Danio rerio (zebrafish): 100332174
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Entry
100332174 CDS
T01004
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100332174 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dre01009
]
100332174 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
100332174 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
dre03029
]
100332174 (rb1cc1)
Protein phosphatases and associated proteins [BR:
dre01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100332174 (rb1cc1)
Membrane trafficking [BR:
dre04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100332174 (rb1cc1)
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100332174 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
SMC_hinge
DUF6950
Motif
Other DBs
NCBI-GeneID:
100332174
NCBI-ProteinID:
XP_073797102
ZFIN:
ZDB-GENE-130206-1
Ensembl:
ENSDARG00000076559
LinkDB
All DBs
Position
24:38682340..38717976
Genome browser
AA seq
1622 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVLDLKHAIQAKYKIAIQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILCDRAPTIPKTTFTIENEMELKVEESLMMPAVFHTVASRTQ
LALEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLLKFDTAYTNYQQ
DFEDIKLKLTKLGIAVSVMAKIPLLECLTRHSYRESLEKSSSPRPRIIDEDDDIEDEEIA
EASTRSPALCPPDNLKNQKSPSPVSASSQASSSPQDRLKSSSSLKEALQEEEESPERMAM
PSFNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLTECRETITKLDNQNMKA
IKGLEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHANQLM
IMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELLE
RVRVVEALSTVPQMYCLAVVEVVRRKMFIGHYRQWANALVKDGKNLYEAEKVKRETFGKL
FRKSFLRNRLFRGLDSWPPSSFCTRKPRRFDFELPDISLSDLQYLKSCCPSEVQPYLRVP
TLCDFEPLNQHVEVLHQLVQAAQSVDEMSQTITDLLNEQKNSYSQSAQRSTALTPRSESA
IEITSTSTKTLSTLSLKAPDCQPLALPGPLEDLSPDSIDAQTFDFETIGHPSMDPVLQQG
SLDLDSLAESPESDFMSAVNEFVIEENLLSPNPISDPTSPEMMVESLYSSVINAIDSKRI
QDTTTLEKENSKIAAIKLSADRYRSAAEESQNNLRKVKEDLYHFRGLVLKEQRDFGFALK
TMTTEVHNALSNVSYSHEEELKETQQTHLQSLKEDHEKQIRTLTEELEGNQKIVKDVQRA
MLELEGLVERKEKEIYQLESERERSTQELQDLHKQAVQNLEEKILKQSEELKSALLSKDE
LAGQLEKLHFEIEHGQQKIRQEMKNAEKVHLQELETRLNQQHEAELQTFRLEKESALDKL
VQDNLVKLRDLMDSHSAELKERDGRSKDMDARITELADARCKLEVEMALKEAEMEDMRLQ
YEEAKSTQEEVLKAEFATQTSTLKMQIDTLSLQLHQKNEEYEVGLAELRALMRLEKDHCI
SELVDRHEEESTLLRHEFSALKQKSQDVEKDCEERVLKIERDYKDRVDALQREKVEEQRA
FQEKEDDLRTVIGDLQAENSLLSGRLEQERVEALLRVQEEKEEAVKAALQEALRDIQLQK
EETETRLLGQIELLEKQLKDRQSTDTVASSAEQTEAGVQAETAVSLDSGQWTEERASLLA
KLELLERTKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIISDLTEKLKNVMQQQEKD
KGLIETLSEDRASILQEKKQLEEELNRLRSTVLVSSSFFPPNPIVPVVAEAHGACGPAQV
DALSPSFPDPERLISMAAFRDEERVESAVEASMMTVHSDNSMLSEEKQRILILERTLHMK
EEENKRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYF
LHSESLTALDLKPATGATRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNK
KV
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgtttcaagtcaacaatggaagcacattaacgtttgacactgaactt
gctgtccaaactgttttggaccttaaacatgccattcaggccaaatataaaattgcaatc
cagcaccaagtgctggtggtcaatggaggggaatgtatggtggcagagaggcgggtgtgc
agctacagcgctggaacagacaccaatccaatcttcttattcaacaaagagatgattttg
tgtgaccgagctccaaccatccccaaaacaaccttcaccattgagaatgagatggagctg
aaggtggaggagtcccttatgatgcctgccgtctttcacaccgtcgcctcccgcactcag
ctggctttggaaatgtttgaggttgccaagaagctttgctcgttctgtgagcgtctggtc
catgatgaacaccttcagcaccagggatgggcagccatcatggccaacctggacgactgc
accctttcctatcagaaactcctcctgaaattcgacaccgcttacacaaattaccaacag
gatttcgaggacatcaaattaaaactcaccaagcttggcattgctgtttcagtcatggcg
aagattccactactggagtgtttgactcggcacagctacagagaaagcctggagaaatcc
agctcccctcgcccgagaatcatagatgaagacgatgacattgaagatgaagaaatagca
gaagcgtccactcgctctcctgccctctgtcctcctgacaacctaaagaatcaaaagtct
ccttcaccagtctctgcttcctcccaggcgtcttcctctcctcaggacagactgaagagc
agctctagtctgaaagaagcgttacaggaagaagaggagtctcctgagaggatggccatg
ccctcttttaatgtcacccttttggattggatcaatgttcaggacagacctaatgatgta
gagtcagttgtaaggaagtgttttgactcaatcaacaggcttgatccacgaattatccag
ccctttctgacggaatgccgtgaaaccattaccaaattggataatcagaacatgaaggcc
atcaaaggtcttgaggacagattgtatgcgcttgaccaaatgatcgcaagctgtaaaaag
ctggtcaacgaacagaaggaacttgctcagggatttcttgccaatcagaagagggctgaa
aacctgaaggacacctcggtgcttcctgacctgtgtctgagtcacgccaaccagctgatg
attatgctgaccaatcacaggaagctactagacatcaagcagaagtgtaccactgccaaa
caggagctcgccaacaaccttcaagttcgactcaaatggtgctgctacgtgatgcttcac
gctgatcaggatggagagaaactgcaggctctcctgaggctgctgacggagctgctggag
cgcgtgcgggttgtggaggcgctcagtactgtgccacagatgtactgtcttgctgtagtg
gaggtggtccggcgcaaaatgttcataggacactacagacaatgggcgaatgctcttgtc
aaagatggaaaaaacctctatgaggcggaaaaagtaaaaagggaaacctttggaaagcta
ttcaggaaatcgtttctcagaaatcgcttgtttcgaggactggactcatggccaccctct
tcattttgcacgcgaaagcctcgaaggtttgactttgagcttccagatatctctctgagt
gacctgcagtatctcaagtcctgttgtccttccgaggttcagccttacctcagggtcccc
acactgtgtgactttgagcctcttaaccagcatgttgaggttctccaccagctggttcag
gcagcgcagagtgtggacgagatgtcacaaactatcacggacctacttaatgaacaaaag
aattcctatagccagagtgctcaaagatccactgcgttaacacccagatctgaaagcgca
attgaaatcacctctacctccaccaaaactttgtccactcttagtttaaaagcaccggac
tgccaacccttggcgcttcctggtccactggaggacctgtcacccgacagcatagatgcc
cagacttttgattttgaaactattggccatcccagcatggatcctgtattacagcaaggc
tcattggacttggattcattggcagaaagtcctgagtctgactttatgtccgcagttaat
gagtttgttattgaggagaatttgctgtcacctaatcctattagcgatcccacaagccca
gagatgatggtggagtctctctactcctccgtcataaatgcaattgatagcaaacgcatc
caggacactaccaccctggagaaggaaaattcaaagattgctgcgatcaagctatcagca
