttctttgctggcgaggccaccaacagacactttcctcagacggtgacgggcgcttac
ctgagcggcgtgagggaggccagcaagatcgcagcgctgtag
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