Danio rerio (zebrafish): 100331704
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Entry
100331704 CDS
T01004
Name
(RefSeq) collagen alpha-1(XIV) chain
Organism
dre
Danio rerio (zebrafish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
NDNF
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
100331704
NCBI-ProteinID:
XP_021323875
UniProt:
A0A8M9PS14
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Position
19:40470..62053
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AA seq
1676 aa
AA seq
DB search
MRVRGLLVLILTSVLIARAQVDVFSCRSPAVADIVVLVDGSWSIGRINFRLVRLFLESLV
RAFTVGAEHTRIGLAQYSGDPRIEWHLNTHATKEAVIEAVKNLPYKGGNTLTGLALTYIL
ENSFKAESGSRADVPKIGILITDGKSQDDVQFPAQRLRDAGIELFAIGVKNADENELRAI
ASPPEDTHVYNVADFSVMSSIVESLTRSVCERVSELSLEISGETDPDSSKTLDAPRDLLT
SEVTARSFRVSWTHATGPVEKYRVVYYSSSGAQPEEVVVNGDENSVVLQYLNSMTEYQIT
VFAIYSNSASEALRGSETTLVLPTVSSLQLQDVTHSTMRVRWREAEGASGYMILYAPLTE
GDAADEKELKVADSVTQVDLDGLTPATEYTVTVYALYGEDASDPMTAQETTLPLTPARNL
RISDVTHSSAKLTWDTPSPQVKGHKIVYVKTDAVETNQAEVGVVSTVELRNLSAVTEYTI
AIFAVYAEGQAEPLTNTFTTSLAPAPMNLRSSEVSSESFRVTWTHPAPDVTFYRLTWRPA
AGGETKEVLINDHSERFLLSALQPNTEYEVSLSAIYRDESESEPVELSETTAARTTTVAT
TSARTTPAAQRLAVRNLQLSDVTTYSMRVSWDPAGPSARQYRVSYISVCAVYSDGESPPI
TRIARTLPLSAPSGLRVSEQWYNRFRISWVAPPSPTMGYRIVYQPTTGGRALETFVGDDV
NTMLIVNLLSGTEYSVKVIATYTTGSSDALSGRAQTLYLGVSNLSSYQVRATSMCVQWQP
HRHASQYRLVLQPQLHGEKQEMRLPGSASRHCFSELSPNTQYSISVHTQLQETEGPAVST
TERTLPVSTAPPTIASSSAPPPTLPATKEVCRAAKADLVFLVDGSWSIGDDNFQKIIRFL
HSTAGALDQIGPDGTQVAIAQFSDDARTEFSLSSHSSKEELLTAIQRVSYKGGNTKTGRA
MKHVKDSVFAPVGGARRGVPKVLVVLTDGRSQDDVLQVSQELQAEGYIVFAIGFADADYG
ELLSIASRPGDRHVFFVDDLDAFRTIVENILQFGRSVCVSVCKCVCVCVCVCSGFRMMEM
FGLVEHLYSSVDGVSLEPGTFNSYSSYRLARDALLTQPTRFLHPEGLPSDYTISMLFRLL
PETPPEPFALWEILNSSNEPLVGVILDIAGKTLTFFNTDYKGDFQTVTFEGAEIQKLFYG
SFHKVSVCVCVCVCVYHSSQCEEEPAPAELCCNASCAAPDPDQMNRPVHHTLRVNRFSTF
VFSLCVCVCVCVCVCLQRKEADCPSLPRACTCTQDSKGPPGPAGPPGGPGIRGARGDRGE
PGPVGPVGPVGDAGVPGAQGPPGPPGPSGRSIRGPLGAPGESGQKGDAGPPGPQGVPGSP
GSVGRDGPPGLRGLPGQDGPQGRVGPPGPIGGPGAPGAPGENGPPGPTGDQGPPGAAGPK
GEKGERGEVQSTASVQAIARQVCEQLIQSHMARYSSILNHIPSQPVSIRTVPGPPGEPGR
QGLPGPQGEQGPPGRPGFPGTNGENGQPGARGVQGEKGEKGNPGVGVQGPRGPAGTPGPP
GEGRTGSPGPSGRPGSPGSPGRPGIPGPVGPAGPPGYCDQNACLGYNVGGADLTDIDVPV
VQLPPSSYQPYGPEGEAEEADPYGSYGSYYQPNYPPPRPVQEEEEELRSPGMQRQT
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttcgagggctgctggtgctgattctgacatcagtgttgatcgcgcgggctcaa
gtggatgtgttctcctgtaggtctcctgcagtggctgatatcgtggtgttggtggacggc
tcctggagcatcggccggataaacttccgtctggttcgtctgtttctggagagtctcgtc
agagcgttcactgtcggggcggaacacactcgcatcggtctggcgcagtacagcggtgat