gacaggtatcgttctgctgccgaagagtcccagaacaatttgagaaaagttaaagaagac
ctttatcattttcgaggtcttgttctgaaagagcaacgggactttggattcgccctgaaa
acaatgaccactgaggtccataatgctctcagtaatgtcagttactctcatgaagaggag
ctaaaagaaacacaacaaacccatctccagagtttaaaagaggaccatgaaaagcagata
cgaacactgacagaagagctggagggcaaccagaagatagtcaaagatgtccagagagca
atgctggagttggaggggcttgtggagcgcaaggaaaaggaaatatatcagctggaaagt
gagagggaaagatctacgcaagaactgcaagatcttcacaagcaagctgtgcaaaacctt
gaagagaagatcttaaagcaaagcgaagaactcaaatctgcattgctgtccaaggatgaa
ctcgctgggcaattggagaagcttcactttgagattgagcatggccagcagaaaatcaga
caggagatgaagaatgctgagaaggtgcatcttcaggaactggagacacggttgaaccag
caacacgaagcagaactgcagactttcagactagaaaaagaaagtgcgcttgacaagctt
gtccaggacaacttggttaagctaagagatctgatggattcccattctgccgaactcaag
gagcgtgatggacgctcaaaagacatggacgctcgcattacagaacttgcggacgctcgc
tgcaaactagaagtcgaaatggctcttaaagaggctgaaatggaggacatgagactccaa
tacgaagaagccaaaagcactcaggaggaggtgttgaaagcagagtttgctacccaaaca
agcacattgaagatgcagatcgacactttaagcttgcagcttcatcagaagaatgaagag
tatgaggttggtctggccgaacttcgagctctcatgaggttggaaaaggaccattgcatc
tctgaactcgtggatcggcacgaagaagaaagcacgctgcttcgccacgagttttcagca
ctcaagcagaagtcacaggatgtggagaaagactgcgaggaacgagtcctgaagatcgaa
cgcgactacaaggaccgtgtcgatgccttacagagggaaaaggtggaagaacagagagct
tttcaggagaaagaagacgacctacggacagttattggggacctgcaggcagagaactca
ctattgtctggaaggctggagcaggagcgggtggaggccctgctgagggtgcaggaggag
aaagaggaggcagtgaaagctgcgttacaagaggccttaagagacattcaactccaaaaa
gaggagacggagacgagactgttaggacaaattgaactacttgaaaagcagctcaaagac
agacaatctactgatacagtggcatcttctgctgagcagacagaggccggtgttcaggct
gaaactgcagtatcactggacagtggccagtggactgaagagagggcatcactcttggcc
aaactagagctcctggagcgcacaaagaatgaggagatgcagaacctgaagacctcacta
attgctgagcagcagacaaacttcaataccgttctgactcgggagaaactaaagaaagaa
caaatcatcagtgatctcacagagaagctgaaaaacgtgatgcagcagcaagagaaagat
aaaggcctgattgaaacactctcagaggaccgtgcctctatcctccaggagaagaagcag
ctggaggaggaactcaaccgtctgagaagcaccgtcctcgtctcttcgtccttctttcca
cccaatcccatcgtccctgtggtggcggaggctcacggcgcttgcggtcctgcacaagtg
gacgctctctctccatccttccctgacccagagagactgatatccatggctgcgttcaga
gatgaggagagggtggagtctgcagtggaggccagcatgatgacagtgcacagtgacaac
tctatgctttctgaagagaagcagcgcatactgattttggaaaggaccttgcatatgaag
gaggaagagaacaaaagactcagtcaaagattgatgtcacagagtatgtcatccgtttca
tcacggcactcggagaaaatcgccattcgagattttcaggtgggcgacttggtgctcatc
atcctggacgagaggcatgataattatgttctcttcactgttggtcccaccctttatttc
ctgcattcggagtctctcactgcactggacctcaaaccagcgacaggagcaacaagacgg
ccgtgggttctgggaaaagtcatggagaaggaatattgccaagccaaaaaggcccaaaac
cgcttcaaagttcctctcggcaccaaattctacagagtaaaggccgtgccatggaacaag
aaggtgtaa
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integrated database retrieval system
