Danio rerio (zebrafish): 100331958
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Entry
100331958 CDS
T01004
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
dre03037
]
100331958 (ttc28)
Cilium and associated proteins [BR:
dre03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
100331958 (ttc28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_16
RPN7
TPR_11
TPR_17
TPR_14
TPR_9
TPR_NPHP3
TPR_19
TPR_6
PUB
NeuB
Motif
Other DBs
NCBI-GeneID:
100331958
NCBI-ProteinID:
XP_017213483
ZFIN:
ZDB-GENE-140106-238
Ensembl:
ENSDARG00000114920
UniProt:
A0A8M6Z8C1
LinkDB
All DBs
Position
10:3534525..4040531
Genome browser
AA seq
2462 aa
AA seq
DB search
MEKQGARREKFGLFAPQALGRAVHAASEGPGLSKAEFMEKVRQSNEACQLGDFQTAVKLY
GEALRADPQNCILYSNRSAAHLKLGQYQTALDDAVKARLLNPKWPKAYFRQGVALQYLGR
HADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFVVVSV
IGQELLTASHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAYWSLGNTEKSTAYMQQDL
EVAKTLGDQTGECRAHGNLGSAFFSKGNYREALSNHRHQLVLAMKLKDREAASSALSSLG
HVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFDNAVQCHEQHL
SIAKSLGNKREEARAYSNLGSAYHYRRNFDKAMSYHTHVLELAQELEEKSIEMRAYAGLG
HAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLHKAHL
SIAQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTHGNLA
VAYQALGAHDRALQHYQNHLNIARELRDIQSEARALGNLGNFHCSRGEFPQAVPYYEQYL
RLSPDLQDMESEGKVCHNLGYAHYCLGNFQEAVKYYEQDLALAKDLHDKLSQAKAYCNLG
LAFKALGDYTKAEECQKYLLSLAQSLNNSQARFRALGNLGDIFLCKKDIPGAVKFYEQQL
SLAHKVKDRKMEANAYAALGAAYRMLQKFDKALGYHTQELEVYQELGDIQGECQAHGHLA
AVYMSLGKYTMAFKCYEEQLELGQRLKDPSVEAQVYGNMGITKMNMGVMEEAIGYFEQQL
AMLQQLSGNEAVLDRGRAYGNLGDCYDSLGDFEEAIKYYDQYLSVAQSLSHMQDQEKAYR
GLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGSLHSQLGNYEQAISCLE
RQLGIARDTQDRLLEGDASCGLGAVYQLMGEHDTALQFHQLDLQIAEETGNASCQGRAYG
NLGLTYESLGNFERAVVYQEQHLSIAAQTNDLVAKTLAYSSLGRTHHALQNYSQSVMYLQ
EGLRLAEQLGRREDEAKIRHRLGLSLWASGNLEESQHQLYRASALFETIRHEAQHSTDYK
LSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPYTPVT
VEHILDTVNGQRALVLYFSLAAGYLYSWLLAPGSGILKFHEVYLGEGSSEVGASDFQEGG
ACTPAASSCGGSSLEQHITNAREALGVDSYYSRACSSSETESEAGDLLDQQFEELNNKLN
SVTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTVSPVKEGTSSLPRRTSALSKPPLRALYD
LLIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSI
GSLGTTAKVHPRRTGPLLCNGGSSMAAVVGNPRLPPSVMDRWLWGPMPTAEEEAHMVADL
LGCQPLAGPAATKERVMSALTQAECAHFATHISWKLAALVLTPSQDSNSGSGAAASGGGA
GGGESGGKSNYTIPESLRVPDDASDAESICDSPPLQEFLLTAADILDLRLPTKLVVLGSY
QESDSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVAASKMFVHAFYSALLNGTKASAAL
ADAMKTVQSSKQFSHPSNWAGFMLIGSDVKLNSPSSLIGQALAEILQHPEKARDALRVLL
HLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLTAVGFRLDSAGTGLPAAVFFP
TTDPGDRLQQCSTTLQSLLGLPPPALQALCKLITASETGEQLINRAVKNVVGMLHQVLVQ
LQSGEKEHDFSLAPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKQANRRT
MHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVCHQLPMGYPNPPFSPPCPDSLA
SDAISVYSLSSIASSMSFLSRPEGASEFISQRSRQQELERHRGGAGLFASHRHTVVPRSR
SSPHGAVGGHEDEEYEGYSIISSEPLGSQCDTLPRPANHRNHRGAARGGAGRGYAVSVSS
RGSVSTPTSPVKATLVPSPNSPFQKVGKVSSSDTGESDQSSTETDSTVKSQEERTPGAPL
DPQELAQKILEETQSHMRAVETLQRSVPLGDGMSGGGPPTPTGGSAFRSSETSAFSRPSS
RASIKAQSSPLPARPKPPSRTSSLQKVSSGYNSPATSETSLKEGSQPSPTSDSHAQFKLK
YPSSPYSGHISRSPSNISPSSGHQSPAGSAPSPALSYSSTGSTRSSPADAPDIDRIKLAA
IDEKVQAIHNLKTFWANATQQQHSGPMRALHGGKLSTAKRDVLGLLNLSPRHGMTGQDSP
NQNVALEHRNPPNGHRKIDPKRVAPSPTASTRSSPGLQPIRLPTGNGYKFLSPGRFFPSS
KC
NT seq
7389 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaaggagcgagacgcgaaaagtttggcctgtttgcgccacaagcactgggc
agggctgtccacgccgcatctgaaggcccgggcctcagcaaggcagagttcatggagaag
gtgcggcagagcaatgaggcctgccagctgggagacttccagacagccgtcaagctgtat
ggcgaagcactgcgcgccgacccgcagaactgcatcctgtacagcaaccgctcggccgcc
cacctcaaactgggccagtaccagaccgccctggacgacgctgtcaaagcccgcctgctc
aaccctaaatggccgaaggcgtacttccgacagggtgttgcccttcagtacctgggccgc
catgcggacgccctggccgccttcgcctcgggattggcgcaggatcccaagagcctgcag
ctgctggtgggaatggtggaggccgccatgaagtccccactaagagaatcactagagccg
acctaccagcagctgcagaagatgaagctggacaagagcccgtttgtggtggtatctgtg
attggtcaagagcttctgaccgcctcccatcatggggcatcagtggtggtcctggaggcg
gcgctgaagatcggcacctgcagcctcaaactgcgcggctcagttttctcggccctcagc
agcgcttactggtcattgggcaacaccgagaaaagcaccgcatacatgcagcaagactta
gaggtggccaaaactttaggtgaccagacaggtgaatgtcgcgctcacggaaacctgggg
tcggccttcttctccaaggggaattaccgtgaagctctgagcaaccacagacaccagctc
gtcctggccatgaaactcaaggacagagaggcagcatcttcagccctcagcagcctgggt
cacgtctacacagccatcggggactatcccaacgctctggccagtcacaagcagtgcgtc
ctgctggccaaacagtccaaagaccagctgtctgaggcccgcgagctgggcaacatgggc
gcagtctacatcgcgatgggcgactttgacaacgctgtgcagtgccacgagcagcacctg
agcatcgccaagagcctcggcaacaagcgcgaggaggcccgagcctacagcaacctgggt
agcgcttaccactaccgccgcaacttcgacaaggccatgtcctaccacacgcacgtgctg
gagctggcgcaggagctggaggagaagagcatcgagatgagggcgtacgccggcctggga
cacgctgcccgctgcatgcaggacctggagagagccaagcagtaccatgagcagcagctg
agcatcgctgaaggcctgaaggacagagccgccgagggcagggcttcatctaacctggga
atcattcaccagatgaaaggggactatgagactgctctgaagctgcacaaggctcatcta
tccattgcccaggagctaaacgactacgctgcccaaggcagagcctacggaaacatgggc
aatgcttacaatgccctcggtgcttttgaccaggctgtgcgctaccatcgacaagagctg
cagatttccatggaggttaatgatcgtgcctcacaggcttcaacgcatgggaacctggct
gtggcataccaggctcttggtgcacacgatcgagcgttgcaacattaccagaatcatttg
aacattgctcgagagttgagggacatccagagtgaggctagggctttgggtaacctgggt
aacttccactgctctcgaggtgagtttccccaagctgtaccctactacgaacagtactta
cgactttcgccggacttgcaagatatggagagtgaaggcaaggtctgtcacaacttggga
tatgcacactactgtctgggcaacttccaggaagcggtgaagtactacgaacaagacctg
gcacttgccaaggacctccatgacaagctaagtcaagccaaagcctactgcaatctgggc
ctggccttcaaggcacttggtgactacaccaaggcggaagagtgccagaagtaccttctt
