Danio rerio (zebrafish): 100332293
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Entry
100332293 CDS
T01004
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04136
Autophagy - other
dre04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100332293
04136 Autophagy - other
100332293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dre04131
]
100332293
03029 Mitochondrial biogenesis [BR:
dre03029
]
100332293
Membrane trafficking [BR:
dre04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
100332293
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100332293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WD40_MABP1-WDR62_2nd
WD40_Prp19
ANAPC4_WD40
WDR55
Beta-prop_RSE1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
RMC1_N
Motif
Other DBs
NCBI-GeneID:
100332293
NCBI-ProteinID:
XP_017213982
UniProt:
A0A8M6Z1D2
LinkDB
All DBs
Position
12:complement(1038435..1054296)
Genome browser
AA seq
451 aa
AA seq
DB search
MFKPIPEFGTEERLRGSDTSPEKVRPERPERLHCASFNQDTTSLVVGDRNGYRLFSLSSV
DRMDCIHRGTESSDVCIAERLFSSSLMVVVSKSTPFTMNIYHFKKGTEICNYSYSSSILA
LKLNRQRLIVCLEEALYIHNIKDMKLLKSLLNTPPNPKGLCALSVSHSSAYLAYPGSFTA
GEITLYDALSLSPVGVISAHASHVAGISFSASGSRMATASEKGTVIRVFSVPDGVRLFEF
RRGLKRYVSISSLSFSADEQLLCVSSNTETVHVFKLEHHSPNQDSPSWSAYIGKVFSAAS
TYLPSQVSDMMHQDRAFATVHLSQSGGRNISALSTIQKVPRLLVASSDGHLYIYNVNLQD
GGDCRLVQKHRLFERADEALVASDLHVETPSYAETVATNTNQDSTPSSSLTGYSEDGGLR
RGELIPDHEFEDGPLRLDDEQEFPPVSFRNS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaccgataccggagttcggaaccgaagagaggctgcgcggctcagatacgtcc
ccggaaaaagtgagacctgagcggcctgagagactccactgcgcctccttcaaccaggac
acaacgtctctggttgttggtgataggaatggctacaggcttttctctctgtcgtctgtg
gacagaatggactgcattcatcgcggcaccgagagctctgatgtgtgtattgctgagcgg
ctcttctccagcagtctgatggtggtggtcagtaaatctactccatttaccatgaacatt
taccactttaagaagggcacagagatctgcaactacagctactccagcagcatcctcgcc
ctcaaactcaaccgacagagactcatagtgtgtttggaggaggctttgtacatccacaac
atcaaggacatgaaacttctcaagtcactcctcaacacgccaccaaaccccaaaggtctc
tgtgctctgtctgtcagtcattccagtgcatatctagcgtatccgggcagcttcaccgct
ggagaaatcactctctatgatgctctcagtctgagtcccgtgggtgtgatttctgctcac
gccagtcacgtggccggcatctccttcagcgcttcaggatccaggatggccaccgcttca
gaaaaaggaacggtgatcagagtgttcagtgttcctgatggagtccgactctttgagttt
cgcagaggactcaagaggtacgtgagcatcagttctctgtcgttcagcgcagatgaacag
cttctgtgtgtttccagcaacaccgagacggttcacgtcttcaaactggagcatcacagt
cccaatcaggattctccatcctggtctgcgtacatagggaaggtgttttccgccgccagc
acgtacctgccgtctcaggtgtcagatatgatgcatcaggaccgagcgttcgccactgtt
cacctcagccaatccggcggcaggaacatttcagctctgtccacgatccagaaggttcct
cgactgctggtggcttcatcagacggtcatctctacatctataatgtgaatctgcaggat
ggtggagactgtcgtttagtccagaagcacagactgtttgaaagggcagatgaagctctg
gtggcgtcagatttacatgtggaaactccatcatatgctgaaactgttgccacaaacaca
aaccaggactctacaccttccagttcactcacaggttactctgaggatggaggattgagg
agaggagaactgatcccagatcatgagtttgaggacggaccgctgcgtctggatgatgag
caggagtttcctccggtcagcttcaggaacagctga
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