ccgcgtatcgagtggcatctgaacacacacgccactaaagaggccgtgatcgaggctgtg
aagaacctgccttataaaggaggaaacacactcacaggtctggctctgacctatattctg
gagaacagctttaaggctgagtcgggttcgagagctgacgttcctaagatcgggatcctg
atcacagacgggaaatctcaagacgacgttcagtttccagcgcagagactccgagacgca
ggcatcgagctgttcgccatcggggtgaagaacgcagatgagaatgagctgcgtgcgatc
gcgtctcccccagaggacacacacgtgtataatgttgctgatttcagtgtgatgagctcc
atcgtggagagtctgacccgcagtgtgtgtgagcgcgtgtccgagctcagcctggagatc
agcggtgaaactgatccagattcctccaagactcttgatgctcctcgtgaccttctgacc
tctgaggtcacagccaggagcttccgtgtgtcatggacgcacgccacaggcccagtggag
aaatacagagtggtgtattactcctccagcggagctcaacctgaggaggtggtggtgaac
ggcgatgagaactccgtggtgttgcagtatctgaactctatgacggagtatcagatcaca
gtgttcgctatttacagcaactcagccagcgaagccctgagaggcagcgagaccaccttg
gtgctgccgacggtcagcagtctgcagctgcaggacgtcacacacagcactatgcgtgtg
cgctggcgagaggctgaaggggcctctgggtacatgatcctgtatgcaccactgacggag
ggagacgccgctgacgagaaggagctgaaagtggctgactctgtgactcaggttgatctg
gacggtttaactcctgctactgaatatacggtgacggtttacgctctgtacggggaggac
gccagcgaccccatgactgcgcaggagaccacgcttcctctgactcctgcacgtaacctg
cgcatctcagacgtcacacacagctccgctaaactgacctgggacacgccctctccacag
gtcaaaggtcacaaaattgtatatgtgaagacggacgccgtggagaccaatcaggctgag
gtgggcgtggtcagcacagtggagctgcgtaacctgagcgcagtgaccgaatacaccatc
gccatcttcgcagtgtacgcggagggccaggcggagccgctcacaaacaccttcaccacc
tcgttggctccggccccgatgaacctgcgctccagtgaggtgtccagcgagagcttcagg
gtcacctggacccaccccgcacctgacgtcaccttctacagactcacctggagaccagcg
gctggaggagagactaaagaggtgctcatcaatgatcactcagagcggttcctcctctcg
gcgctgcagcccaacactgaatatgaggtttctctgtccgccatttacagagacgagtcc
gagagcgagccggtggagctgagcgagaccacagctgccagaacaaccacagtggctacg
accagcgcccggacgacaccagccgcgcagcgtctggccgtcaggaacctgcagctcagt
gatgtgaccacctacagcatgcgtgtgtcgtgggaccctgcgggcccgagtgcgcgtcag
taccgcgtgtcgtacatcagtgtgtgtgcggtgtacagcgacggagaatctccaccaatc
acacgcatcgcccgcacactgcctctgtctgcccccagtggtctgcgtgtgtcggagcag
tggtataaccgtttccgcatcagctgggttgctccgccctcgccgaccatgggctacagg
atcgtctaccagcccacgacaggtgggcgtgctctggagacatttgtgggtgacgatgtg
aacaccatgctgatcgtcaacctgctgagcggcaccgagtacagcgttaaggtcatcgcc
acctacaccaccggctccagcgacgccctgagcggacgcgcacagacactgtatctgggc
gtcagtaacctcagcagttatcaggtgcgggcgaccagcatgtgtgtgcagtggcagccg
caccgccacgccagccagtaccgcctcgtcctgcagccgcagctccatggtgagaaacag
gaaatgaggctgccaggctccgcctccagacactgcttcagtgagctgagcccgaacaca
cagtacagcatcagtgttcacacacagctgcaggagaccgagggccccgccgtcagcacc
accgagaggacgcttcctgtgagcacggctccacccaccatcgccagcagctccgcccct
ccgcctaccctgcccgccactaaagaagtgtgtcgagctgctaaagctgatctggtgttc