tccttggcgcagtcgctaaacaactcgcaggctcgtttccgtgccttgggcaacctggga
gatatcttcctttgtaagaaagacattcctggcgctgttaagttttacgagcagcagtta
tccttggcacataaggtcaaggaccgcaagatggaggcgaatgcctatgccgcattggga
gctgcctaccgtatgctacagaagtttgacaaagccttaggataccacacccaggaacta
gaggtgtaccaggagctgggcgacatccagggagagtgccaggctcacgggcaccttgca
gctgtatacatgtcacttgggaagtacacaatggcgttcaaatgctacgaggaacagctt
gagctcggccaacgtctgaaggaccccagcgttgaagcccaggtctatggtaacatgggc
atcactaaaatgaacatgggagtaatggaggaagctattggatactttgagcaacagttg
gcaatgttgcagcagctcagtggcaatgaggctgttctggaccgtggtcgggcctacggg
aacttgggagactgctacgactcgctgggtgatttcgaagaggcaataaagtattatgac
cagtatctctccgtggcacaaagcctcagccatatgcaggaccaggagaaggcatacaga
ggtctgggtaatggacacagggcgatggggaaccttcagcagtctctggtgtgttttgag
aagcggttagtggtggcgcatgaacttggagagtgtgggggaaaagctcaagcttacgga
gaactgggcagcttgcacagccagctggggaactacgagcaggccatctcatgcctggaa
cggcagctcggcatcgcccgcgacacccaagatcgattgctggagggtgacgccagctgt
ggcctgggcgctgtttatcagctgatgggcgaacacgacacagctcttcagtttcaccaa
ctggatctccagatcgcagaagagacaggcaacgccagctgtcaaggtcgggcctacggt
aatctcggactcacttatgagtctctgggaaatttcgagcgagcagtggtttaccaggag
cagcatctgagcatcgcagcacagaccaatgacctggtggccaaaactctggcatacagc
agcctgggacgaacacatcacgctctgcagaactactcacagtccgtcatgtacctgcag
gaaggtctgcgtctcgccgagcagctgggtcgtcgggaggacgaggccaaaatccgacac
cgtctgggtctctcgctgtgggccagtggcaatctggaggaatcccagcaccagctgtac
cgtgcgtcggctctattcgagaccattcgtcatgaagcccagcacagcaccgactacaag
ctctccctcttcgacctgcagacctcctcgtaccaggctctccagagggtccttgtcagc
cttggtcaccatgatgaagctctggctgtggcggagcgtggacgcactcgggcctttgct
gacctgctggtggagagacagacgggtcagcaggactcagacccttacacacctgtgacg
gtggagcacattctggacactgtgaacgggcagcgggctctggtgctctacttctccttg
gcggctggatatctgtacagctggctcctggctccgggatccggtatcctgaagtttcat
gaggtgtatctgggtgagggctcatcggaggttggagcttcagacttccaggaaggcgga
gcctgtacacccgcggccagcagctgtggaggctcgtcgctagagcagcacatcactaat
gcgcgtgaagccctgggtgtggactcatactacagcagagcgtgttccagcagcgagacg
gagagtgaagcaggcgaccttctggaccagcagtttgaagaactcaataataaactcaac
tcagtgacggaccccactggctttctgagaatggtttccagaaacaacctcttcaacagg
agttgtcagagcatgacgagtctcttcagtaatacagtgtctccagtgaaggagggcaca
tcgtctctgccccgtcgcaccagtgccctcagcaaacctccgctacgagccctttatgac
ctgcttatcgccccaatggaggggggtctaatgcattccagtggtccggtgggtcgacac
aggcagctggttctggttctggagggcgagttgtatctaatcccatttgctctgctgaag
ggaagctcatctaatgagtatctgtatgagcgcttcagtctcatcgccgtaccgtctatc
ggcagtctggggaccacagctaaagttcatccacggcggactggtcctcttctgtgtaat
ggaggaagctccatggctgcagtggtcggaaaccctcgtctgccaccatcagtgatggac
cgctggctgtggggtccgatgcccaccgctgaggaggaagctcatatggtggctgatctt
ctaggctgtcagccgttggccggtcctgctgccacaaaggagcgggttatgagcgctctc
acccaagccgagtgcgcccatttcgcaacgcatatctcctggaaactggcagcccttgtc
ctgacgcccagccaggacagcaactctggatccggggcagccgcttcaggtggaggagca
ggaggtggagagagtggaggaaagtcaaactacaccatcccggagagtctgcgcgtgccg
