Danio rerio (zebrafish): 100332196
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Entry
100332196 CDS
T01004
Symbol
gabrb2b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-2 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04080
Neuroactive ligand-receptor interaction
dre04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100332196 (gabrb2b)
04082 Neuroactive ligand signaling
100332196 (gabrb2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
100332196 (gabrb2b)
Ion channels [BR:
dre04040
]
Ligand-gated channels
GABA-A
100332196 (gabrb2b)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
100332196
NCBI-ProteinID:
XP_073791607
ZFIN:
ZDB-GENE-111215-5
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Position
21:45933739..46085562
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AA seq
523 aa
AA seq
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MAIFRIRQKSFARVWTFPVIVAVVCAQSVNDPSNMSLVKETVDRLLKGYDIRLRPDFGGP
PVGVGMNIDIASIDMVSEVNMDYTLTMYFQQAWRDKRLSYSEIPLNLTLDNRVADQLWVP
DTYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIEFYWRGGNHAVTGVERIELPQFSIVDYKLISKNVVFSTGSYPRLSLSFKL
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPK
IPYVKAIDMYLMGCFVFVFLALLEYALVNYIFFGRGPQQQKKAAERASKANNEKMRMDPN
KWLVGNVVQRDDGLYARMKQRDIDAHDSMWEPIFVDDAALGLGDSKNKMDPHENILLTPL
EIKNEMGTSELTLGLGDPRATMLAYDSTTLQYRKAGLARHNFGRNALERHVAQKKSRLRR
RASQLKITIPDLTDVNSIDKWSRMIFPTVFSFFNVVYWLYYVN
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcttcagaataaggcaaaagagcttcgcgcgcgtctggacgtttcccgtgata
gtggccgtggtgtgtgcgcaaagtgtcaatgatccaagcaatatgtctctcgtaaaagaa
actgttgatagactattgaaaggatatgacattcgcttgaggccagattttggaggtcct
ccggtgggagtggggatgaatatagacatagccagtatagacatggtatcagaagtaaat
atggactacacactgactatgtatttccagcaagcctggcgagataaacggctgtcctat
tctgagattcctcttaatctgacgctggataaccgggtggctgatcagctgtgggtgccg
gacacttactttctgaatgataagaagtcatttgtacacggcgtaacagtgaagaacaga
atgatacgtcttcatcctgatggcactgtgctctatggactcaggattactaccacagct
gcctgcatgatggacctgcgcagatacccactagatgagcagaactgtacactggaaatt
gagagctatggctacaccacagatgacattgagttttactggcgaggcggcaaccatgcg
gtaacgggcgttgaaaggattgagcttcctcagttctccatagtggactacaaactcatc
tccaaaaatgttgtgttttctacaggttcataccctcgcctctccctgagcttcaagctt
aagagaaacatcggctacttcatcctgcagacctacatgccttccatcctaatcaccatc
ctatcctgggtatccttctggatcaactatgatgcctcggctgccagggtcgctttaggc
atcaccactgtgctgaccatgaccaccatcaacacacatttgcgggagactcttccgaag
attccatatgtcaaagccattgacatgtacctgatgggctgtttcgtcttcgtcttcctg
gctctgctggagtatgcgctggtcaactacatcttctttggcaggggaccacagcaacag
aagaaagctgcagagagagcctccaaagccaacaatgaaaaaatgagaatggatccaaac
aaatggttggtgggaaatgtagttcagagagacgatggtctgtatgccagaatgaaacag
agggatattgacgcgcatgactccatgtgggaaccaatctttgtggacgatgcagcatta
ggactaggcgattcaaaaaataagatggatccccatgaaaacatccttctcactcctctg
gagatcaaaaatgaaatgggcacatcagagttaaccctgggtttgggtgacccccgtgcg
accatgcttgcctatgacagcaccacactgcagtaccggaaagccggcctggccaggcac
aactttggacgcaatgcgctggaacgccatgttgctcagaagaagagtcgactacggcgg
cgcgcttcccagcttaaaatcaccatccctgacttaactgacgtgaattcgatcgacaaa
tggtcgagaatgatcttccccacagtattttcattcttcaatgttgtctattggctttat
tatgtcaactaa
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