ctggtggacggctcgtggagtatcggagacgataacttccagaagatcatccgcttcctg
cacagcacggctggagctctggatcagatcgggccggacgggactcaggtggccatcgct
cagttcagtgacgacgcgcgcacagagttcagcctcagctcacacagcagcaaagaggag
ctgctcaccgccatccagagggtcagctataaaggaggaaacaccaagacaggccgagcc
atgaagcatgtgaaggactctgtgtttgcgccggtgggcggggccagaaggggcgtgcct
aaagtgctggtggtgttgacagacggccgttcccaggacgacgtgctgcaggtgtcccag
gagctccaggctgaaggctacatcgtgttcgccatcgggttcgcggacgcggattacggc
gagctgctgagcatcgccagtcgccccggagacagacacgtgttctttgtggacgacctc
gacgccttccgcaccatcgtggagaatatcctccaattcggcaggagtgtgtgtgtctct
gtgtgtaagtgtgtgtgtgtgtgtgtgtgtgtgtgttcaggcttccgcatgatggagatg
ttcgggctggtggagcacctgtacagtagtgtggacggcgtgtcgttggagccgggaacc
ttcaacagctacagcagctacagactggccagagacgcactgctcacacagcccaccagg
ttcctccaccctgagggtctgccgtctgactacaccatctccatgctgttccgcctgctg
cccgaaacgcccccggagccctttgcattgtgggaaattctcaacagcagcaacgagccc
ttagtaggcgtcattctggacatcgcagggaagaccctaaccttcttcaacactgactat
aaaggagacttccagaccgtcacgtttgagggagccgagatacagaagctgttctacggc
agcttccacaaggtcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaccacagcagtcag
tgtgaagaggagccagcaccagcagaactgtgctgcaacgcatcatgtgctgctcctgat
ccagaccaaatgaaccgaccagtgcatcacacgctaagagttaaccggttcagtaccttt
gtcttttcactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgcagaggaaggaa
gctgactgtccgtctctgccgcgtgcctgtacctgcactcaggacagtaaaggcccccct
ggacccgccggacccccgggaggtcctgggatcagaggtgctcgaggagatcgtggtgaa
cccggccctgtgggtcctgttggtccagtaggggacgctggtgttcccggtgctcagggg
cctcctggtcctccagggcccagcggacgctccatcagaggccctctgggcgctccgggt
gagtcgggtcagaagggtgatgctggtcctccagggccacagggtgttcctggatctccg
gggtctgtgggccgtgatggacctccagggttacggggtctaccgggtcaggacgggcct
cagggtagagttgggccaccgggacccattggaggtccaggagcccccggagccccaggt
gagaacggccctccaggacctacaggagaccagggccctccgggagccgcggggcccaaa
ggggagaagggtgagcggggtgaagtccagtccaccgcttctgttcaggccatcgccaga
caagtgtgtgagcagctgatccagagccacatggcgcgctacagctccatcctgaaccac
atccccagtcagccggtgtccatccgcacggttccggggcccccaggagagcccggccgg
caggggcttccaggacctcagggagagcaggggccgcccggacgacccggattccccggc
accaacggagagaacggccagccgggagccagaggtgtccagggggagaagggcgagaag
ggtaatccgggtgttggtgtccagggaccacgaggacctgctggaactccagggcctcct
ggtgaaggcagaacaggaagtccaggaccatctggtcggcctggaagccccgggagtccc
ggaagacccggaataccaggaccggtgggtccagcaggtcctccaggatactgcgaccag
aacgcctgcctggggtacaacgtaggaggcgctgacctcactgacatcgatgtccctgta
gttcagcttccgccgagctcctaccagccgtacgggccggagggtgaggcggaggaggca
gacccgtacggcagctacggctcctactatcagcccaactacccaccgccacggcccgtc
caggaggaagaggaggagctgcgctcgcccggcatgcagaggcagacctga
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