gacgacgcaagcgacgctgaaagcatctgtgacagcccgccgctgcaagagtttctgctc
accgccgcagatatccttgatctcaggctgcccactaaacttgttgtgctgggctcgtac
caggagtctgatagtaaagtgactgcggatggagtggttggattgacgagggctttcctg
gcggccggagctcagtgtgtgctggtgtctttatggccggttcccgttgcagcctccaag
atgtttgttcatgcgttctacagcgctctgcttaatgggaccaaggccagcgcagcgctc
gccgacgctatgaagactgttcagagtagcaaacagttctcacacccgtccaactgggca
ggctttatgctgattgggagtgatgtgaaactgaacagcccgtcatctcttattggtcag
gctctggctgagatcctgcagcatccagagaaagccagagatgccctgagggttctgcta
cacctggtggagaaatctctccagcgcattcagaatggccagaggaactccatgtacacg
tctcagcagagtgtagagaataaagtgggtggcgtgcccggctggcaggctcttctgaca
gcagtgggattcagactggactcggctggaacgggcctccctgcggccgtcttcttcccc
accacagaccccggagaccgactgcagcaatgcagcaccaccctacagtcactgctgggt
ctgccccctcctgctctgcaggcattgtgtaaactgatcacggcttcagaaaccggagaa
cagctgatcaaccgggctgttaaaaatgttgtgggaatgctccatcaggttttggtgcag
ttgcagtctggagagaaggagcatgatttctctctcgcacctatccaagtgtccatcagc
gtgcagctctggagacttcctggctgtcacgagttcctggctgcattggggtttgacctg
tgtgaggtcggtcaggaggaggtggtgttgaagacgggcaaacaggccaaccgtcgcact
atgcactttgccctgcagtcgctgctggcactgtttgactctactgagcttccgaagcgt
ctaagcctggatagttcatcgtctctggagtctctggcctctgcacagtctgtgtgccac
cagctgccaatgggctaccccaacccgcccttttcccctccatgccctgacagcctggct
tcggatgccatctcggtgtacagcctgagctccattgcctcctccatgagcttcctatcc
cgtcctgagggtgcgtccgagtttatcagccaacgctcaaggcagcaggaactggagcgg
catcgagggggagctgggctgttcgcatcccatcggcacacggtagttcctcgcagccgc
tcatctccacatggagccgttggaggacatgaggatgaagagtacgaaggatacagtata
atcagtagcgagccactaggtagccaatgtgacacactccctcgtcccgcaaaccacagg
aatcatcgaggtgctgcgcgtggtggggccggtaggggttatgctgtgtccgtgtcctcc
aggggaagtgtaagcaccccaacgtctcctgtcaaagccaccttggttcccagtcccaac
tcgcccttccagaaggttgggaaggtgagcagctctgacacaggggagtctgatcagtcc
agcacagagacggacagcactgtgaaatcccaagaggaacgcacgcccggagctcctttg
gacccacaagaactggcgcaaaagattctggaagaaacgcaaagccacatgcgagctgtt
gagacgttgcagagaagtgtgcctctgggtgacgggatgagtggtggaggtcccccgacc
ccaacaggagggtctgctttccgatcttcagagacaagtgcattcagtcgtcccagtagc
agggcaagcatcaaggcacagtcgtcgccccttccagcacgccccaaaccaccatcccgg
acgtcctccctccagaaggtcagctcgggatacaacagtcctgccacatccgaaacatct
cttaaagaaggcagccaaccttcacctacttctgacagtcatgcccagtttaaactcaag
tatcccagctcgccctacagcggccacatctcccggtcacctagcaacatctcacctagc
tcaggtcaccagtcgccagctggaagcgctccttctccagctctgtcctactcctccact
ggctcaacacgctctagtccagcagacgctccagatattgaccgaatcaaactggcggca
attgacgagaaagtccaagcgatccacaatcttaagaccttctgggccaacgcaacccaa
cagcagcactcgggaccaatgcgggcgctacacggcggaaaactgagcaccgccaaacgg
gatgttcttggtcttttgaacctctctccccggcatggcatgacaggtcaggattccccc
aaccagaatgtggcactcgagcacagaaatccacccaatggccatcgcaagatcgatccc
aagagagttgcaccttctccaacagcttccaccagaagcagtccgggtttgcaacctatc
cgactgcctacagggaacggctacaagttcttatcacccggacggttcttcccttcatct
aaatgttga
DBGET
integrated database retrieval system
